FFCP PHASE1:Hg19::chr12:13105142..13105150,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55507 | |EntrezGene=55507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13310 | |HGNC=13310 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWX9 | |UniProt=F5GWX9 | ||
|association_with_transcript=-61bp_to_ENST00000541128_5end | |association_with_transcript=-61bp_to_ENST00000541128_5end | ||
|cluster_id=chr12:13105142..13105150,- | |||
|coexpression_cluster_id=C146 | |coexpression_cluster_id=C146 | ||
|description=CAGE_peak_2_at_GPRC5D_5end | |description=CAGE_peak_2_at_GPRC5D_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!1.24e-39!14;CL:0000945!1.12e-28!24;CL:0000826!1.12e-28!24;CL:0000838!1.66e-15!52;CL:0000542!3.48e-15!53;CL:0000051!3.48e-15!53 | |ontology_enrichment_celltype=CL:0000236!1.24e-39!14;CL:0000945!1.12e-28!24;CL:0000826!1.12e-28!24;CL:0000838!1.66e-15!52;CL:0000542!3.48e-15!53;CL:0000051!3.48e-15!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.07e-16;13!CL:0002537;3.26e-11;5!CL:0000945;2.67e-09;24 | |ontology_enrichment_celltype_v019=CL:0000236;3.07e-16;13!CL:0002537;3.26e-11;5!CL:0000945;2.67e-09;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.66e-15,14;CL:0002537,3.26e-11,5;CL:0000945,2.67e-09,24;CL:0000826,2.67e-09,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4960!4.06e-10!1;DOID:0070004!4.06e-10!1 | |ontology_enrichment_disease=DOID:4960!4.06e-10!1;DOID:0070004!4.06e-10!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.37e-12!3;UBERON:0004854!3.37e-12!3;UBERON:0009034!3.37e-12!3;UBERON:0002095!3.37e-12!3;UBERON:0004782!3.37e-12!3;UBERON:0003281!3.37e-12!3;UBERON:0009664!3.37e-12!3;UBERON:0002296!3.37e-12!3;UBERON:0005602!3.37e-12!3;UBERON:0001179!3.37e-12!3;UBERON:0006293!3.37e-12!3;UBERON:0001154!4.85e-10!1;UBERON:0001153!4.85e-10!1;UBERON:0002372!5.30e-10!1;UBERON:0001961!5.30e-10!1;UBERON:0001744!5.30e-10!1;UBERON:0001735!5.30e-10!1 | |ontology_enrichment_uberon=UBERON:0002106!3.37e-12!3;UBERON:0004854!3.37e-12!3;UBERON:0009034!3.37e-12!3;UBERON:0002095!3.37e-12!3;UBERON:0004782!3.37e-12!3;UBERON:0003281!3.37e-12!3;UBERON:0009664!3.37e-12!3;UBERON:0002296!3.37e-12!3;UBERON:0005602!3.37e-12!3;UBERON:0001179!3.37e-12!3;UBERON:0006293!3.37e-12!3;UBERON:0001154!4.85e-10!1;UBERON:0001153!4.85e-10!1;UBERON:0002372!5.30e-10!1;UBERON:0001961!5.30e-10!1;UBERON:0001744!5.30e-10!1;UBERON:0001735!5.30e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.18e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0000305;2.18e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.18e-08,7;UBERON:0004871,1.69e-07,8 | |||
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|short_description=p2@GPRC5D | |short_description=p2@GPRC5D | ||
}} | }} |
Latest revision as of 08:50, 17 September 2015
Short description: | p2@GPRC5D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPRC5D_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | -61bp_to_ENST00000541128_5end |
EntrezGene: | GPRC5D |
HGNC: | 13310 |
UniProt: | F5GWX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.66e-15 | 14 |
amnion mesenchymal stem cell | 3.26e-11 | 5 |
lymphocyte of B lineage | 2.67e-09 | 24 |
pro-B cell | 2.67e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.18e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.69e-07 | 8 |