FFCP PHASE1:Hg19::chr1:154377788..154377799,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENST00000344086_5end | |association_with_transcript=89bp_to_ENST00000344086_5end | ||
|cluster_id=chr1:154377788..154377799,+ | |||
|description=CAGE_peak_6_at_IL6R_5end | |description=CAGE_peak_6_at_IL6R_5end | ||
|id=chr1:154377788..154377799,+ | |id=chr1:154377788..154377799,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.66e-18!140;CL:0000988!5.33e-16!182;CL:0000037!8.19e-16!172;CL:0000566!8.19e-16!172;CL:0002087!4.12e-15!119;CL:0002032!9.86e-15!165;CL:0000837!9.86e-15!165;CL:0002031!7.22e-14!124;CL:0000791!1.44e-10!18;CL:0000789!1.44e-10!18;CL:0002420!1.44e-10!18;CL:0002419!1.44e-10!18;CL:0000790!1.44e-10!18;CL:0000766!3.35e-10!76;CL:0000763!8.21e-09!112;CL:0000049!8.21e-09!112;CL:0000557!9.63e-09!71;CL:0000084!2.86e-08!25;CL:0000827!2.86e-08!25;CL:0000839!2.95e-08!70;CL:0000860!3.03e-08!45;CL:0002009!3.48e-08!65;CL:0002057!4.24e-08!42;CL:0002194!5.68e-08!63;CL:0000576!5.68e-08!63;CL:0000040!5.68e-08!63;CL:0000559!5.68e-08!63;CL:0000624!1.39e-07!6 | |ontology_enrichment_celltype=CL:0000738!1.66e-18!140;CL:0000988!5.33e-16!182;CL:0000037!8.19e-16!172;CL:0000566!8.19e-16!172;CL:0002087!4.12e-15!119;CL:0002032!9.86e-15!165;CL:0000837!9.86e-15!165;CL:0002031!7.22e-14!124;CL:0000791!1.44e-10!18;CL:0000789!1.44e-10!18;CL:0002420!1.44e-10!18;CL:0002419!1.44e-10!18;CL:0000790!1.44e-10!18;CL:0000766!3.35e-10!76;CL:0000763!8.21e-09!112;CL:0000049!8.21e-09!112;CL:0000557!9.63e-09!71;CL:0000084!2.86e-08!25;CL:0000827!2.86e-08!25;CL:0000839!2.95e-08!70;CL:0000860!3.03e-08!45;CL:0002009!3.48e-08!65;CL:0002057!4.24e-08!42;CL:0002194!5.68e-08!63;CL:0000576!5.68e-08!63;CL:0000040!5.68e-08!63;CL:0000559!5.68e-08!63;CL:0000624!1.39e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.05e-37;18!CL:0000789;4.05e-37;18!CL:0002419;4.05e-37;18!CL:0000084;6.34e-26;25!CL:0000624;2.38e-25;6!CL:0000625;5.49e-18;11!CL:0000898;1.48e-13;3!CL:0000815;9.79e-10;2!CL:0000792;9.79e-10;2!CL:0002677;9.79e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.14e-37,18;CL:0000789,2.14e-37,18;CL:0002420,2.14e-37,18;CL:0002419,2.14e-37,18;CL:0000790,2.14e-37,18;CL:0000084,4.04e-26,25;CL:0000827,4.04e-26,25;CL:0000624,1.21e-25,6;CL:0000625,4.79e-18,11;CL:0000898,1.74e-13,3;CL:0000838,4.28e-11,52;CL:0000542,7.80e-11,53;CL:0000051,7.80e-11,53;CL:0000815,7.73e-10,2;CL:0000792,7.73e-10,2;CL:0002677,7.73e-10,2;CL:0002087,9.83e-08,115;CL:0000738,7.05e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;4.05e-37;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.37e-15!102;UBERON:0003061!5.37e-15!102;UBERON:0002193!2.05e-14!112;UBERON:0007023!1.29e-12!115;UBERON:0002405!1.04e-09!115;UBERON:0000178!1.24e-09!15;UBERON:0000179!1.24e-09!15;UBERON:0000463!1.24e-09!15;UBERON:0002371!8.02e-08!80;UBERON:0001474!2.24e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!5.37e-15!102;UBERON:0003061!5.37e-15!102;UBERON:0002193!2.05e-14!112;UBERON:0007023!1.29e-12!115;UBERON:0002405!1.04e-09!115;UBERON:0000178!1.24e-09!15;UBERON:0000179!1.24e-09!15;UBERON:0000463!1.24e-09!15;UBERON:0002371!8.02e-08!80;UBERON:0001474!2.24e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.32e-07;15!UBERON:0000179;5.32e-07;15!UBERON:0000463;5.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.04e-07,15;UBERON:0000179,7.04e-07,15;UBERON:0000463,7.04e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0.447830948479849,0.647787332037959,0,0,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0.188242339542605,0,0,0.612167784741805,0.962787081228281,0.639337125799041,0,0.398927315243264,0,0,0.56738522469114,0.622822248995575,0.502497330513487,1.5644487552606,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,1.96709770113833,1.57204305099666,2.2616164889946,1.33749196312542,2.93330039970231,3.31413464014313,3.89653456815823,1.55974639639243,1.47302953737419,2.43687284041983,2.43723477388514,1.79327847615945,2.47112760363769,0.164437904603676,0,0,2.37258501059297,3.21048993707656,3.1360657141493,0.566546713487831,1.14966148080576,1.37450978193052,2.02415753615602,1.59282707162048,2.60433381542567,1.90090408889675,1.50575119077773,1.4078527226986,0,1.18388626022008,0.821127996921047,0,0,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.09288586487763,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,10.1404027857465,1.96565443335525,0,0,0.491953754172454,0,0.109750285408626,0,0,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.75745460055828,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.206768026122887,1.50999940573032,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.13345112812495,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,1.50630081242847,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,2.1440859791201,2.05681136543097,1.29694662238543,0,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0.1605880751037,0,0.425846237690326,0,1.53620382154229,0.894704431569664,0.667396566847634,0.781552381608161,0,0,0,0,0,0.18714054040822,0,0.36408156524854,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0.824019371133798,0,0,0,0,0,0.369254416383208,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0.23056390438806,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.707660516026713,0,0.296521128680622,0.617819694732514,0.313265848516366,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0.387956065953678,0.0882561266915003,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.858452096273142,0,0,0,0,0,0.164831716762333,0.26961417541674,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0.182248669974074,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,3.97520666736664,0,0.13223260174269,0,0,0.533937062838473,0,2.48543433208317,0.992332043623902,1.18566979138767,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0.779441235357554,0.265729680626726,0.817826971279221,0,0,0.422624246717254,0.19998739585493,0.320075189082423,0.861074898304078,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.785181748008205,0.235939446695481,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.126831620387814,0,0.548257766857182,0.496211178389294,0,0,0,0,0,1.36597314810779,0,0.115233987555779,0.171488009437418,0.0679697329768317,0.0657727735628491,0.236387681767936,0.222462803784138,0.156986185701028,0,0,0,0,0.47775168788705,0.071476544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| ||
|short_description=p6@IL6R | |short_description=p6@IL6R | ||
}} | }} |
Latest revision as of 09:09, 17 September 2015
Short description: | p6@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IL6R_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000344086_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.14e-37 | 18 |
alpha-beta T cell | 2.14e-37 | 18 |
immature T cell | 2.14e-37 | 18 |
mature T cell | 2.14e-37 | 18 |
immature alpha-beta T cell | 2.14e-37 | 18 |
T cell | 4.04e-26 | 25 |
pro-T cell | 4.04e-26 | 25 |
CD4-positive, alpha-beta T cell | 1.21e-25 | 6 |
CD8-positive, alpha-beta T cell | 4.79e-18 | 11 |
naive T cell | 1.74e-13 | 3 |
lymphoid lineage restricted progenitor cell | 4.28e-11 | 52 |
lymphocyte | 7.80e-11 | 53 |
common lymphoid progenitor | 7.80e-11 | 53 |
regulatory T cell | 7.73e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.73e-10 | 2 |
naive regulatory T cell | 7.73e-10 | 2 |
nongranular leukocyte | 9.83e-08 | 115 |
leukocyte | 7.05e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 7.04e-07 | 15 |
haemolymphatic fluid | 7.04e-07 | 15 |
organism substance | 7.04e-07 | 15 |