FFCP PHASE1:Hg19::chr9:35748867..35748868,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57704 | |EntrezGene=57704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18986 | |HGNC=18986 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_uc011lpb.1_5end | |association_with_transcript=55bp_to_uc011lpb.1_5end | ||
|cluster_id=chr9:35748867..35748868,- | |||
|coexpression_cluster_id=C149 | |coexpression_cluster_id=C149 | ||
|description=CAGE_peak_13_at_GBA2_5end | |description=CAGE_peak_13_at_GBA2_5end | ||
|id=chr9:35748867..35748868,- | |id=chr9:35748867..35748868,- | ||
|ontology_enrichment_celltype=CL:0000167!3.05e-09!1;CL:0000164!3.05e-09!1;CL:0000502!3.05e-09!1;CL:0000172!3.05e-09!1;CL:0000173!3.05e-09!1;CL:0002351!3.05e-09!1 | |ontology_enrichment_celltype=CL:0000167!3.05e-09!1;CL:0000164!3.05e-09!1;CL:0000502!3.05e-09!1;CL:0000172!3.05e-09!1;CL:0000173!3.05e-09!1;CL:0002351!3.05e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000346;5.96e-34;3!CL:1000428;5.96e-34;3!CL:0002559;5.15e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.96e-34,3;CL:1000428,5.96e-34,3;CL:0002559,5.15e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!2.04e-09!1;DOID:3149!2.04e-09!1;DOID:4430!3.05e-09!1 | |ontology_enrichment_disease=DOID:3151!2.04e-09!1;DOID:3149!2.04e-09!1;DOID:4430!3.05e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.66e-11!3;UBERON:0001282!7.27e-09!1;UBERON:0009842!7.27e-09!1;UBERON:0003704!7.27e-09!1;UBERON:0001171!7.27e-09!1;UBERON:0001172!7.27e-09!1;UBERON:0002363!1.07e-08!1;UBERON:0007647!1.07e-08!1;UBERON:0010115!1.07e-08!1;UBERON:0005174!3.06e-07!5;UBERON:0001137!3.06e-07!5 | |ontology_enrichment_uberon=UBERON:0002240!1.66e-11!3;UBERON:0001282!7.27e-09!1;UBERON:0009842!7.27e-09!1;UBERON:0003704!7.27e-09!1;UBERON:0001171!7.27e-09!1;UBERON:0001172!7.27e-09!1;UBERON:0002363!1.07e-08!1;UBERON:0007647!1.07e-08!1;UBERON:0010115!1.07e-08!1;UBERON:0005174!3.06e-07!5;UBERON:0001137!3.06e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.96e-34;3!UBERON:0001992;5.96e-34;3!UBERON:0002021;4.21e-21;5!UBERON:0002073;5.15e-21;5!UBERON:0002067;2.45e-12;9!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.96e-34,3;UBERON:0001992,5.96e-34,3;UBERON:0002021,4.21e-21,5;UBERON:0002073,5.15e-21,5;UBERON:0005086,5.15e-21,5;UBERON:0002067,2.45e-12,9;UBERON:0004016,2.45e-12,9;UBERON:0010083,2.45e-12,9;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
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|short_description=p13@GBA2 | |short_description=p13@GBA2 | ||
}} | }} |
Latest revision as of 08:45, 17 September 2015
Short description: | p13@GBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GBA2_5end |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | 55bp_to_uc011lpb.1_5end |
EntrezGene: | GBA2 |
HGNC: | 18986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.96e-34 | 3 |
stem cell of epidermis | 5.96e-34 | 3 |
hair follicle cell | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.96e-34 | 3 |
papillary layer of dermis | 5.96e-34 | 3 |
occipital lobe | 4.21e-21 | 5 |
hair follicle | 5.15e-21 | 5 |
hair follicle placode | 5.15e-21 | 5 |
dermis | 2.45e-12 | 9 |
dermatome | 2.45e-12 | 9 |
future dermis | 2.45e-12 | 9 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |