FFCP PHASE1:Hg19::chr12:131323719..131323746,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2054 | |EntrezGene=2054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3403 | |HGNC=3403 | ||
|TSSclassifier=strong | |||
|UniProt=P32856 | |UniProt=P32856 | ||
|association_with_transcript=0bp_to_ENST00000392373_5end | |association_with_transcript=0bp_to_ENST00000392373_5end | ||
|cluster_id=chr12:131323719..131323746,- | |||
|description=CAGE_peak_2_at_STX2_5end | |description=CAGE_peak_2_at_STX2_5end | ||
|id=chr12:131323719..131323746,- | |id=chr12:131323719..131323746,- | ||
|ontology_enrichment_celltype=CL:0000055!1.31e-26!180;CL:0000057!7.21e-20!75;CL:0002620!1.96e-09!23;CL:0000680!9.69e-08!57;CL:0000056!9.69e-08!57;CL:0000355!9.69e-08!57;CL:0000222!2.55e-07!119;CL:0000187!4.47e-07!54;CL:0000393!5.27e-07!60;CL:0000211!5.27e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.31e-26!180;CL:0000057!7.21e-20!75;CL:0002620!1.96e-09!23;CL:0000680!9.69e-08!57;CL:0000056!9.69e-08!57;CL:0000355!9.69e-08!57;CL:0000222!2.55e-07!119;CL:0000187!4.47e-07!54;CL:0000393!5.27e-07!60;CL:0000211!5.27e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.32e-10;23!CL:0000057;1.94e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.83e-21,76;CL:0002620,1.05e-10,23;CL:0000680,9.49e-08,58;CL:0000056,9.49e-08,58;CL:0000355,9.49e-08,58;CL:0000187,5.40e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.23e-17!365;UBERON:0000119!2.36e-11!312;UBERON:0000483!3.54e-11!309;UBERON:0000481!4.45e-11!347;UBERON:0000477!1.71e-10!286;UBERON:0004111!1.91e-10!241;UBERON:0000914!2.10e-10!83;UBERON:0002329!2.10e-10!83;UBERON:0003077!2.10e-10!83;UBERON:0003059!2.10e-10!83;UBERON:0007282!2.10e-10!83;UBERON:0009618!2.10e-10!83;UBERON:0007285!2.10e-10!83;UBERON:0000025!9.29e-10!194;UBERON:0005743!7.01e-09!86;UBERON:0001017!8.09e-09!82;UBERON:0000468!8.37e-09!659;UBERON:0000073!1.47e-08!94;UBERON:0001016!1.47e-08!94;UBERON:0004290!1.76e-08!70;UBERON:0005256!2.26e-08!143;UBERON:0002346!2.76e-08!90;UBERON:0003075!4.26e-08!86;UBERON:0007284!4.26e-08!86;UBERON:0001049!5.40e-08!57;UBERON:0005068!5.40e-08!57;UBERON:0006241!5.40e-08!57;UBERON:0007135!5.40e-08!57;UBERON:0002100!8.08e-08!216;UBERON:0002385!1.26e-07!63;UBERON:0001015!1.26e-07!63;UBERON:0000383!1.26e-07!63;UBERON:0002616!1.49e-07!59;UBERON:0001134!1.80e-07!61;UBERON:0002036!1.80e-07!61;UBERON:0003082!1.80e-07!61;UBERON:0000955!2.68e-07!69;UBERON:0006238!2.68e-07!69;UBERON:0007023!7.05e-07!115;UBERON:0000924!7.14e-07!173;UBERON:0006601!7.14e-07!173;UBERON:0000033!7.70e-07!123 | |ontology_enrichment_uberon=UBERON:0000475!2.23e-17!365;UBERON:0000119!2.36e-11!312;UBERON:0000483!3.54e-11!309;UBERON:0000481!4.45e-11!347;UBERON:0000477!1.71e-10!286;UBERON:0004111!1.91e-10!241;UBERON:0000914!2.10e-10!83;UBERON:0002329!2.10e-10!83;UBERON:0003077!2.10e-10!83;UBERON:0003059!2.10e-10!83;UBERON:0007282!2.10e-10!83;UBERON:0009618!2.10e-10!83;UBERON:0007285!2.10e-10!83;UBERON:0000025!9.29e-10!194;UBERON:0005743!7.01e-09!86;UBERON:0001017!8.09e-09!82;UBERON:0000468!8.37e-09!659;UBERON:0000073!1.47e-08!94;UBERON:0001016!1.47e-08!94;UBERON:0004290!1.76e-08!70;UBERON:0005256!2.26e-08!143;UBERON:0002346!2.76e-08!90;UBERON:0003075!4.26e-08!86;UBERON:0007284!4.26e-08!86;UBERON:0001049!5.40e-08!57;UBERON:0005068!5.40e-08!57;UBERON:0006241!5.40e-08!57;UBERON:0007135!5.40e-08!57;UBERON:0002100!8.08e-08!216;UBERON:0002385!1.26e-07!63;UBERON:0001015!1.26e-07!63;UBERON:0000383!1.26e-07!63;UBERON:0002616!1.49e-07!59;UBERON:0001134!1.80e-07!61;UBERON:0002036!1.80e-07!61;UBERON:0003082!1.80e-07!61;UBERON:0000955!2.68e-07!69;UBERON:0006238!2.68e-07!69;UBERON:0007023!7.05e-07!115;UBERON:0000924!7.14e-07!173;UBERON:0006601!7.14e-07!173;UBERON:0000033!7.70e-07!123 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.41e-10,132;UBERON:0002329,9.15e-09,71;UBERON:0003059,9.15e-09,71;UBERON:0007282,9.15e-09,71;UBERON:0004290,9.15e-09,71;UBERON:0009618,9.15e-09,71;UBERON:0007524,1.06e-08,73;UBERON:0003077,2.01e-08,72;UBERON:0007285,2.01e-08,72;UBERON:0002385,1.40e-07,64;UBERON:0001015,1.40e-07,64;UBERON:0000383,1.40e-07,64;UBERON:0001134,1.51e-07,62;UBERON:0002036,1.51e-07,62;UBERON:0003082,1.51e-07,62;UBERON:0001017,2.81e-07,81;UBERON:0000483,3.04e-07,306;UBERON:0000119,4.12e-07,309;UBERON:0003102,4.40e-07,99;UBERON:0007503,6.16e-07,78;UBERON:0003104,6.21e-07,160;UBERON:0009142,6.21e-07,160;UBERON:0001016,6.63e-07,89;UBERON:0000486,6.73e-07,83;UBERON:0005256,9.30e-07,122 | |||
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| ||
|short_description=p2@STX2 | |short_description=p2@STX2 | ||
}} | }} |
Latest revision as of 09:08, 17 September 2015
Short description: | p2@STX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392373_5end |
EntrezGene: | STX2 |
HGNC: | 3403 |
UniProt: | P32856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.83e-21 | 76 |
skin fibroblast | 1.05e-10 | 23 |
muscle precursor cell | 9.49e-08 | 58 |
myoblast | 9.49e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.49e-08 | 58 |
muscle cell | 5.40e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.41e-10 | 132 |
somite | 9.15e-09 | 71 |
presomitic mesoderm | 9.15e-09 | 71 |
presumptive segmental plate | 9.15e-09 | 71 |
dermomyotome | 9.15e-09 | 71 |
trunk paraxial mesoderm | 9.15e-09 | 71 |
dense mesenchyme tissue | 1.06e-08 | 73 |
paraxial mesoderm | 2.01e-08 | 72 |
presumptive paraxial mesoderm | 2.01e-08 | 72 |
muscle tissue | 1.40e-07 | 64 |
musculature | 1.40e-07 | 64 |
musculature of body | 1.40e-07 | 64 |
skeletal muscle tissue | 1.51e-07 | 62 |
striated muscle tissue | 1.51e-07 | 62 |
myotome | 1.51e-07 | 62 |
central nervous system | 2.81e-07 | 81 |
epithelium | 3.04e-07 | 306 |
cell layer | 4.12e-07 | 309 |
surface structure | 4.40e-07 | 99 |
epithelial vesicle | 6.16e-07 | 78 |
mesenchyme | 6.21e-07 | 160 |
entire embryonic mesenchyme | 6.21e-07 | 160 |
nervous system | 6.63e-07 | 89 |
multilaminar epithelium | 6.73e-07 | 83 |
trunk mesenchyme | 9.30e-07 | 122 |