FFCP PHASE1:Hg19::chr13:41635617..41635721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11193 | |EntrezGene=11193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12739 | |HGNC=12739 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4M2,O75554 | |UniProt=B7Z4M2,O75554 | ||
|association_with_transcript=0bp_to_ENST00000542082,NM_007187,uc001uxt.2,uc010tfd.1_5end | |association_with_transcript=0bp_to_ENST00000542082,NM_007187,uc001uxt.2,uc010tfd.1_5end | ||
|cluster_id=chr13:41635617..41635721,+ | |||
|description=CAGE_peak_1_at_WBP4_5end | |description=CAGE_peak_1_at_WBP4_5end | ||
|id=chr13:41635617..41635721,+ | |id=chr13:41635617..41635721,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.16e-17!115;UBERON:0001049!2.90e-14!57;UBERON:0005068!2.90e-14!57;UBERON:0006241!2.90e-14!57;UBERON:0007135!2.90e-14!57;UBERON:0000073!1.23e-13!94;UBERON:0001016!1.23e-13!94;UBERON:0002780!4.63e-13!41;UBERON:0001890!4.63e-13!41;UBERON:0006240!4.63e-13!41;UBERON:0003080!8.59e-13!42;UBERON:0001017!1.15e-12!82;UBERON:0002616!2.17e-12!59;UBERON:0000955!3.18e-12!69;UBERON:0006238!3.18e-12!69;UBERON:0005743!1.05e-11!86;UBERON:0002020!1.46e-10!34;UBERON:0003528!1.46e-10!34;UBERON:0001893!6.19e-10!34;UBERON:0003075!1.01e-09!86;UBERON:0007284!1.01e-09!86;UBERON:0001869!1.05e-09!32;UBERON:0002791!1.13e-09!33;UBERON:0000033!2.49e-09!123;UBERON:0000153!2.70e-09!129;UBERON:0007811!2.70e-09!129;UBERON:0004121!3.67e-09!169;UBERON:0002346!4.39e-09!90;UBERON:0000924!8.63e-09!173;UBERON:0006601!8.63e-09!173;UBERON:0003056!1.63e-07!61;UBERON:0000062!2.81e-07!511;UBERON:0000956!6.68e-07!25;UBERON:0000203!6.68e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.62e-09;41!UBERON:0001890;1.62e-09;41!UBERON:0003528;2.83e-09;34!UBERON:0002020;2.83e-09;34!UBERON:0002791;5.47e-09;32!UBERON:0001869;5.92e-09;32!UBERON:0001893;7.86e-09;34!UBERON:0000073;1.40e-08;53!UBERON:0002616;1.40e-08;53!UBERON:0000956;6.20e-07;25!UBERON:0000203;6.20e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.02e-17,114;UBERON:0001016,8.86e-15,89;UBERON:0001049,1.74e-14,56;UBERON:0005068,1.74e-14,56;UBERON:0006241,1.74e-14,56;UBERON:0007135,1.74e-14,56;UBERON:0000073,1.16e-13,53;UBERON:0002616,1.16e-13,53;UBERON:0002780,4.63e-13,41;UBERON:0001890,4.63e-13,41;UBERON:0003080,4.63e-13,41;UBERON:0006240,4.63e-13,41;UBERON:0001017,8.53e-13,81;UBERON:0000955,2.24e-12,68;UBERON:0006238,2.24e-12,68;UBERON:0003528,1.46e-10,34;UBERON:0002020,1.46e-10,34;UBERON:0001893,6.19e-10,34;UBERON:0003075,9.58e-10,82;UBERON:0007284,9.58e-10,82;UBERON:0001869,1.05e-09,32;UBERON:0002791,1.22e-09,32;UBERON:0002346,4.41e-09,86;UBERON:0004121,1.34e-08,171;UBERON:0000924,1.34e-08,171;UBERON:0006601,1.34e-08,171;UBERON:0010314,2.83e-08,132;UBERON:0003056,4.83e-08,61;UBERON:0011216,1.04e-07,223;UBERON:0010371,3.01e-07,104;UBERON:0000956,6.68e-07,25;UBERON:0000203,6.68e-07,25 | |||
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| ||
|short_description=p1@WBP4 | |short_description=p1@WBP4 | ||
}} | }} |
Latest revision as of 08:52, 17 September 2015
Short description: | p1@WBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WBP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542082, NM_007187, uc001uxt.2, uc010tfd.1_5end |
EntrezGene: | WBP4 |
HGNC: | 12739 |
UniProt: | B7Z4M2O75554 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.02e-17 | 114 |
nervous system | 8.86e-15 | 89 |
neural tube | 1.74e-14 | 56 |
neural rod | 1.74e-14 | 56 |
future spinal cord | 1.74e-14 | 56 |
neural keel | 1.74e-14 | 56 |
regional part of nervous system | 1.16e-13 | 53 |
regional part of brain | 1.16e-13 | 53 |
regional part of forebrain | 4.63e-13 | 41 |
forebrain | 4.63e-13 | 41 |
anterior neural tube | 4.63e-13 | 41 |
future forebrain | 4.63e-13 | 41 |
central nervous system | 8.53e-13 | 81 |
brain | 2.24e-12 | 68 |
future brain | 2.24e-12 | 68 |
brain grey matter | 1.46e-10 | 34 |
gray matter | 1.46e-10 | 34 |
telencephalon | 6.19e-10 | 34 |
neural plate | 9.58e-10 | 82 |
presumptive neural plate | 9.58e-10 | 82 |
cerebral hemisphere | 1.05e-09 | 32 |
regional part of telencephalon | 1.22e-09 | 32 |
neurectoderm | 4.41e-09 | 86 |
ectoderm-derived structure | 1.34e-08 | 171 |
ectoderm | 1.34e-08 | 171 |
presumptive ectoderm | 1.34e-08 | 171 |
structure with developmental contribution from neural crest | 2.83e-08 | 132 |
pre-chordal neural plate | 4.83e-08 | 61 |
organ system subdivision | 1.04e-07 | 223 |
ecto-epithelium | 3.01e-07 | 104 |
cerebral cortex | 6.68e-07 | 25 |
pallium | 6.68e-07 | 25 |