FFCP PHASE1:Hg19::chr16:66637879..66637914,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:66637879..66637914,+
|short_description=p5@CMTM3
|description=CAGE_peak_5_at_CMTM3_5end
|association_with_transcript=-20bp_to_ENST00000424011,NR_037613_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123920 | |EntrezGene=123920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19174 | |HGNC=19174 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MX0 | |UniProt=Q96MX0 | ||
|association_with_transcript=-20bp_to_ENST00000424011,NR_037613_5end | |||
|cluster_id=chr16:66637879..66637914,+ | |||
|description=CAGE_peak_5_at_CMTM3_5end | |||
|id=chr16:66637879..66637914,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.55e-15!25;CL:0000827!2.55e-15!25;CL:0000791!7.75e-13!18;CL:0000789!7.75e-13!18;CL:0002420!7.75e-13!18;CL:0002419!7.75e-13!18;CL:0000790!7.75e-13!18;CL:0000625!9.02e-09!11;CL:0000838!1.93e-08!52;CL:0000542!2.09e-08!53;CL:0000051!2.09e-08!53;CL:0000988!9.72e-07!182;CL:0000037!9.76e-07!172;CL:0000566!9.76e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.74e-34;25!CL:0000791;2.40e-32;18!CL:0000789;2.40e-32;18!CL:0002419;2.40e-32;18!CL:0000625;3.95e-23;11!CL:1000507;1.97e-10;10!CL:1000494;1.97e-10;10!CL:0000624;4.77e-09;6!CL:0000542;1.36e-08;53!CL:0000784;3.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.36e-35,25;CL:0000827,8.36e-35,25;CL:0000791,9.14e-33,18;CL:0000789,9.14e-33,18;CL:0002420,9.14e-33,18;CL:0002419,9.14e-33,18;CL:0000790,9.14e-33,18;CL:0000625,1.48e-23,11;CL:0000838,1.60e-16,52;CL:0000542,4.34e-16,53;CL:0000051,4.34e-16,53;CL:0000037,1.09e-11,168;CL:0000988,2.95e-11,177;CL:1000507,1.30e-10,10;CL:1000494,1.30e-10,10;CL:0002032,1.72e-09,161;CL:0000837,1.72e-09,161;CL:0000738,3.00e-09,136;CL:0000624,4.45e-09,6;CL:0002031,1.78e-07,120;CL:0002087,2.48e-07,115;CL:0000784,5.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.40e-32;18!CL:0000051;1.36e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.14e-07!15;UBERON:0000179!1.14e-07!15;UBERON:0000463!1.14e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.97e-10;10!UBERON:0009773;1.97e-10;10!UBERON:0001231;1.97e-10;10!UBERON:0004810;1.97e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.30e-10,10 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0,1.74467704820074,2.53299878168311,0,0,0.491467873003018,0.697801167972428,0.873765488520689,0.791300934685361,0.123766352960047,0,0,0,0.730310090387373,0,0.369363174230364,0,0.626909442956176,0,0.136874425072884,0.251085279189606,1.06978768047132,0.985207073399349,0.708397031823113,0.786728553697808,2.30297638858328,0,0,0,0.369754010166788,0,0,0,0,0.802177789880567,1.30206522429511,0.223915474239924,2.26725566213286,0.257575567634187,0.581592955118259,0,0.970336244751265,0,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0.521482918420201,0.434377689410233,0,1.10483290796269,0,0.211255286311942,0.637812899895131,0.419317291016752,0.22465726229299,0.600707571366025,0.64290234678832,0.285012743741249,0,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,1.32171328579026,0,2.10707267820062,1.37696839079683,2.35806457649499,2.46721798799411,3.51091640320424,1.30368906653436,0.946895611469467,3.89653456815823,2.00538822393312,1.17842362989935,0.664601683750863,0.270803863765016,2.81800903396485,1.69077151827842,2.79544437826249,3.59255023121603,0.869409257205157,1.03800594213442,1.07016331235885,4.18142095219907,2.03956816855619,0.766440987203842,0.68725489096526,1.01207876807801,2.22995790026868,4.55758417699493,3.8018081777935,1.20460095262218,1.79181255616186,1.24930726552346,1.65744076430812,2.46338399076314,3.42731463482045,2.40696176205157,1.44824403882799,0,0.670700859703636,0.383587685530591,0.361439152384566,1.00267582127178,0.144846518960824,0,0.486634870302636,0.661743720148475,1.77383517970051,0.966182642624386,0.392937226493138,0.728590576585084,0,0.649094787309367,0.174129737299267,0.398873881556595,1.19245312152671,1.14398982156026,2.60020250930695,0.39752481473341,0.860234595106124,0,0,0,0,0,0.258416759169329,0.71153252537342,0,0,0,0,0.367663080345869,0.81014194788176,0.17859945656816,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.529636723252875,1.43418310374407,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0.538168907066586,0,0,0,0.206105058476878,0.515281080091258,0.18611685633159,0.675105328965065,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.10366105501537,0.756962552626885,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,2.20731549707325,0.122988438543114,1.02940686179115,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.34779121492523,0.352226082707465,0.721832238805369,0,0,0,0.858486162094873,0,0.468008530278475,0.148631162288728,0,0.839910640994298,1.27597587518148,0.0895585227028483,0,0,0.985326475791887,1.76096868026452,1.03664057770386,0.720599767084807,0.75745460055828,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0.904902010304444,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,2.35378802386407,0.788123040807709,0.862510299438069,1.28343036279748,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.260650843404249,0,0,1.03384013061444,0.647142602455851,0.640365346820666,0.303127571446259,0,0.604780586659361,0,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0,1.03850885836724,0.348631135379878,0,0.40101294060657,0.368323955743585,0.114814448164607,0.182091168006717,0.131124414959424,3.15839729035188,1.69433741629712,1.56869953835371,2.92278449306521,4.74982330017941,0,0,0.431831832204279,0,0.541892875087706,1.00337954770971,0.509752546090077,0,2.91037181138832,0,0,0,2.62411716559765,0.976135183992909,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.267096106940212,0.495854746082934,0.768760269460425,0.893288987462089,0.10115778085555,0,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,1.32687795048244,0,0.578775534266688,0,0.405820753925408,0,0,0.286822704408103,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0.229723400206959,0.507447609232169,2.29391162142713,1.13929437434833,0.714695326373367,0.82272454617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| ||
|short_description=p5@CMTM3 | |||
}} | }} |
Latest revision as of 08:45, 17 September 2015
Short description: | p5@CMTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CMTM3_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000424011, NR_037613_5end |
EntrezGene: | CMTM3 |
HGNC: | 19174 |
UniProt: | Q96MX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 8.36e-35 | 25 |
pro-T cell | 8.36e-35 | 25 |
mature alpha-beta T cell | 9.14e-33 | 18 |
alpha-beta T cell | 9.14e-33 | 18 |
immature T cell | 9.14e-33 | 18 |
mature T cell | 9.14e-33 | 18 |
immature alpha-beta T cell | 9.14e-33 | 18 |
CD8-positive, alpha-beta T cell | 1.48e-23 | 11 |
lymphoid lineage restricted progenitor cell | 1.60e-16 | 52 |
lymphocyte | 4.34e-16 | 53 |
common lymphoid progenitor | 4.34e-16 | 53 |
hematopoietic stem cell | 1.09e-11 | 168 |
hematopoietic cell | 2.95e-11 | 177 |
kidney tubule cell | 1.30e-10 | 10 |
nephron tubule epithelial cell | 1.30e-10 | 10 |
hematopoietic oligopotent progenitor cell | 1.72e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-09 | 161 |
leukocyte | 3.00e-09 | 136 |
CD4-positive, alpha-beta T cell | 4.45e-09 | 6 |
hematopoietic lineage restricted progenitor cell | 1.78e-07 | 120 |
nongranular leukocyte | 2.48e-07 | 115 |
plasmacytoid dendritic cell | 5.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.30e-10 | 10 |