FFCP PHASE1:Hg19::chr19:3557930..3557939,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=-359bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |association_with_transcript=-359bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | ||
|cluster_id=chr19:3557930..3557939,- | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_12_at_MFSD12_5end | |description=CAGE_peak_12_at_MFSD12_5end | ||
|id=chr19:3557930..3557939,- | |id=chr19:3557930..3557939,- | ||
|ontology_enrichment_celltype=CL:0000148!4.53e-33!10;CL:0000541!4.53e-33!10;CL:0002150!4.74e-28!3;CL:0000861!4.74e-28!3;CL:0000147!1.58e-23!14;CL:0000710!2.36e-16!20;CL:0002567!1.25e-13!3;CL:0000075!5.31e-12!27;CL:0000325!5.27e-11!39;CL:0002566!8.95e-11!1;CL:0002077!9.80e-10!33;CL:0000235!8.05e-09!10;CL:0000066!1.56e-07!254;CL:0000333!2.34e-07!41 | |ontology_enrichment_celltype=CL:0000148!4.53e-33!10;CL:0000541!4.53e-33!10;CL:0002150!4.74e-28!3;CL:0000861!4.74e-28!3;CL:0000147!1.58e-23!14;CL:0000710!2.36e-16!20;CL:0002567!1.25e-13!3;CL:0000075!5.31e-12!27;CL:0000325!5.27e-11!39;CL:0002566!8.95e-11!1;CL:0002077!9.80e-10!33;CL:0000235!8.05e-09!10;CL:0000066!1.56e-07!254;CL:0000333!2.34e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.47e-82;10!CL:0000147;9.22e-59;14!CL:0002567;7.81e-45;3!CL:0000710;2.26e-41;20!CL:0002566;3.05e-34;1!CL:0000075;7.79e-31;27!CL:0002077;5.52e-23;34!CL:0002521;2.19e-12;3!CL:0000149;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.04e-82,10;CL:0000541,7.04e-82,10;CL:0000147,9.79e-59,14;CL:0002567,6.25e-45,3;CL:0000710,2.35e-41,20;CL:0002566,5.05e-34,1;CL:0000075,8.03e-31,27;CL:0002077,1.30e-24,34;CL:0000333,1.37e-19,41;CL:0000133,5.71e-14,59;CL:0002521,2.07e-12,3;CL:0000221,1.34e-11,72;CL:0000149,1.70e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.94e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!8.59e-19!2;DOID:0050687!4.41e-07!143;DOID:305!5.67e-07!106 | |ontology_enrichment_disease=DOID:1909!8.59e-19!2;DOID:0050687!4.41e-07!143;DOID:305!5.67e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.42e-47!9;UBERON:0001557!3.08e-22!19;UBERON:0008947!8.78e-11!38;UBERON:0003258!8.78e-11!38;UBERON:0000072!8.77e-09!46;UBERON:0000065!1.58e-07!53 | |ontology_enrichment_uberon=UBERON:0001737!1.42e-47!9;UBERON:0001557!3.08e-22!19;UBERON:0008947!8.78e-11!38;UBERON:0003258!8.78e-11!38;UBERON:0000072!8.77e-09!46;UBERON:0000065!1.58e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.19e-12;3!UBERON:0002072;5.92e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.07e-12,3;UBERON:0002072,5.73e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.220587945464788,0.653638332277218,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22242630022592,2.67391897890794,2.34434894420094,0,1.85089486865982,1.20137223137567,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980446171670911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870806981601766,0.950161122120412,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.220587945464788,0.653638332277218,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22242630022592,2.67391897890794,2.34434894420094,0,1.85089486865982,1.20137223137567,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980446171670911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870806981601766,0.950161122120412,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@MFSD12 | |short_description=p12@MFSD12 | ||
}} | }} |
Latest revision as of 09:45, 17 September 2015
Short description: | p12@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -359bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.04e-82 | 10 |
melanoblast | 7.04e-82 | 10 |
pigment cell | 9.79e-59 | 14 |
light melanocyte | 6.25e-45 | 3 |
neurecto-epithelial cell | 2.35e-41 | 20 |
dark melanocyte | 5.05e-34 | 1 |
columnar/cuboidal epithelial cell | 8.03e-31 | 27 |
ecto-epithelial cell | 1.30e-24 | 34 |
migratory neural crest cell | 1.37e-19 | 41 |
neurectodermal cell | 5.71e-14 | 59 |
subcutaneous fat cell | 2.07e-12 | 3 |
ectodermal cell | 1.34e-11 | 72 |
visual pigment cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.07e-12 | 3 |
hypodermis | 5.73e-08 | 5 |