FFCP PHASE1:Hg19::chr5:179051340..179051371,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:179051340..179051371,-
|short_description=p37@HNRNPH1
|description=CAGE_peak_37_at_HNRNPH1_5end
|association_with_transcript=40bp_to_ENST00000512273_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3187 | |EntrezGene=3187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5041 | |HGNC=5041 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9D3 | |UniProt=D6R9D3 | ||
|association_with_transcript=40bp_to_ENST00000512273_5end | |||
|cluster_id=chr5:179051340..179051371,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_37_at_HNRNPH1_5end | |||
|id=chr5:179051340..179051371,- | |||
|ontology_enrichment_celltype=CL:0002150!4.67e-07!3;CL:0000861!4.67e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.69e-13;9!CL:0002632;1.69e-13;9!CL:0000322;1.04e-10;3!CL:0000307;1.04e-10;3!CL:0002368;1.18e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.69e-13,9;CL:0002632,1.69e-13,9;CL:0000322,9.90e-11,3;CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3;CL:0002368,1.18e-09,13 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10!CL:0000377;1.04e-10;3 | |||
|ontology_enrichment_disease=DOID:162!1.51e-08!235;DOID:14566!4.26e-08!239;DOID:305!4.45e-08!106;DOID:0050615!5.74e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.21e-15;2!DOID:3908;6.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.05e-15,2;DOID:3908,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000072!1.75e-12!46;UBERON:0001737!3.30e-12!9;UBERON:0008947!1.17e-11!38;UBERON:0003258!1.17e-11!38;UBERON:0000065!4.14e-11!53;UBERON:0001557!4.14e-11!19;UBERON:0001004!5.77e-10!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.21e-15;2!UBERON:0002173;2.21e-15;2!UBERON:0002186;2.21e-15;2!UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11!UBERON:0004821;1.04e-10;3!UBERON:0007499;1.04e-10;3!UBERON:0003215;1.04e-10;3!UBERON:0010368;1.04e-10;3!UBERON:0009911;1.04e-10;3!UBERON:0002299;1.04e-10;3!UBERON:0006524;1.04e-10;3!UBERON:0008874;1.04e-10;3!UBERON:0002169;1.04e-10;3!UBERON:0004894;1.04e-10;3!UBERON:0007196;1.71e-08;15!UBERON:0001558;1.71e-08;15!UBERON:0009856;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.05e-15,2;UBERON:0002173,2.05e-15,2;UBERON:0002186,2.05e-15,2;UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11;UBERON:0004821,9.90e-11,3;UBERON:0003215,9.90e-11,3;UBERON:0010368,9.90e-11,3;UBERON:0009911,9.90e-11,3;UBERON:0002299,9.90e-11,3;UBERON:0006524,9.90e-11,3;UBERON:0008874,9.90e-11,3;UBERON:0002169,9.90e-11,3;UBERON:0004894,9.90e-11,3;UBERON:0007196,1.71e-08,15;UBERON:0001558,1.71e-08,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,5.6975897841505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.110293972732394,0.871517776369625,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0.626719583092093,0,0,0.321176150207399,0,0.425846237690326,0,0.307240764308458,0,0,1.56310476321632,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,1.13654458722565,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580537987734511,0.730893170861856,0.739039113478883,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0.11796972334774,0,0.231051332300676,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0.11294608203896,0.109940516745429,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,7.72942721826042,19.8293456315572,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | 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| ||
|short_description=p37@HNRNPH1 | |||
}} | }} |
Latest revision as of 08:41, 17 September 2015
Short description: | p37@HNRNPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_HNRNPH1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 40bp_to_ENST00000512273_5end |
EntrezGene: | HNRNPH1 |
HGNC: | 5041 |
UniProt: | D6R9D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.69e-13 | 9 |
epithelial cell of lower respiratory tract | 1.69e-13 | 9 |
pneumocyte | 9.90e-11 | 3 |
duct epithelial cell | 1.09e-10 | 3 |
branched duct epithelial cell | 1.09e-10 | 3 |
tracheal epithelial cell | 1.09e-10 | 3 |
tracheoblast | 1.09e-10 | 3 |
respiratory epithelial cell | 1.18e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.05e-15 | 2 |
alveolar duct | 2.05e-15 | 2 |
bronchiole | 2.05e-15 | 2 |
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |
pulmonary alveolus epithelium | 9.90e-11 | 3 |
alveolus | 9.90e-11 | 3 |
pulmonary lobule | 9.90e-11 | 3 |
lobule | 9.90e-11 | 3 |
alveolus of lung | 9.90e-11 | 3 |
alveolar system | 9.90e-11 | 3 |
pulmonary acinus | 9.90e-11 | 3 |
alveolar sac | 9.90e-11 | 3 |
alveolar wall | 9.90e-11 | 3 |
tracheobronchial tree | 1.71e-08 | 15 |
lower respiratory tract | 1.71e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.05e-15 | 2 |
non-small cell lung carcinoma | 6.04e-07 | 5 |