FFCP PHASE1:Hg19::chr1:154377802..154377834,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154377802..154377834,+ to FFCP PHASE1:Hg19::chr1:154377802..154377834,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=103bp_to_ENST00000344086_5end | |||
|cluster_id=chr1:154377802..154377834,+ | |||
|description=CAGE_peak_4_at_IL6R_5end | |||
|id=chr1:154377802..154377834,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.07e-33!182;CL:0000037!6.56e-32!172;CL:0000566!6.56e-32!172;CL:0000738!1.63e-30!140;CL:0002032!9.44e-30!165;CL:0000837!9.44e-30!165;CL:0002087!4.43e-26!119;CL:0002031!8.29e-25!124;CL:0000763!1.09e-24!112;CL:0000049!1.09e-24!112;CL:0000766!9.66e-24!76;CL:0000557!1.37e-22!71;CL:0002057!1.00e-21!42;CL:0002009!1.30e-21!65;CL:0002194!1.33e-21!63;CL:0000576!1.33e-21!63;CL:0000040!1.33e-21!63;CL:0000559!1.33e-21!63;CL:0000839!4.76e-21!70;CL:0000860!8.11e-21!45;CL:0000791!8.89e-08!18;CL:0000789!8.89e-08!18;CL:0002420!8.89e-08!18;CL:0002419!8.89e-08!18;CL:0000790!8.89e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-25;33!CL:0002057;1.77e-25;33!CL:0000576;1.69e-20;48!CL:0000473;1.68e-18;39!CL:0000234;1.68e-18;39!CL:0000766;1.24e-14;69!CL:0002087;8.59e-12;104!CL:0000791;4.01e-11;18!CL:0000789;4.01e-11;18!CL:0002419;4.01e-11;18!CL:0000763;1.26e-10;100!CL:0000084;2.07e-08;25!CL:0000738;4.38e-08;136!CL:0000988;5.09e-08;177!CL:0000624;4.43e-07;6!CL:0000625;6.70e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.87e-44,177;CL:0000037,1.64e-42,168;CL:0000738,2.28e-40,136;CL:0002032,3.57e-39,161;CL:0000837,3.57e-39,161;CL:0002087,6.57e-34,115;CL:0002031,4.42e-32,120;CL:0000763,8.45e-31,108;CL:0000049,8.45e-31,108;CL:0000766,2.58e-29,72;CL:0000860,4.50e-28,42;CL:0002057,4.50e-28,42;CL:0000557,5.34e-27,67;CL:0002194,4.86e-26,59;CL:0000576,4.86e-26,59;CL:0000040,4.86e-26,59;CL:0000559,4.86e-26,59;CL:0002009,9.19e-26,61;CL:0000473,2.69e-25,48;CL:0000234,2.69e-25,48;CL:0000839,5.67e-25,66;CL:0000791,3.13e-11,18;CL:0000789,3.13e-11,18;CL:0002420,3.13e-11,18;CL:0002419,3.13e-11,18;CL:0000790,3.13e-11,18;CL:0000838,1.90e-08,52;CL:0000084,2.18e-08,25;CL:0000827,2.18e-08,25;CL:0000542,4.14e-08,53;CL:0000051,4.14e-08,53;CL:0000624,4.45e-07,6;CL:0000625,5.26e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-20;42!CL:0000790;4.01e-11;18!CL:0000049;4.37e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.42e-29!102;UBERON:0003061!5.42e-29!102;UBERON:0002193!3.87e-26!112;UBERON:0002371!1.56e-20!80;UBERON:0001474!8.79e-18!86;UBERON:0002405!1.56e-17!115;UBERON:0004765!4.16e-14!101;UBERON:0001434!4.16e-14!101;UBERON:0007023!5.59e-13!115;UBERON:0000178!1.14e-08!15;UBERON:0000179!1.14e-08!15;UBERON:0000463!1.14e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.12e-11;15!UBERON:0000179;1.12e-11;15!UBERON:0000463;1.12e-11;15!UBERON:0002390;1.49e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.69e-36,98;UBERON:0003061,5.69e-36,98;UBERON:0002193,2.33e-32,108;UBERON:0002371,1.22e-24,76;UBERON:0002405,7.32e-23,93;UBERON:0001474,2.70e-21,82;UBERON:0004765,7.74e-20,90;UBERON:0001434,8.34e-16,100;UBERON:0000178,1.22e-11,15;UBERON:0000179,1.22e-11,15;UBERON:0000463,1.22e-11,15;UBERON:0003081,9.58e-09,203;UBERON:0007023,1.66e-07,114 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,2.09340350391728,0,0.263766978228454,1.23766352960047,0.994192127183747,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0,0.152826811495903,0.164201178899891,0,1.18009283054671,1.15148819429164,2.32224184974114,0.919421224478927,0,1.10926203050036,0,0,3.81680571135301,1.66198622559563,2.00544447470142,4.55722828503289,2.46307021663917,2.59114932815184,2.31818010870768,5.37973483484389,10.9584023669755,4.36651310138069,9.29716147622739,13.1573724166984,12.078548464909,13.8092348314632,9.22178543504762,9.69577142543199,14.479318590938,11.6187243045089,12.1883837934908,7.71793592124679,7.36846605156184,3.59557575112135,7.03992952453076,10.269728866435,5.11469700639233,6.26717470354761,7.38015533200038,7.2458207590558,5.22376629531451,4.53908179752912,8.09668923694247,18.592401228999,9.90817544998383,13.2485195270121,6.65939452896706,7.73383035573886,6.64571013625857,1.90129757680748,1.91343869968539,2.09658645508376,4.6054738770063,4.35512989240368,3.2145117339416,1.99508920618874,0.79566670879636,0.91332076882317,3.51992488922645,2.18455444504853,2.66852776159066,2.13365111283254,3.2031678962881,0.574752439954483,2.64417949113945,2.86216126360609,2.27685187643779,1.76171156811282,0.382273228125229,1.32171328579026,2.24203425192614,1.58030450865046,9.44206896546399,7.8602152549833,11.1024809459735,4.17966238476695,13.6887351986108,11.3627473376336,3.89653456815823,6.01616467179937,14.1410835587922,15.0643048316862,11.9153700056607,9.22257502024861,8.58391693895196,1.47994114143309,0.829050053357545,2.31842468588042,22.5395576006332,15.5173680292034,19.8617495229456,3.17266159553185,15.7120402376788,11.6833331464094,12.6509846009751,11.7869203299916,5.85975108470777,1.90090408889675,9.78738274005523,8.31912972503719,4.99722906209383,8.99753557767264,9.85353596305256,1.41124720257313,0,2.02754165435919,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0,0,2.16115474571226,1.09288586487763,2.59549109949101,0.97364218096405,0.696518949197069,0.664789802594326,4.5313218618015,5.14795419702115,2.97166001063652,0.198762407366705,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,3.9534125230819,0,0.872188104285069,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,1.51357427644931,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0,0.206651562351531,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0.504867548488229,0.368199594569197,0.323292113637624,0.355009592516614,0.10075209822764,0,0.773043412653187,0.272746120590835,0.573609190778008,0.365921118388786,0.662648841607426,0.348581828608555,0.518305275076852,0.252320850875628,0,0,0,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0.241011029883482,0.661763836394364,0.217879444092406,0.237270619111097,0.539325232640658,0,0.38474715694639,0,0,0,0,46.8993628840774,13.7595810334868,36.6289742142471,0,2.45976877086227,0,0.439001141634502,1.1240175325762,0.301586917234893,5.74048359982883,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0.891786973732369,0,0,0.708875486211932,0.358234090811393,0.871901815541886,0.766765358330422,0,0.44024217006613,6.42717158176393,1.8735593944205,6.312121671319,0.126995788584338,0.763976851116555,0,3.4214489204541,0.822619941626588,0.600686115687835,0.857479297891735,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,4.21667878966063,0.239624855491583,1.14861935834114,0,0.434343920002738,0.205476322550383,0,0,1.97030760201927,1.94064817373566,3.33691894327346,0,0,0,0,0,5.99205619157746,2.99161459204025,11.603634376209,1.10422342547226,2.50085260529839,0.813795071099207,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.434418072340414,1.76221041716467,0,4.9624326269493,4.09856981555372,5.87001567918944,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,2.29632954224082,0.200506470303285,2.67034867914099,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,1.08378575017541,0.501689773854853,1.27438136522519,0.831076008928724,0,0,0.522870902049801,0,0.328014645699706,0,21.8446944693171,0.0915694648183434,0.247528499761764,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0.991709492165869,1.15314040419064,0.382838137483752,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0.349934720244983,0.288666338176536,0,0,19.6760543623468,0,0,0.443430153536676,0.229723400206959,8.11916174771471,3.82318603571188,9.1143549947866,8.5763439164804,6.58179636937911,7.13320642311989,5.94034580961926,8.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| ||
|short_description=p4@IL6R | |||
}} | }} |
Latest revision as of 09:09, 17 September 2015
Short description: | p4@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL6R_5end |
Coexpression cluster: | NA |
Association with transcript: | 103bp_to_ENST00000344086_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.69e-36 | 98 |
blood island | 5.69e-36 | 98 |
hemolymphoid system | 2.33e-32 | 108 |
bone marrow | 1.22e-24 | 76 |
immune system | 7.32e-23 | 93 |
bone element | 2.70e-21 | 82 |
skeletal element | 7.74e-20 | 90 |
skeletal system | 8.34e-16 | 100 |
blood | 1.22e-11 | 15 |
haemolymphatic fluid | 1.22e-11 | 15 |
organism substance | 1.22e-11 | 15 |
lateral plate mesoderm | 9.58e-09 | 203 |
adult organism | 1.66e-07 | 114 |