FFCP PHASE1:Hg19::chr1:154377675..154377692,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:154377675..154377692,+
|short_description=p7@IL6R
|description=CAGE_peak_7_at_IL6R_5end
|association_with_transcript=-6bp_to_,6bp_to_ENST00000344086,ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3570 | |EntrezGene=3570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6019 | |HGNC=6019 | ||
|TSSclassifier=strong | |||
|UniProt=P08887,A0N0L5 | |UniProt=P08887,A0N0L5 | ||
|association_with_transcript=-6bp_to_,6bp_to_ENST00000344086,ENST00000368485,NM_000565,NM_001206866,NM_181359,uc001fez.1,uc001ffa.1_5end | |||
|cluster_id=chr1:154377675..154377692,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_7_at_IL6R_5end | |||
|id=chr1:154377675..154377692,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.03e-23!18;CL:0000789!1.03e-23!18;CL:0002420!1.03e-23!18;CL:0002419!1.03e-23!18;CL:0000790!1.03e-23!18;CL:0000838!6.22e-19!52;CL:0000542!2.08e-18!53;CL:0000051!2.08e-18!53;CL:0000084!1.15e-17!25;CL:0000827!1.15e-17!25;CL:0000625!2.37e-15!11;CL:0000624!7.84e-12!6;CL:0000738!1.47e-09!140;CL:0002087!1.10e-08!119;CL:0002031!9.71e-08!124;CL:0000898!7.64e-07!3;CL:0000080!8.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.62e-53;18!CL:0000789;7.62e-53;18!CL:0002419;7.62e-53;18!CL:0000084;2.48e-37;25!CL:0000624;1.62e-35;6!CL:0000625;2.76e-25;11!CL:0000898;6.71e-19;3!CL:0000815;3.77e-13;2!CL:0000792;3.77e-13;2!CL:0002677;3.77e-13;2!CL:0000226;1.19e-08;3!CL:0000842;1.19e-08;3!CL:0000542;1.39e-08;53!CL:0000895;1.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.72e-53,18;CL:0000789,7.72e-53,18;CL:0002420,7.72e-53,18;CL:0002419,7.72e-53,18;CL:0000790,7.72e-53,18;CL:0000084,2.51e-37,25;CL:0000827,2.51e-37,25;CL:0000624,9.23e-36,6;CL:0000625,3.94e-25,11;CL:0000838,1.93e-19,52;CL:0000898,3.90e-19,3;CL:0000542,5.09e-19,53;CL:0000051,5.09e-19,53;CL:0000815,2.12e-13,2;CL:0000792,2.12e-13,2;CL:0002677,2.12e-13,2;CL:0002087,1.13e-09,115;CL:0000226,1.29e-08,3;CL:0000842,1.29e-08,3;CL:0000738,1.06e-07,136;CL:0000810,1.85e-07,1;CL:0000895,1.85e-07,1;CL:0002436,1.85e-07,1;CL:0002427,1.85e-07,1;CL:0002428,1.85e-07,1;CL:0002429,1.85e-07,1;CL:0002433,1.85e-07,1;CL:0002431,1.85e-07,1;CL:0002432,1.85e-07,1;CL:0002031,9.02e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;7.62e-53;18!CL:0000051;1.39e-08;53!CL:0002427;1.79e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.79e-07;1!DOID:0070004;1.79e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.97e-07,1;DOID:0070004,1.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-11!115;UBERON:0000178!1.26e-09!15;UBERON:0000179!1.26e-09!15;UBERON:0000463!1.26e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.34e-07,1 | |||
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| ||
|short_description=p7@IL6R | |||
}} | }} |
Latest revision as of 09:07, 17 September 2015
Short description: | p7@IL6R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_IL6R_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | -6bp_to_, 6bp_to_ENST00000344086, ENST00000368485, NM_000565, NM_001206866, NM_181359, uc001fez.1, uc001ffa.1_5end |
EntrezGene: | IL6R |
HGNC: | 6019 |
UniProt: | P08887A0N0L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.97e-07 | 1 |
myeloma | 1.97e-07 | 1 |