FFCP PHASE1:Hg19::chr19:3557867..3557877,-: Difference between revisions
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|id=chr19:3557867..3557877,-
|short_description=p7@MFSD12
|description=CAGE_peak_7_at_MFSD12_5end
|association_with_transcript=-296bp_to_ENST00000355415,ENST0000038...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=-296bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |||
|cluster_id=chr19:3557867..3557877,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_7_at_MFSD12_5end | |||
|id=chr19:3557867..3557877,- | |||
|ontology_enrichment_celltype=CL:0000148!1.51e-38!10;CL:0000541!1.51e-38!10;CL:0000147!2.47e-27!14;CL:0002567!5.86e-25!3;CL:0002150!4.23e-24!3;CL:0000861!4.23e-24!3;CL:0000710!6.62e-19!20;CL:0000075!8.50e-14!27;CL:0002077!3.87e-11!33;CL:0002566!2.22e-09!1;CL:0000325!2.69e-09!39;CL:0000333!2.36e-08!41;CL:0000235!1.34e-07!10;CL:0000066!1.44e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.38e-137;10!CL:0000147;4.60e-98;14!CL:0002567;2.28e-85;3!CL:0000710;7.68e-69;20!CL:0000075;3.82e-51;27!CL:0002077;8.69e-36;34!CL:0002566;2.37e-29;1!CL:0000149;2.61e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.38e-137,10;CL:0000541,5.38e-137,10;CL:0000147,4.60e-98,14;CL:0002567,2.28e-85,3;CL:0000710,7.68e-69,20;CL:0000075,3.82e-51,27;CL:0002077,1.01e-40,34;CL:0000333,2.68e-32,41;CL:0002566,2.37e-29,1;CL:0000133,6.93e-23,59;CL:0000221,6.34e-19,72;CL:0000149,2.61e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.87e-12;59!CL:0000221;3.04e-10;72 | |||
|ontology_enrichment_disease=DOID:1909!2.77e-16!2;DOID:305!2.95e-08!106;DOID:0050687!6.70e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.16e-52!9;UBERON:0001557!1.87e-24!19;UBERON:0008947!8.55e-15!38;UBERON:0003258!8.55e-15!38;UBERON:0000072!5.42e-12!46;UBERON:0000065!3.11e-10!53;UBERON:0001004!3.48e-07!72 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p7@MFSD12 | |||
}} | }} |
Latest revision as of 09:45, 17 September 2015
Short description: | p7@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -296bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.38e-137 | 10 |
melanoblast | 5.38e-137 | 10 |
pigment cell | 4.60e-98 | 14 |
light melanocyte | 2.28e-85 | 3 |
neurecto-epithelial cell | 7.68e-69 | 20 |
columnar/cuboidal epithelial cell | 3.82e-51 | 27 |
ecto-epithelial cell | 1.01e-40 | 34 |
migratory neural crest cell | 2.68e-32 | 41 |
dark melanocyte | 2.37e-29 | 1 |
neurectodermal cell | 6.93e-23 | 59 |
ectodermal cell | 6.34e-19 | 72 |
visual pigment cell | 2.61e-08 | 4 |