FFCP PHASE1:Hg19::chr6:25963052..25963067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10475 | |EntrezGene=10475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10059 | |HGNC=10059 | ||
|TSSclassifier=strong | |||
|UniProt=O00635 | |UniProt=O00635 | ||
|association_with_transcript=-3bp_to_NM_006355,uc003nfm.2_5end | |association_with_transcript=-3bp_to_NM_006355,uc003nfm.2_5end | ||
|cluster_id=chr6:25963052..25963067,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_2_at_TRIM38_5end | |description=CAGE_peak_2_at_TRIM38_5end | ||
|id=chr6:25963052..25963067,+ | |id=chr6:25963052..25963067,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.38e-59!140;CL:0000037!3.29e-57!172;CL:0000566!3.29e-57!172;CL:0002032!6.59e-54!165;CL:0000837!6.59e-54!165;CL:0000988!1.35e-50!182;CL:0002031!2.96e-49!124;CL:0002087!3.31e-49!119;CL:0000766!3.83e-33!76;CL:0000763!3.21e-32!112;CL:0000049!3.21e-32!112;CL:0000557!1.05e-29!71;CL:0002009!2.83e-28!65;CL:0000839!3.33e-28!70;CL:0000134!6.25e-28!358;CL:0002057!1.44e-27!42;CL:0002194!2.02e-27!63;CL:0000576!2.02e-27!63;CL:0000040!2.02e-27!63;CL:0000559!2.02e-27!63;CL:0002320!9.07e-26!365;CL:0000860!3.43e-24!45;CL:0000048!1.89e-21!430;CL:0000723!1.29e-19!436;CL:0000542!5.35e-19!53;CL:0000051!5.35e-19!53;CL:0000034!6.74e-19!444;CL:0000219!7.19e-19!390;CL:0000838!9.37e-19!52;CL:0000945!2.29e-11!24;CL:0000826!2.29e-11!24;CL:0000236!1.69e-08!14;CL:0000791!1.77e-07!18;CL:0000789!1.77e-07!18;CL:0002420!1.77e-07!18;CL:0002419!1.77e-07!18;CL:0000790!1.77e-07!18;CL:0000084!1.99e-07!25;CL:0000827!1.99e-07!25 | |ontology_enrichment_celltype=CL:0000738!1.38e-59!140;CL:0000037!3.29e-57!172;CL:0000566!3.29e-57!172;CL:0002032!6.59e-54!165;CL:0000837!6.59e-54!165;CL:0000988!1.35e-50!182;CL:0002031!2.96e-49!124;CL:0002087!3.31e-49!119;CL:0000766!3.83e-33!76;CL:0000763!3.21e-32!112;CL:0000049!3.21e-32!112;CL:0000557!1.05e-29!71;CL:0002009!2.83e-28!65;CL:0000839!3.33e-28!70;CL:0000134!6.25e-28!358;CL:0002057!1.44e-27!42;CL:0002194!2.02e-27!63;CL:0000576!2.02e-27!63;CL:0000040!2.02e-27!63;CL:0000559!2.02e-27!63;CL:0002320!9.07e-26!365;CL:0000860!3.43e-24!45;CL:0000048!1.89e-21!430;CL:0000723!1.29e-19!436;CL:0000542!5.35e-19!53;CL:0000051!5.35e-19!53;CL:0000034!6.74e-19!444;CL:0000219!7.19e-19!390;CL:0000838!9.37e-19!52;CL:0000945!2.29e-11!24;CL:0000826!2.29e-11!24;CL:0000236!1.69e-08!14;CL:0000791!1.77e-07!18;CL:0000789!1.77e-07!18;CL:0002420!1.77e-07!18;CL:0002419!1.77e-07!18;CL:0000790!1.77e-07!18;CL:0000084!1.99e-07!25;CL:0000827!1.99e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.12e-22;33!CL:0002057;3.12e-22;33!CL:0000473;1.05e-20;39!CL:0000234;1.05e-20;39!CL:0000576;2.30e-19;48!CL:0000766;1.57e-16;69!CL:0002087;1.61e-15;104!CL:0000738;3.68e-14;136!CL:0000542;2.62e-12;53!CL:0000945;4.06e-12;24!CL:0000763;8.91e-11;100!CL:0000988;2.41e-09;177!CL:0000236;7.65e-09;13!CL:0000791;5.58e-08;18!CL:0000789;5.58e-08;18!CL:0002419;5.58e-08;18!CL:0000084;1.73e-07;25!CL:0000219;2.03e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.35e-65,136;CL:0000037,9.34e-63,168;CL:0002032,3.34e-59,161;CL:0000837,3.34e-59,161;CL:0000988,3.93e-56,177;CL:0002087,4.50e-54,115;CL:0002031,4.69e-54,120;CL:0000766,1.12e-37,72;CL:0000763,2.18e-36,108;CL:0000049,2.18e-36,108;CL:0000557,6.50e-34,67;CL:0002009,1.81e-32,61;CL:0000839,3.13e-32,66;CL:0000473,5.30e-32,48;CL:0000234,5.30e-32,48;CL:0002194,1.48e-31,59;CL:0000576,1.48e-31,59;CL:0000040,1.48e-31,59;CL:0000559,1.48e-31,59;CL:0000860,1.88e-29,42;CL:0002057,1.88e-29,42;CL:0000134,3.96e-29,354;CL:0002320,1.47e-26,361;CL:0000048,2.41e-22,427;CL:0000723,8.29e-21,433;CL:0000219,8.73e-21,386;CL:0000034,2.48e-20,441;CL:0000542,1.04e-19,53;CL:0000051,1.04e-19,53;CL:0000838,1.90e-19,52;CL:0000945,4.49e-12,24;CL:0000826,4.49e-12,24;CL:0000236,5.33e-09,14;CL:0000791,6.59e-08,18;CL:0000789,6.59e-08,18;CL:0002420,6.59e-08,18;CL:0002419,6.59e-08,18;CL:0000790,6.59e-08,18;CL:0000084,2.14e-07,25;CL:0000827,2.14e-07,25;CL:0002393,7.35e-07,9;CL:0002397,7.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-21;42!CL:0000051;2.62e-12;53!CL:0000049;2.56e-10;108!CL:0000790;5.58e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.80e-34!102;UBERON:0003061!8.80e-34!102;UBERON:0002193!1.02e-31!112;UBERON:0002371!3.23e-27!80;UBERON:0002384!1.62e-23!375;UBERON:0001474!1.75e-23!86;UBERON:0002405!7.46e-21!115;UBERON:0004765!2.50e-19!101;UBERON:0001434!2.50e-19!101;UBERON:0003081!4.79e-15!216;UBERON:0002204!1.94e-11!167 | |ontology_enrichment_uberon=UBERON:0002390!8.80e-34!102;UBERON:0003061!8.80e-34!102;UBERON:0002193!1.02e-31!112;UBERON:0002371!3.23e-27!80;UBERON:0002384!1.62e-23!375;UBERON:0001474!1.75e-23!86;UBERON:0002405!7.46e-21!115;UBERON:0004765!2.50e-19!101;UBERON:0001434!2.50e-19!101;UBERON:0003081!4.79e-15!216;UBERON:0002204!1.94e-11!167 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@TRIM38 | |short_description=p2@TRIM38 | ||
}} | }} |
Latest revision as of 08:12, 17 September 2015
Short description: | p2@TRIM38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM38_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -3bp_to_NM_006355, uc003nfm.2_5end |
EntrezGene: | TRIM38 |
HGNC: | 10059 |
UniProt: | O00635 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.05e-37 | 98 |
blood island | 3.05e-37 | 98 |
hemolymphoid system | 4.46e-35 | 108 |
bone marrow | 1.23e-30 | 76 |
immune system | 1.28e-30 | 93 |
bone element | 1.24e-26 | 82 |
connective tissue | 1.17e-24 | 371 |
skeletal element | 4.57e-22 | 90 |
skeletal system | 3.62e-20 | 100 |
lateral plate mesoderm | 7.83e-19 | 203 |
musculoskeletal system | 1.28e-11 | 167 |
mesoderm | 2.81e-08 | 315 |
mesoderm-derived structure | 2.81e-08 | 315 |
presumptive mesoderm | 2.81e-08 | 315 |