FFCP PHASE1:Hg19::chr1:154401791..154401807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000476006_5end | |association_with_transcript=-11bp_to_ENST00000476006_5end | ||
|cluster_id=chr1:154401791..154401807,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_11_at_IL6R_5end | |description=CAGE_peak_11_at_IL6R_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!2.90e-22!10;CL:0000541!2.90e-22!10;CL:0000147!1.33e-15!14;CL:0002567!7.19e-15!3;CL:0002057!9.50e-15!42;CL:0000860!1.41e-13!45;CL:0000710!1.34e-10!20;CL:0000839!7.05e-09!70;CL:0002194!1.00e-08!63;CL:0000576!1.00e-08!63;CL:0000040!1.00e-08!63;CL:0000559!1.00e-08!63;CL:0000557!1.03e-08!71;CL:0002009!2.22e-08!65;CL:0000766!5.85e-08!76;CL:0000075!1.41e-07!27 | |ontology_enrichment_celltype=CL:0000148!2.90e-22!10;CL:0000541!2.90e-22!10;CL:0000147!1.33e-15!14;CL:0002567!7.19e-15!3;CL:0002057!9.50e-15!42;CL:0000860!1.41e-13!45;CL:0000710!1.34e-10!20;CL:0000839!7.05e-09!70;CL:0002194!1.00e-08!63;CL:0000576!1.00e-08!63;CL:0000040!1.00e-08!63;CL:0000559!1.00e-08!63;CL:0000557!1.03e-08!71;CL:0002009!2.22e-08!65;CL:0000766!5.85e-08!76;CL:0000075!1.41e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.38e-137;10!CL:0000147;4.60e-98;14!CL:0002567;6.24e-85;3!CL:0000710;7.67e-69;20!CL:0000075;3.81e-51;27!CL:0002077;8.38e-36;34!CL:0002566;2.73e-29;1!CL:0000149;2.35e-08;4 | |ontology_enrichment_celltype_v019=CL:0000148;5.38e-137;10!CL:0000147;4.60e-98;14!CL:0002567;6.24e-85;3!CL:0000710;7.67e-69;20!CL:0000075;3.81e-51;27!CL:0002077;8.38e-36;34!CL:0002566;2.73e-29;1!CL:0000149;2.35e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.38e-137,10;CL:0000541,5.38e-137,10;CL:0000147,4.60e-98,14;CL:0002567,7.21e-85,3;CL:0000710,7.68e-69,20;CL:0000075,3.82e-51,27;CL:0002077,1.01e-40,34;CL:0000333,2.68e-32,41;CL:0002566,4.20e-29,1;CL:0000133,6.93e-23,59;CL:0000221,6.34e-19,72;CL:0000149,2.26e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;2.89e-12;59!CL:0000221;2.95e-10;72 | |ontology_enrichment_development_v019=CL:0000133;2.89e-12;59!CL:0000221;2.95e-10;72 | ||
|ontology_enrichment_disease=DOID:1909!3.63e-10!2 | |ontology_enrichment_disease=DOID:1909!3.63e-10!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.01e-07!80 | |ontology_enrichment_uberon=UBERON:0002371!2.01e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p11@IL6R | |short_description=p11@IL6R | ||
}} | }} |
Latest revision as of 09:21, 17 September 2015
Short description: | p11@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_IL6R_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -11bp_to_ENST00000476006_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.38e-137 | 10 |
melanoblast | 5.38e-137 | 10 |
pigment cell | 4.60e-98 | 14 |
light melanocyte | 7.21e-85 | 3 |
neurecto-epithelial cell | 7.68e-69 | 20 |
columnar/cuboidal epithelial cell | 3.82e-51 | 27 |
ecto-epithelial cell | 1.01e-40 | 34 |
migratory neural crest cell | 2.68e-32 | 41 |
dark melanocyte | 4.20e-29 | 1 |
neurectodermal cell | 6.93e-23 | 59 |
ectodermal cell | 6.34e-19 | 72 |
visual pigment cell | 2.26e-08 | 4 |