FFCP PHASE1:Hg19::chr19:35521324..35521335,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:35521324..35521335,+ to FFCP PHASE1:Hg19::chr19:35521324..35521335,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-198bp_to_uc002nxo.1,uc002nxp.2,uc010xsg.1_5end | |||
|cluster_id=chr19:35521324..35521335,+ | |||
|description=CAGE_peak_7_at_SCN1B_5end | |||
|id=chr19:35521324..35521335,+ | |||
|ontology_enrichment_celltype=CL:0000213!1.47e-08!57;CL:0000215!1.47e-08!57;CL:0002139!6.53e-08!24;CL:0000115!6.90e-08!35;CL:0002078!2.10e-07!44;CL:0000222!4.74e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.13e-08;3!CL:1000413;1.64e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,4.88e-09,3;CL:1000413,2.57e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.11e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-24!115;UBERON:0004111!3.20e-19!241;UBERON:0001049!3.17e-18!57;UBERON:0005068!3.17e-18!57;UBERON:0006241!3.17e-18!57;UBERON:0007135!3.17e-18!57;UBERON:0000477!4.05e-18!286;UBERON:0000025!6.18e-18!194;UBERON:0003075!7.72e-17!86;UBERON:0007284!7.72e-17!86;UBERON:0002616!1.21e-15!59;UBERON:0000483!3.21e-15!309;UBERON:0002346!5.11e-15!90;UBERON:0000119!1.37e-14!312;UBERON:0000955!1.50e-14!69;UBERON:0006238!1.50e-14!69;UBERON:0001017!2.29e-13!82;UBERON:0005743!3.02e-13!86;UBERON:0003080!3.91e-13!42;UBERON:0002780!1.16e-12!41;UBERON:0001890!1.16e-12!41;UBERON:0006240!1.16e-12!41;UBERON:0000073!2.32e-11!94;UBERON:0001016!2.32e-11!94;UBERON:0001893!5.11e-11!34;UBERON:0002020!7.15e-11!34;UBERON:0003528!7.15e-11!34;UBERON:0002791!2.50e-10!33;UBERON:0000467!3.72e-10!625;UBERON:0001869!3.84e-10!32;UBERON:0000468!4.75e-10!659;UBERON:0000480!5.16e-10!626;UBERON:0000033!6.37e-09!123;UBERON:0003056!6.92e-09!61;UBERON:0000055!1.22e-08!69;UBERON:0000475!1.74e-08!365;UBERON:0000153!3.81e-08!129;UBERON:0007811!3.81e-08!129;UBERON:0000481!5.10e-08!347;UBERON:0002049!6.08e-08!79;UBERON:0007798!6.08e-08!79;UBERON:0002619!1.34e-07!22;UBERON:0001009!5.08e-07!113;UBERON:0003914!9.80e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.32e-20;22!UBERON:0001950;6.45e-19;20!UBERON:0002780;1.95e-18;41!UBERON:0001890;1.95e-18;41!UBERON:0001869;4.86e-18;32!UBERON:0001893;7.01e-18;34!UBERON:0000956;4.61e-17;25!UBERON:0000203;4.61e-17;25!UBERON:0002791;5.11e-16;32!UBERON:0003528;1.34e-15;34!UBERON:0002020;1.34e-15;34!UBERON:0000073;6.63e-15;53!UBERON:0002616;6.63e-15;53!UBERON:0000200;1.15e-11;6!UBERON:0001017;9.94e-11;75!UBERON:0000955;3.64e-10;68!UBERON:0007023;1.06e-08;114!UBERON:0001870;1.13e-08;3!UBERON:0001016;7.80e-08;83!UBERON:0003915;1.64e-07;9!UBERON:0004700;1.64e-07;9!UBERON:0001917;1.64e-07;9!UBERON:0002680;1.81e-07;9!UBERON:0001895;1.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.50e-29,53;UBERON:0002616,3.50e-29,53;UBERON:0001049,3.06e-27,56;UBERON:0005068,3.06e-27,56;UBERON:0006241,3.06e-27,56;UBERON:0007135,3.06e-27,56;UBERON:0002780,5.58e-25,41;UBERON:0001890,5.58e-25,41;UBERON:0003080,5.58e-25,41;UBERON:0006240,5.58e-25,41;UBERON:0000955,9.67e-25,68;UBERON:0006238,9.67e-25,68;UBERON:0007023,1.36e-22,114;UBERON:0001017,2.50e-21,81;UBERON:0001893,2.53e-20,34;UBERON:0002619,1.26e-19,22;UBERON:0001869,1.86e-19,32;UBERON:0001950,9.12e-19,20;UBERON:0001016,1.97e-18,89;UBERON:0003528,7.65e-18,34;UBERON:0002020,7.65e-18,34;UBERON:0003075,8.51e-18,82;UBERON:0007284,8.51e-18,82;UBERON:0000956,6.00e-17,25;UBERON:0000203,6.00e-17,25;UBERON:0002791,6.58e-17,32;UBERON:0002346,1.25e-16,86;UBERON:0000025,2.85e-15,192;UBERON:0003056,5.49e-15,61;UBERON:0010314,2.84e-14,132;UBERON:0010371,1.02e-13,104;UBERON:0004111,1.24e-11,240;UBERON:0000200,1.26e-11,6;UBERON:0000483,4.37e-09,306;UBERON:0001870,5.89e-09,3;UBERON:0000119,6.94e-09,309;UBERON:0002680,1.09e-07,9;UBERON:0001895,1.09e-07,9;UBERON:0010092,1.09e-07,9;UBERON:0004121,1.57e-07,171;UBERON:0000924,1.57e-07,171;UBERON:0006601,1.57e-07,171;UBERON:0003915,2.57e-07,9;UBERON:0004700,2.57e-07,9;UBERON:0001917,2.57e-07,9 | |||
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| ||
|short_description=p7@SCN1B | |||
}} | }} |
Latest revision as of 09:24, 17 September 2015
Short description: | p7@SCN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SCN1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -198bp_to_uc002nxo.1, uc002nxp.2, uc010xsg.1_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 4.88e-09 | 3 |
endothelial cell of artery | 2.57e-07 | 9 |