FFCP PHASE1:Hg19::chr11:2159824..2159832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt=P01344 | |UniProt=P01344 | ||
|association_with_transcript=371bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | |association_with_transcript=371bp_to_ENST00000381406,NM_000612,uc001lvg.2_5end | ||
|cluster_id=chr11:2159824..2159832,- | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_39_at_IGF2_5end | |description=CAGE_peak_39_at_IGF2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.47e-24;19!CL:0002541;2.46e-11;3!CL:0002577;3.41e-11;3!CL:0002575;3.14e-08;2!CL:0002536;4.86e-08;2!CL:0002537;4.23e-07;5 | |ontology_enrichment_celltype_v019=CL:0000349;2.47e-24;19!CL:0002541;2.46e-11;3!CL:0002577;3.41e-11;3!CL:0002575;3.14e-08;2!CL:0002536;4.86e-08;2!CL:0002537;4.23e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.75e-24,19;CL:0002541,2.59e-11,3;CL:0002577,3.65e-11,3;CL:0002575,3.20e-08,2;CL:0002536,5.04e-08,2;CL:0002537,4.24e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.31e-08;11 | |ontology_enrichment_development_v019=UBERON:0004161;5.31e-08;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.42e-13!14;UBERON:0000158!5.42e-13!14;UBERON:0000478!6.16e-10!24;UBERON:0003124!7.22e-10!7;UBERON:0006554!8.85e-07!44 | |ontology_enrichment_uberon=UBERON:0005631!5.42e-13!14;UBERON:0000158!5.42e-13!14;UBERON:0000478!6.16e-10!24;UBERON:0003124!7.22e-10!7;UBERON:0006554!8.85e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-25;24!UBERON:0005631;1.00e-21;10!UBERON:0000158;1.00e-21;10!UBERON:0001987;2.65e-14;4!UBERON:0000305;1.06e-12;7!UBERON:0003124;2.46e-11;3!UBERON:0000920;2.46e-11;3!UBERON:0000922;4.37e-09;49 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-25;24!UBERON:0005631;1.00e-21;10!UBERON:0000158;1.00e-21;10!UBERON:0001987;2.65e-14;4!UBERON:0000305;1.06e-12;7!UBERON:0003124;2.46e-11;3!UBERON:0000920;2.46e-11;3!UBERON:0000922;4.37e-09;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.44e-34,14;UBERON:0000158,6.44e-34,14;UBERON:0000478,1.26e-25,24;UBERON:0003124,7.87e-24,7;UBERON:0001987,2.94e-14,4;UBERON:0004340,2.94e-14,4;UBERON:0000305,1.09e-12,7;UBERON:0000920,2.59e-11,3;UBERON:0004871,4.70e-11,8;UBERON:0004923,4.08e-07,66 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,5.46103430325431,13.1883489114227,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.612002073732759,0.626909442956176,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,2.88087962239999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04574548582567,0.725627385107593,0.504641701751257,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2988438543114,0,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,2.61576041299968,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,9.22456729165453,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,1.64381058040307,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.96306386750624,0,0,0.623912584592421,1.24900292158013,0.473107245101804,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,8.2236486134351,24.0200396667599,0,0,0,3.03127571446259,6.65741758041988,26.0055652263525,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,18.249776888335,0,0.184161977871793,0,0,0.655622074797121,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0,1.95777922130672,0.0915694648183434,0.247528499761764,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0.107420244868274,0,0.596586391912706,2.40386496246191,0,0.192190067365106,0,0.30347334256665,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0.38126038784765,0,0.855877976067841,0,0,0.539617372749944,0,0,0,0,0,0.48763373908959,0,0,0.682499557039929,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,1.60044461320525,0.43050537267123,0,0.886860307073351,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,14.0859245995237,8.61197574414652,40.8523733791979,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.692552326534174,0,3.4584585658209,0,0,12.1220440698129,2.56473261525214,129.527450572528,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,1.22206028986725,0,0,0,0,18.4592858878721,0,0,0,0,0.789168805698781,4.83962864194656,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0,0,2.71176888936639,0.137041924646751,0,0,0,0,0,3.19695375331408,0,0,26.2540346728806,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.998395002494955,0,0.223171457441873,1.5452198671947,0,0,15.5990700968303,14.340359358323,13.4133052269828,4.2323817051342,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.996637174564964,0.105600336519406,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,51.6776866757663,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,1.60011105865261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,1.39241355481392,0.601682626794058,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,6.65267776219791,0,0,0.0679697329768317,0,0,0,0.156986185701028,0.157115589916002,1.12108865325516,1.82631744101899,0,0,0.78624198594322,0,0,5.9111812582877,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.365753774946808,0,0.205325613712494,46.392577253528,1.45713297917742,0,10.7433418587139,0,0,0,0,0.0771741581079447,1.5299169235277,0,0.245148321753905,0,0.392616934229891,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,4.7612415646386,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0.606229585745915,0,0,0,0.213233981900981,6.66580408098473,0.0645889098360061,0.496597714366863,0,0,1.81905470062397,0.217716747896961,33.8810968074428,0,0.0717222053926763,7.65118820055831,0.244209805832924,0,0,0.359300808426348,9.38563769613817,0.244482888365733,3.66206560484165,0,0.201273793591026,0 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| ||
|short_description=p39@IGF2 | |short_description=p39@IGF2 | ||
}} | }} |
Latest revision as of 08:23, 17 September 2015
Short description: | p39@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 371bp_to_ENST00000381406, NM_000612, uc001lvg.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.75e-24 | 19 |
chorionic membrane mesenchymal stem cell | 2.59e-11 | 3 |
placental epithelial cell | 3.65e-11 | 3 |
central nervous system pericyte | 3.20e-08 | 2 |
amniotic epithelial cell | 5.04e-08 | 2 |
amnion mesenchymal stem cell | 4.24e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.44e-34 | 14 |
membranous layer | 6.44e-34 | 14 |
extraembryonic structure | 1.26e-25 | 24 |
chorion | 7.87e-24 | 7 |
placenta | 2.94e-14 | 4 |
allantois | 2.94e-14 | 4 |
amnion | 1.09e-12 | 7 |
egg chorion | 2.59e-11 | 3 |
somatic layer of lateral plate mesoderm | 4.70e-11 | 8 |
organ component layer | 4.08e-07 | 66 |