FFCP PHASE1:Hg19::chr15:37392703..37392717,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:37392703..37392717,- to FFCP PHASE1:Hg19::chr15:37392703..37392717,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4212 | |EntrezGene=4212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7001 | |HGNC=7001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000382766,ENST00000444725,uc001zjo.2,uc001zjp.2,uc001zjr.2,uc001zjs.2_5end | |||
|cluster_id=chr15:37392703..37392717,- | |||
|coexpression_cluster_id=C1403 | |||
|description=CAGE_peak_8_at_MEIS2_5end | |||
|id=chr15:37392703..37392717,- | |||
|ontology_enrichment_celltype=CL:0000055!2.43e-08!180;CL:0002620!2.49e-08!23;CL:0000057!8.70e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.06e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.18e-09,23;CL:0002319,9.75e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.01e-14!365;UBERON:0005743!1.59e-11!86;UBERON:0000481!2.10e-11!347;UBERON:0000073!3.43e-11!94;UBERON:0001016!3.43e-11!94;UBERON:0004111!3.93e-11!241;UBERON:0000483!4.47e-11!309;UBERON:0001017!9.37e-11!82;UBERON:0000119!2.30e-10!312;UBERON:0002346!5.37e-10!90;UBERON:0003075!8.58e-10!86;UBERON:0007284!8.58e-10!86;UBERON:0000025!9.63e-10!194;UBERON:0001049!1.63e-09!57;UBERON:0005068!1.63e-09!57;UBERON:0006241!1.63e-09!57;UBERON:0007135!1.63e-09!57;UBERON:0000955!1.97e-09!69;UBERON:0006238!1.97e-09!69;UBERON:0002020!2.23e-09!34;UBERON:0003528!2.23e-09!34;UBERON:0000480!2.48e-09!626;UBERON:0000467!2.59e-09!625;UBERON:0001893!7.46e-09!34;UBERON:0001869!7.96e-09!32;UBERON:0002791!8.13e-09!33;UBERON:0000477!8.89e-09!286;UBERON:0000468!1.92e-08!659;UBERON:0000062!2.10e-08!511;UBERON:0007023!2.70e-08!115;UBERON:0000924!4.45e-08!173;UBERON:0006601!4.45e-08!173;UBERON:0003080!6.93e-08!42;UBERON:0004121!7.80e-08!169;UBERON:0002780!1.25e-07!41;UBERON:0001890!1.25e-07!41;UBERON:0006240!1.25e-07!41;UBERON:0002616!2.78e-07!59;UBERON:0003056!7.07e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.25e-09;34!UBERON:0002020;7.25e-09;34!UBERON:0002791;1.19e-08;32!UBERON:0001869;1.33e-08;32!UBERON:0001893;2.52e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.85e-10,34;UBERON:0002020,6.85e-10,34;UBERON:0001017,2.42e-09,81;UBERON:0002791,3.71e-09,32;UBERON:0001869,3.71e-09,32;UBERON:0010314,6.01e-09,132;UBERON:0002346,9.92e-09,86;UBERON:0001049,1.26e-08,56;UBERON:0005068,1.26e-08,56;UBERON:0006241,1.26e-08,56;UBERON:0007135,1.26e-08,56;UBERON:0003075,1.85e-08,82;UBERON:0007284,1.85e-08,82;UBERON:0001016,3.10e-08,89;UBERON:0001893,3.35e-08,34;UBERON:0000073,1.69e-07,53;UBERON:0002616,1.69e-07,53;UBERON:0002780,2.59e-07,41;UBERON:0001890,2.59e-07,41;UBERON:0003080,2.59e-07,41;UBERON:0006240,2.59e-07,41;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0004111,7.54e-07,240;UBERON:0000025,7.89e-07,192 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0.737201809504527,0,0.655324116390517,0.263766978228454,0.123766352960047,0,1.34465029290355,0,2.19093027116212,0.487932798790507,0.738726348460727,1.63200552995402,2.82109249330279,6.5834277040143,7.39121895393575,4.3939923858181,0.534893840235659,0.903106483949403,0.865818594450472,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,1.2786256184353,0,0,0.144846518960824,0,0,0.567208902984407,1.33037638477538,2.45937399940753,1.11332214173056,0.364295288292542,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.694281003215189,0,1.25849830862972,1.10047216776027,0.835979866147242,0.775250277507987,1.77883131343355,0.33472061276467,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0.446498641420399,0.44905874525234,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,1.13967460498122,1.19168262731897,5.16305917347865,1.41867352879343,2.24271040056923,1.06748995729705,1.97334038733728,4.04574346019696,0.942974704487816,2.61539044981534,0,0,0,0,0.570471821544449,1.19558944441441,0.939475989150119,1.45685649931318,1.26405726032024,0.61246251376468,0.245668634623536,1.03325781175765,0,0,3.64064544775211,0.718618141816238,0.505008341862199,0.750711119231785,0.277064115484183,0,0.919463387397059,0.300476117813194,0.226864366320042,17.7595739331973,1.06778694409284,4.4505699243508,10.5031883629541,4.74041634496819,10.5632621418708,2.97786970130544,2.86919764810153,3.21542117031955,28.7774502638291,4.78659472939957,0.161646056818812,25.5606906611962,6.54888638479662,5.08681776931463,0,0.272746120590835,0.286804595389004,0,0,0.464775771478074,0.518305275076852,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0,0.588664395376038,0,4.42893272774789,1.40241773803446,2.057870056657,7.3504355692771,0,0,1.18157981336281,0,0.614942192715568,0.514703430895577,0,0,0,0.185176890317059,0.325808305310325,0,0,1.15930404975077,0.587043471179108,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0,1.47798971368783,1.58487181223807,1.4512968087854,2.30591925467138,2.01987893482208,0,0,0,1.71072446022705,0,0,0,0,0,0,0.646358578788889,0,1.690605505112,0.531876233169741,2.08014873822732,1.02882949704857,0,1.0656887160644,1.28680194292333,0.542621605391443,0,1.62868092146868,1.06617584622764,0,3.01439377059586,0,3.79897366491817,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,3.55732473911449,5.20559415430487,3.09315525111078,7.53823194004569,3.82763250991898,0,0,0,0,1.00034104211935,0.271265023699736,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,1.99267679560631,1.10621501125022,2.34585759063824,0.195801157462741,0.686286847621712,0,0,0,0,0,0.907170879989041,0.248107807818777,0.767309866440312,0.280660094433074,0.384417447767103,0.511707249066704,0.804269605718038,1.48418066444991,1.23367755042124,0.710246901252508,1.56041596426237,0.519254429183621,1.74315567689939,0.241718899183244,0.601519410909855,0.644566922551274,1.7222167224691,0.910455840033585,3.93373244878272,0,0.308061348417659,0.784349769176855,0,0.211103257785751,3.4120015221269,2.38131187387122,1.72732732881711,0,0.812839312631559,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,1.53870075069834,2.62411716559765,1.30151357865721,0.412164046590889,1.28197250745681,1.07262349896764,0,0,0,0.676695028044854,4.00526404498075,1.5350367472613,1.10269257987624,1.07420244868274,1.30515024522806,0.93749290157711,0.267096106940212,0,0,0.127612712494584,0.2023155617111,2.32422774648643,2.83331112147576,0,1.54016790088044,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,1.33441135746677,1.27948895655667,0.855877976067841,0,0,3.77732160924961,4.66712950551293,3.88780927740765,0.202182481573316,0,1.26377536871694,3.41343617362713,0.974853958525138,0,1.77449884830381,1.69686518344455,0,1.10273068709225,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0.563391205064483,3.87210650950939,0.687743287091848,0,1.06428319221179,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,1.03558180854457,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,0.735120647943095,0.371606350251437,0,0.640276590135727,0,0,0,0,0.649243880549111,0,0.456469358066384,0.313359791546046,2.50634477090067,0,1.2847046008296,0.80719882876419,0,0.343505344755765,0,0,0,0.390776190804081,1.11362469558097,0,1.6227340708559,0,0,0.748562161632879,0.293016358543788,2.91265252198832,0.66866030566487,0,0.23874448473769,1.48482340416319,0.614321404198464,0,1.54736358051564,0.89046964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|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0,0.737201809504527,0,0.655324116390517,0.263766978228454,0.123766352960047,0,1.34465029290355,0,2.19093027116212,0.487932798790507,0.738726348460727,1.63200552995402,2.82109249330279,6.5834277040143,7.39121895393575,4.3939923858181,0.534893840235659,0.903106483949403,0.865818594450472,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,1.2786256184353,0,0,0.144846518960824,0,0,0.567208902984407,1.33037638477538,2.45937399940753,1.11332214173056,0.364295288292542,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.694281003215189,0,1.25849830862972,1.10047216776027,0.835979866147242,0.775250277507987,1.77883131343355,0.33472061276467,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0.446498641420399,0.44905874525234,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,1.13967460498122,1.19168262731897,5.16305917347865,1.41867352879343,2.24271040056923,1.06748995729705,1.97334038733728,4.04574346019696,0.942974704487816,2.61539044981534,0,0,0,0,0.570471821544449,1.19558944441441,0.939475989150119,1.45685649931318,1.26405726032024,0.61246251376468,0.245668634623536,1.03325781175765,0,0,3.64064544775211,0.718618141816238,0.505008341862199,0.750711119231785,0.277064115484183,0,0.919463387397059,0.300476117813194,0.226864366320042,17.7595739331973,1.06778694409284,4.4505699243508,10.5031883629541,4.74041634496819,10.5632621418708,2.97786970130544,2.86919764810153,3.21542117031955,28.7774502638291,4.78659472939957,0.161646056818812,25.5606906611962,6.54888638479662,5.08681776931463,0,0.272746120590835,0.286804595389004,0,0,0.464775771478074,0.518305275076852,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0,0.588664395376038,0,4.42893272774789,1.40241773803446,2.057870056657,7.3504355692771,0,0,1.18157981336281,0,0.614942192715568,0.514703430895577,0,0,0,0.185176890317059,0.325808305310325,0,0,1.15930404975077,0.587043471179108,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0.179117045405697,0,0,1.47798971368783,1.58487181223807,1.4512968087854,2.30591925467138,2.01987893482208,0,0,0,1.71072446022705,0,0,0,0,0,0,0.646358578788889,0,1.690605505112,0.531876233169741,2.08014873822732,1.02882949704857,0,1.0656887160644,1.28680194292333,0.542621605391443,0,1.62868092146868,1.06617584622764,0,3.01439377059586,0,3.79897366491817,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,3.55732473911449,5.20559415430487,3.09315525111078,7.53823194004569,3.82763250991898,0,0,0,0,1.00034104211935,0.271265023699736,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,1.99267679560631,1.10621501125022,2.34585759063824,0.195801157462741,0.686286847621712,0,0,0,0,0,0.907170879989041,0.248107807818777,0.767309866440312,0.280660094433074,0.384417447767103,0.511707249066704,0.804269605718038,1.48418066444991,1.23367755042124,0.710246901252508,1.56041596426237,0.519254429183621,1.74315567689939,0.241718899183244,0.601519410909855,0.644566922551274,1.7222167224691,0.910455840033585,3.93373244878272,0,0.308061348417659,0.784349769176855,0,0.211103257785751,3.4120015221269,2.38131187387122,1.72732732881711,0,0.812839312631559,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,1.53870075069834,2.62411716559765,1.30151357865721,0.412164046590889,1.28197250745681,1.07262349896764,0,0,0,0.676695028044854,4.00526404498075,1.5350367472613,1.10269257987624,1.07420244868274,1.30515024522806,0.93749290157711,0.267096106940212,0,0,0.127612712494584,0.2023155617111,2.32422774648643,2.83331112147576,0,1.54016790088044,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,1.33441135746677,1.27948895655667,0.855877976067841,0,0,3.77732160924961,4.66712950551293,3.88780927740765,0.202182481573316,0,1.26377536871694,3.41343617362713,0.974853958525138,0,1.77449884830381,1.69686518344455,0,1.10273068709225,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0.563391205064483,3.87210650950939,0.687743287091848,0,1.06428319221179,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,1.03558180854457,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,0.735120647943095,0.371606350251437,0,0.640276590135727,0,0,0,0,0.649243880549111,0,0.456469358066384,0.313359791546046,2.50634477090067,0,1.2847046008296,0.80719882876419,0,0.343505344755765,0,0,0,0.390776190804081,1.11362469558097,0,1.6227340708559,0,0,0.748562161632879,0.293016358543788,2.91265252198832,0.66866030566487,0,0.23874448473769,1.48482340416319,0.614321404198464,0,1.54736358051564,0.89046964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| ||
|short_description=p8@MEIS2 | |||
}} | }} |
Latest revision as of 08:31, 17 September 2015
Short description: | p8@MEIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MEIS2_5end |
Coexpression cluster: | C1403_occipital_Fibroblast_parietal_normal_duodenum_temporal_Neurons |
Association with transcript: | 0bp_to_ENST00000382766, ENST00000444725, uc001zjo.2, uc001zjp.2, uc001zjr.2, uc001zjs.2_5end |
EntrezGene: | MEIS2 |
HGNC: | 7001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.18e-09 | 23 |
neural cell | 9.75e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.85e-10 | 34 |
gray matter | 6.85e-10 | 34 |
central nervous system | 2.42e-09 | 81 |
regional part of telencephalon | 3.71e-09 | 32 |
cerebral hemisphere | 3.71e-09 | 32 |
structure with developmental contribution from neural crest | 6.01e-09 | 132 |
neurectoderm | 9.92e-09 | 86 |
neural tube | 1.26e-08 | 56 |
neural rod | 1.26e-08 | 56 |
future spinal cord | 1.26e-08 | 56 |
neural keel | 1.26e-08 | 56 |
neural plate | 1.85e-08 | 82 |
presumptive neural plate | 1.85e-08 | 82 |
nervous system | 3.10e-08 | 89 |
telencephalon | 3.35e-08 | 34 |
regional part of nervous system | 1.69e-07 | 53 |
regional part of brain | 1.69e-07 | 53 |
regional part of forebrain | 2.59e-07 | 41 |
forebrain | 2.59e-07 | 41 |
anterior neural tube | 2.59e-07 | 41 |
future forebrain | 2.59e-07 | 41 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
anatomical conduit | 7.54e-07 | 240 |
tube | 7.89e-07 | 192 |