FFCP PHASE1:Hg19::chr15:37392576..37392589,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:37392576..37392589,- to FFCP PHASE1:Hg19::chr15:37392576..37392589,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4212 | |EntrezGene=4212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7001 | |HGNC=7001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=114bp_to_ENST00000382766,ENST00000444725,uc001zjo.2,uc001zjp.2,uc001zjr.2,uc001zjs.2_5end | |||
|cluster_id=chr15:37392576..37392589,- | |||
|coexpression_cluster_id=C1403 | |||
|description=CAGE_peak_12_at_MEIS2_5end | |||
|id=chr15:37392576..37392589,- | |||
|ontology_enrichment_celltype=CL:0002620!8.13e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.68e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.85e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.36e-14!86;UBERON:0001017!1.59e-13!82;UBERON:0000073!3.09e-13!94;UBERON:0001016!3.09e-13!94;UBERON:0001049!2.05e-12!57;UBERON:0005068!2.05e-12!57;UBERON:0006241!2.05e-12!57;UBERON:0007135!2.05e-12!57;UBERON:0000475!4.55e-12!365;UBERON:0000955!5.19e-12!69;UBERON:0006238!5.19e-12!69;UBERON:0002020!1.11e-11!34;UBERON:0003528!1.11e-11!34;UBERON:0002346!1.44e-11!90;UBERON:0003075!1.65e-11!86;UBERON:0007284!1.65e-11!86;UBERON:0002780!1.65e-11!41;UBERON:0001890!1.65e-11!41;UBERON:0006240!1.65e-11!41;UBERON:0001869!1.78e-11!32;UBERON:0004111!5.92e-11!241;UBERON:0003080!7.80e-11!42;UBERON:0002791!1.25e-10!33;UBERON:0001893!1.64e-10!34;UBERON:0002616!2.48e-10!59;UBERON:0000025!4.47e-10!194;UBERON:0000956!4.37e-09!25;UBERON:0000203!4.37e-09!25;UBERON:0007023!1.28e-08!115;UBERON:0003056!1.66e-08!61;UBERON:0000481!2.44e-08!347;UBERON:0000477!1.53e-07!286;UBERON:0000924!1.87e-07!173;UBERON:0006601!1.87e-07!173;UBERON:0000033!2.21e-07!123;UBERON:0004121!2.73e-07!169;UBERON:0002619!2.80e-07!22;UBERON:0000467!6.23e-07!625;UBERON:0000468!7.00e-07!659;UBERON:0000483!7.08e-07!309;UBERON:0000062!7.86e-07!511;UBERON:0001950!8.05e-07!20;UBERON:0000480!8.83e-07!626;UBERON:0000153!9.60e-07!129;UBERON:0007811!9.60e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.36e-08;34!UBERON:0002020;3.36e-08;34!UBERON:0002791;1.05e-07;32!UBERON:0002780;1.78e-07;41!UBERON:0001890;1.78e-07;41!UBERON:0001869;1.88e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.29e-09,41;UBERON:0001890,1.29e-09,41;UBERON:0003080,1.29e-09,41;UBERON:0006240,1.29e-09,41;UBERON:0003528,3.55e-09,34;UBERON:0002020,3.55e-09,34;UBERON:0001017,9.89e-09,81;UBERON:0000073,3.26e-08,53;UBERON:0002616,3.26e-08,53;UBERON:0002791,5.30e-08,32;UBERON:0001869,5.30e-08,32;UBERON:0000955,5.93e-08,68;UBERON:0006238,5.93e-08,68;UBERON:0001016,6.57e-08,89;UBERON:0003056,6.67e-08,61;UBERON:0001049,2.22e-07,56;UBERON:0005068,2.22e-07,56;UBERON:0006241,2.22e-07,56;UBERON:0007135,2.22e-07,56;UBERON:0003075,3.06e-07,82;UBERON:0007284,3.06e-07,82;UBERON:0001893,3.13e-07,34;UBERON:0002346,4.05e-07,86 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,1.78784437770915,0.872338524100369,2.53299878168311,0,0,0,0,0,1.31883489114227,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.612002073732759,0.313454721478088,6.5834277040143,8.07559107930017,5.52387614217132,1.14620108621927,1.06730766284929,1.33808328233255,0,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.767175371061182,0.361439152384566,0,0,0,0.486634870302636,1.32348744029695,2.21729397462564,1.14185221401064,0.327447688744282,0,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0.694281003215189,2.26123176769604,1.25849830862972,2.20094433552054,0.208994966536811,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0.367663080345869,2.43042584364528,0.267899184852239,0.898117490504679,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.886413581652058,0.132409180813219,2.58152958673932,0.354668382198357,1.68203280042692,1.06748995729705,1.2333377420858,2.17847724779836,0.538842688278752,3.26923806226917,0.151357427644931,0,0,0,1.1409436430889,0,0.352303495931295,0.323745888736263,0.842704840213491,0.61246251376468,0,0.206651562351531,0,0,0,1.43723628363248,0,0.125118519871964,0,0,0,0,1.47461838108027,11.1221574127094,1.70845911054854,0.847727604638247,7.50227740211006,3.81294358182224,5.41045134095821,1.67505170698431,2.70042131586026,3.80004320128675,12.8741224864498,3.77404584433427,0,11.3603069605317,5.64211750074785,1.69560592310488,0,0,0,0,0.132529768321485,0.69716365721711,0.621966330092223,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,3.69077727312324,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.695582429850461,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,3.4486426652716,0.880484340132261,0.621984346622316,1.58531948758658,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0,0.823240336780769,0.977208552881205,1.42156779497018,0.791951872933429,1.50719688529793,0,4.39881161201051,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,7.11464947822898,1.30139853857622,10.8260433788877,3.51784157202132,8.29320377149112,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,2.0694614258501,0,0.553107505625109,1.56390506042549,0,0,0,0,0,0,0,0.907170879989041,0.248107807818777,0.306923946576125,1.40330047216537,0.256278298511402,0.511707249066704,0.321707842287215,1.48418066444991,1.07946785661859,0.887808626565635,0.9033987161519,1.03850885836724,0.813472649219715,0.362578348774867,0.40101294060657,0.0920809889358963,0.459257792658427,1.0925470080403,2.62248829918848,0,0.15403067420883,0,0,0,11.3733384070897,5.27290486357199,4.53423423814493,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0.656029291399411,1.30151357865721,0.103041011647722,3.20493126864202,1.73269949833235,0,0,0,0,2.46477787383431,1.38153307253517,0.551346289938122,0.537101224341368,0.580066775656914,0.767039646744908,0.0890320356467374,0,0.192190067365106,0,0,0.464845549297286,2.51849877464512,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,0,0,0.571890581771475,0,0,0,1.56989728039846,1.61885211824983,6.31435168392926,3.06312246098785,0,0,0,0.975267478179181,2.19342140668156,0,0.272999822815972,1.27264888758341,0,0,0.66343897524122,0,0,0,0.202910376962704,0.6196469961995,0,1.43411352204052,0.392996164052485,0,1.41904425628239,0.422215270595328,0,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,2.13648142254946,0.962479855263359,0.245040215981032,0.185803175125719,0,0.355709216742071,0,0,0,0,0.324621940274555,0,0,0.783399478865116,0,0.169291777801603,2.24823305145179,0.605399121573143,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0.390776190804081,1.9488432172667,0,0.270455678475983,0,0,0.37428108081644,0,2.91265252198832,0.780103689942349,0,0,0.296964680832639,0,0.994147647766298,2.11004124615769,0.333926115068718,0,0,0.597743964753209,0.276283915531148,5.54252045279407,1.1249555075237,3.07712013652674,0.311039587661807,0.179736702294654,0,0,1.1837208676432,0,0,0,0.463840490809256,3.99227596002388,0.520855522170466,0.0874599999961957,0,0,0.508507300585533,0,0.344743373241465,0,1.21537496453305,7.08593108651071,10.4918901604105,3.05163472634166,0.774054819518572,0.886642856860642,0.87754158861589,0,0.41827123283581,2.00070672109872,0,0,0,0.217294743844016,0.31900115973192,0.274792780205587,0,0,0,0,0.4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| ||
|short_description=p12@MEIS2 | |||
}} | }} |
Latest revision as of 08:29, 17 September 2015
Short description: | p12@MEIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MEIS2_5end |
Coexpression cluster: | C1403_occipital_Fibroblast_parietal_normal_duodenum_temporal_Neurons |
Association with transcript: | 114bp_to_ENST00000382766, ENST00000444725, uc001zjo.2, uc001zjp.2, uc001zjr.2, uc001zjs.2_5end |
EntrezGene: | MEIS2 |
HGNC: | 7001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.85e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 1.29e-09 | 41 |
forebrain | 1.29e-09 | 41 |
anterior neural tube | 1.29e-09 | 41 |
future forebrain | 1.29e-09 | 41 |
brain grey matter | 3.55e-09 | 34 |
gray matter | 3.55e-09 | 34 |
central nervous system | 9.89e-09 | 81 |
regional part of nervous system | 3.26e-08 | 53 |
regional part of brain | 3.26e-08 | 53 |
regional part of telencephalon | 5.30e-08 | 32 |
cerebral hemisphere | 5.30e-08 | 32 |
brain | 5.93e-08 | 68 |
future brain | 5.93e-08 | 68 |
nervous system | 6.57e-08 | 89 |
pre-chordal neural plate | 6.67e-08 | 61 |
neural tube | 2.22e-07 | 56 |
neural rod | 2.22e-07 | 56 |
future spinal cord | 2.22e-07 | 56 |
neural keel | 2.22e-07 | 56 |
neural plate | 3.06e-07 | 82 |
presumptive neural plate | 3.06e-07 | 82 |
telencephalon | 3.13e-07 | 34 |
neurectoderm | 4.05e-07 | 86 |