FFCP PHASE1:Hg19::chr19:3557823..3557843,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:3557823..3557843,-
|short_description=p5@MFSD12
|description=CAGE_peak_5_at_MFSD12_5end
|association_with_transcript=-252bp_to_ENST00000355415,ENST0000038...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=-252bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |||
|cluster_id=chr19:3557823..3557843,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_5_at_MFSD12_5end | |||
|id=chr19:3557823..3557843,- | |||
|ontology_enrichment_celltype=CL:0000148!4.75e-21!10;CL:0000541!4.75e-21!10;CL:0000147!1.00e-14!14;CL:0000235!2.05e-14!10;CL:0002567!3.34e-14!3;CL:0002150!1.01e-13!3;CL:0000861!1.01e-13!3;CL:0000990!3.81e-11!8;CL:0000710!5.58e-10!20;CL:0000451!4.58e-09!10;CL:0000325!2.21e-07!39;CL:0002077!3.28e-07!33;CL:0000075!4.10e-07!27;CL:0000840!7.60e-07!5;CL:0001029!7.60e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000148;7.29e-75;10!CL:0000147;1.93e-53;14!CL:0002567;2.96e-47;3!CL:0000710;2.38e-37;20!CL:0000075;1.34e-27;27!CL:0002077;2.61e-19;34!CL:0002566;8.86e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.30e-75,10;CL:0000541,7.30e-75,10;CL:0000147,1.94e-53,14;CL:0002567,2.96e-47,3;CL:0000710,2.38e-37,20;CL:0000075,1.34e-27,27;CL:0002077,7.50e-22,34;CL:0000333,3.35e-17,41;CL:0002566,8.86e-17,1;CL:0000133,5.32e-12,59;CL:0000221,8.27e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;7.86e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!9.64e-10!2;DOID:0050687!1.58e-08!143;DOID:305!3.04e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1909;6.41e-31;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.71e-31,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.12e-36!9;UBERON:0001557!7.69e-24!19;UBERON:0000072!4.57e-12!46;UBERON:0008947!6.34e-11!38;UBERON:0003258!6.34e-11!38;UBERON:0000065!4.18e-10!53;UBERON:0001004!6.80e-08!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.25e-07;9!UBERON:0001557;1.25e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.38e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0.97364218096405,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,1.01150814046861,0.482022059766964,0.661763836394364,0.435758888184812,0.949082476444386,0.943819157121151,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,23.303727205226,88.6213147295204,71.5026427981287,66.718253948855,38.6631372564496,12.9147514872885,19.4361974188793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,1.64485763191445,2.63121541510268,0.985385484638511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0.97364218096405,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0647612003586,1.01150814046861,0.482022059766964,0.661763836394364,0.435758888184812,0.949082476444386,0.943819157121151,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,23.303727205226,88.6213147295204,71.5026427981287,66.718253948855,38.6631372564496,12.9147514872885,19.4361974188793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,1.64485763191445,2.63121541510268,0.985385484638511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51649117541648,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p5@MFSD12 | |||
}} | }} |
Latest revision as of 09:43, 17 September 2015
Short description: | p5@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -252bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 7.30e-75 | 10 |
melanoblast | 7.30e-75 | 10 |
pigment cell | 1.94e-53 | 14 |
light melanocyte | 2.96e-47 | 3 |
neurecto-epithelial cell | 2.38e-37 | 20 |
columnar/cuboidal epithelial cell | 1.34e-27 | 27 |
ecto-epithelial cell | 7.50e-22 | 34 |
migratory neural crest cell | 3.35e-17 | 41 |
dark melanocyte | 8.86e-17 | 1 |
neurectodermal cell | 5.32e-12 | 59 |
ectodermal cell | 8.27e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.38e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.71e-31 | 2 |