FFCP PHASE1:Hg19::chr1:154407451..154407458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000507256_5end | |association_with_transcript=-27bp_to_ENST00000507256_5end | ||
|cluster_id=chr1:154407451..154407458,+ | |||
|description=CAGE_peak_18_at_IL6R_5end | |description=CAGE_peak_18_at_IL6R_5end | ||
|id=chr1:154407451..154407458,+ | |id=chr1:154407451..154407458,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.04e-34;2!CL:0001016;5.04e-34;2!CL:0000453;1.60e-14;5!CL:0000840;2.45e-12;5!CL:0000990;1.12e-08;8!CL:0000451;2.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0000453,1.60e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000990,1.12e-08,8;CL:0000451,2.47e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.13e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!5.50e-21!11;UBERON:0007023!1.25e-17!115;UBERON:0003101!2.81e-16!22;UBERON:0000079!2.81e-16!22;UBERON:0006947!6.66e-16!3;UBERON:0004054!6.66e-16!3;UBERON:0000473!5.55e-15!8;UBERON:0005156!2.59e-13!59;UBERON:0000990!2.59e-13!59;UBERON:0003133!1.84e-12!48;UBERON:0005904!4.72e-12!4;UBERON:0004175!3.74e-09!25;UBERON:0000991!9.26e-08!21;UBERON:0009196!9.26e-08!21;UBERON:0009117!9.26e-08!21;UBERON:0005564!9.26e-08!21;UBERON:0004176!2.22e-07!22;UBERON:0006834!9.91e-07!1 | |ontology_enrichment_uberon=UBERON:0003135!5.50e-21!11;UBERON:0007023!1.25e-17!115;UBERON:0003101!2.81e-16!22;UBERON:0000079!2.81e-16!22;UBERON:0006947!6.66e-16!3;UBERON:0004054!6.66e-16!3;UBERON:0000473!5.55e-15!8;UBERON:0005156!2.59e-13!59;UBERON:0000990!2.59e-13!59;UBERON:0003133!1.84e-12!48;UBERON:0005904!4.72e-12!4;UBERON:0004175!3.74e-09!25;UBERON:0000991!9.26e-08!21;UBERON:0009196!9.26e-08!21;UBERON:0009117!9.26e-08!21;UBERON:0005564!9.26e-08!21;UBERON:0004176!2.22e-07!22;UBERON:0006834!9.91e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.39e-66;1!UBERON:0000995;1.27e-16;17!UBERON:0003975;9.05e-16;18!UBERON:0004175;1.09e-13;21!UBERON:0000002;2.45e-12;6!UBERON:0001560;2.45e-12;6!UBERON:0003134;1.25e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.23e-66,1;UBERON:0000995,1.09e-13,21;UBERON:0005795,4.01e-13,22;UBERON:0003975,4.01e-13,22;UBERON:0000002,2.74e-12,6;UBERON:0001560,2.74e-12,6;UBERON:0004175,1.09e-11,25;UBERON:0003134,2.92e-08,37;UBERON:0000474,2.92e-08,37;UBERON:0003100,1.47e-07,41 | |||
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|short_description=p18@IL6R | |short_description=p18@IL6R | ||
}} | }} |
Latest revision as of 09:24, 17 September 2015
Short description: | p18@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_IL6R_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000507256_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
Langerhans cell | 1.60e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
conventional dendritic cell | 1.12e-08 | 8 |
dendritic cell | 2.47e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.23e-66 | 1 |
uterus | 1.09e-13 | 21 |
embryonic uterus | 4.01e-13 | 22 |
internal female genitalia | 4.01e-13 | 22 |
uterine cervix | 2.74e-12 | 6 |
neck of organ | 2.74e-12 | 6 |
internal genitalia | 1.09e-11 | 25 |
female reproductive organ | 2.92e-08 | 37 |
female reproductive system | 2.92e-08 | 37 |
female organism | 1.47e-07 | 41 |