FFCP PHASE1:Hg19::chr2:44588624..44588640,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:44588624..44588640,-
|short_description=p1@PREPL
|description=CAGE_peak_1_at_PREPL_5end
|association_with_transcript=0bp_to_ENST00000409936,ENST00000438314...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9581 | |EntrezGene=9581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30228 | |HGNC=30228 | ||
|TSSclassifier=strong | |||
|UniProt=Q4J6C6,C9JMT4 | |UniProt=Q4J6C6,C9JMT4 | ||
|association_with_transcript=0bp_to_ENST00000409936,ENST00000438314,uc002rui.3,uc010fax.2_5end | |||
|cluster_id=chr2:44588624..44588640,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_PREPL_5end | |||
|id=chr2:44588624..44588640,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.22e-10;82!UBERON:0002532;4.36e-07;206!UBERON:0010316;4.36e-07;206 | |||
|ontology_enrichment_disease=DOID:0050687!9.83e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.83e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-31!115;UBERON:0001049!3.67e-25!57;UBERON:0005068!3.67e-25!57;UBERON:0006241!3.67e-25!57;UBERON:0007135!3.67e-25!57;UBERON:0000073!5.30e-24!94;UBERON:0001016!5.30e-24!94;UBERON:0005743!6.83e-23!86;UBERON:0001017!8.72e-23!82;UBERON:0002780!6.32e-22!41;UBERON:0001890!6.32e-22!41;UBERON:0006240!6.32e-22!41;UBERON:0003080!7.56e-22!42;UBERON:0000955!9.34e-21!69;UBERON:0006238!9.34e-21!69;UBERON:0002616!7.17e-20!59;UBERON:0001893!1.10e-17!34;UBERON:0002020!1.24e-17!34;UBERON:0003528!1.24e-17!34;UBERON:0002791!5.11e-17!33;UBERON:0003075!7.77e-17!86;UBERON:0007284!7.77e-17!86;UBERON:0001869!1.35e-16!32;UBERON:0002346!1.37e-16!90;UBERON:0002619!1.14e-14!22;UBERON:0003056!1.12e-13!61;UBERON:0001950!1.90e-13!20;UBERON:0000153!2.31e-13!129;UBERON:0007811!2.31e-13!129;UBERON:0000956!2.64e-12!25;UBERON:0000203!2.64e-12!25;UBERON:0000033!5.13e-12!123;UBERON:0000924!4.32e-11!173;UBERON:0006601!4.32e-11!173;UBERON:0004121!4.81e-11!169;UBERON:0002420!5.05e-07!9;UBERON:0007245!5.05e-07!9;UBERON:0010009!5.05e-07!9;UBERON:0010011!5.05e-07!9;UBERON:0000454!5.05e-07!9;UBERON:0002308!6.45e-07!9;UBERON:0000125!6.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.25e-16;41!UBERON:0001890;7.25e-16;41!UBERON:0001893;3.79e-15;34!UBERON:0003528;4.69e-15;34!UBERON:0002020;4.69e-15;34!UBERON:0001869;6.76e-15;32!UBERON:0002791;8.52e-15;32!UBERON:0002619;1.07e-14;22!UBERON:0000073;4.58e-14;53!UBERON:0002616;4.58e-14;53!UBERON:0001950;1.78e-13;20!UBERON:0000956;2.41e-12;25!UBERON:0000203;2.41e-12;25!UBERON:0001017;1.94e-10;75!UBERON:0001016;7.20e-10;83!UBERON:0000955;9.70e-10;68!UBERON:0007023;4.40e-09;114!UBERON:0002420;5.03e-07;9!UBERON:0007245;5.03e-07;9!UBERON:0010009;5.03e-07;9!UBERON:0010011;5.03e-07;9!UBERON:0000454;5.03e-07;9!UBERON:0000125;6.42e-07;9!UBERON:0002308;6.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.15e-31,114;UBERON:0001049,3.42e-25,56;UBERON:0005068,3.42e-25,56;UBERON:0006241,3.42e-25,56;UBERON:0007135,3.42e-25,56;UBERON:0001016,8.43e-24,89;UBERON:0000073,1.89e-23,53;UBERON:0002616,1.89e-23,53;UBERON:0001017,9.82e-23,81;UBERON:0002780,6.32e-22,41;UBERON:0001890,6.32e-22,41;UBERON:0003080,6.32e-22,41;UBERON:0006240,6.32e-22,41;UBERON:0000955,1.02e-20,68;UBERON:0006238,1.02e-20,68;UBERON:0001893,1.10e-17,34;UBERON:0003528,1.24e-17,34;UBERON:0002020,1.24e-17,34;UBERON:0003075,2.62e-17,82;UBERON:0007284,2.62e-17,82;UBERON:0002346,5.05e-17,86;UBERON:0001869,1.35e-16,32;UBERON:0002791,1.82e-16,32;UBERON:0002619,1.14e-14,22;UBERON:0003056,4.33e-14,61;UBERON:0011216,5.71e-14,223;UBERON:0001950,1.90e-13,20;UBERON:0000956,2.64e-12,25;UBERON:0000203,2.64e-12,25;UBERON:0010371,5.67e-12,104;UBERON:0004121,1.85e-11,171;UBERON:0000924,1.85e-11,171;UBERON:0006601,1.85e-11,171;UBERON:0010314,1.22e-10,132;UBERON:0002420,5.05e-07,9;UBERON:0007245,5.05e-07,9;UBERON:0010009,5.05e-07,9;UBERON:0010011,5.05e-07,9;UBERON:0000454,5.05e-07,9;UBERON:0000125,6.45e-07,9;UBERON:0002308,6.45e-07,9 | |||
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| ||
|short_description=p1@PREPL | |||
}} | }} |
Latest revision as of 09:10, 17 September 2015
Short description: | p1@PREPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PREPL_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000409936, ENST00000438314, uc002rui.3, uc010fax.2_5end |
EntrezGene: | PREPL |
HGNC: | 30228 |
UniProt: | Q4J6C6C9JMT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.83e-08 | 143 |