FFCP PHASE1:Hg19::chr6:25279759..25279783,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:25279759..25279783,+ to FFCP PHASE1:Hg19::chr6:25279759..25279783,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55604 | |EntrezGene=55604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21581 | |HGNC=21581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-91bp_to_ENST00000377969_5end | |||
|cluster_id=chr6:25279759..25279783,+ | |||
|description=CAGE_peak_4_at_LRRC16A_5end | |||
|id=chr6:25279759..25279783,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.81e-07;29 | |||
|ontology_enrichment_disease=DOID:305!3.10e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-19!115;UBERON:0001017!3.88e-15!82;UBERON:0005743!1.76e-14!86;UBERON:0001049!2.62e-14!57;UBERON:0005068!2.62e-14!57;UBERON:0006241!2.62e-14!57;UBERON:0007135!2.62e-14!57;UBERON:0000064!8.23e-13!219;UBERON:0003080!1.16e-12!42;UBERON:0002780!1.80e-12!41;UBERON:0001890!1.80e-12!41;UBERON:0006240!1.80e-12!41;UBERON:0001869!2.84e-12!32;UBERON:0001893!6.67e-12!34;UBERON:0002020!7.53e-12!34;UBERON:0003528!7.53e-12!34;UBERON:0002791!2.02e-11!33;UBERON:0002616!2.63e-11!59;UBERON:0000073!2.72e-11!94;UBERON:0001016!2.72e-11!94;UBERON:0000955!7.77e-11!69;UBERON:0006238!7.77e-11!69;UBERON:0003075!1.40e-10!86;UBERON:0007284!1.40e-10!86;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0004121!3.54e-10!169;UBERON:0002346!5.15e-10!90;UBERON:0002619!6.78e-10!22;UBERON:0000924!7.24e-10!173;UBERON:0006601!7.24e-10!173;UBERON:0000062!9.48e-10!511;UBERON:0004921!1.05e-09!129;UBERON:0004185!1.05e-09!129;UBERON:0001007!2.30e-09!155;UBERON:0001555!2.30e-09!155;UBERON:0007026!2.30e-09!155;UBERON:0000481!2.45e-09!347;UBERON:0004119!2.75e-09!169;UBERON:0000925!2.75e-09!169;UBERON:0006595!2.75e-09!169;UBERON:0004111!2.77e-09!241;UBERON:0001950!8.23e-09!20;UBERON:0000477!2.27e-08!286;UBERON:0000033!5.35e-08!123;UBERON:0000153!6.07e-08!129;UBERON:0007811!6.07e-08!129;UBERON:0003056!1.47e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.75e-07;22!UBERON:0000956;5.07e-07;25!UBERON:0000203;5.07e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.61e-11,81;UBERON:0011216,2.47e-10,223;UBERON:0001016,5.72e-09,89;UBERON:0007023,5.73e-09,114;UBERON:0001049,1.44e-08,56;UBERON:0005068,1.44e-08,56;UBERON:0006241,1.44e-08,56;UBERON:0007135,1.44e-08,56;UBERON:0001869,1.44e-07,32;UBERON:0000073,1.84e-07,53;UBERON:0002616,1.84e-07,53;UBERON:0002619,2.38e-07,22;UBERON:0000955,2.73e-07,68;UBERON:0006238,2.73e-07,68;UBERON:0000956,3.63e-07,25;UBERON:0000203,3.63e-07,25;UBERON:0002780,5.30e-07,41;UBERON:0001890,5.30e-07,41;UBERON:0003080,5.30e-07,41;UBERON:0006240,5.30e-07,41;UBERON:0001893,6.80e-07,34 | |||
|phase1_expression=0.363356758541113,0.214100523890983,1.69145284915165,1.0007329835313,0.446961094427288,0,0,0,0.783556884599516,0.491467873003018,0,2.18441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0.85870796139317,1.23186982565596,0.251085279189606,0.458480434487708,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0.542270404062111,0,0.293600439334847,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.657751618414705,0,0.579606171470105,0.296573126324121,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,1.34140171940727,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0.973269740605272,0.0945348171640679,0,0,1.17881167947941,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.357198913136319,0,0.225222960966644,0,0,0,0,0,0,0,0.506522046658319,0.926864265692532,0.573673241497627,0.354668382198357,0.560677600142307,0,0,1.55605517699883,0.134710672069688,1.14423332179421,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0,0,0,0.30648779579902,0,0.567160915800105,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0.323292113637624,0,0,0,2.31913023795956,0.272746120590835,1.14721838155602,0.975789649036763,1.32529768321485,0.813357600086629,0.621966330092223,1.00928340350251,1.45990943630332,0,0,0,0,0,0.946454400318751,0.337169380156203,1.92808823906786,1.10293972732394,1.52515610864684,0.71181185733329,1.8876383142423,1.96221465125346,0.769494313892781,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0.368965315629341,0,0.98775256867763,0,0.201057944823262,0.925884451585296,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0,0.839910640994298,0.425325291727159,1.16426079513703,0.581267877027924,1.15014803749563,0,0,0.414656231081544,0.144119953416961,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0.710783897485092,0,1.20575750823834,0,1.09970290300263,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.179060963239896,0,0.197030760201927,0,0,1.52456774533478,1.30139853857622,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.630809660135739,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0,0,0.303127571446259,0,1.5119514666484,0,0.460385919864187,0,0.896974044789907,0,0.965123526861645,1.48418066444991,0,0,0.246381468041427,0,0,1.69203229428271,0.802025881213139,0.552485933615378,1.26295892981067,0.910455840033585,0.524497659837696,0,0.539107359730903,0,1.46139224653261,0.422206515571503,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0.574265537996172,1.30012049207304,4.82051789532479,0,0,0.15350367472613,0,0.107420244868274,0,0.255679882248303,0.356128142586949,0.991709492165869,0.576570202095319,1.02090169995667,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.429374660225974,0.372158369359667,0,0.571890581771475,0.255897791311334,0.42793898803392,0,0,0.719489830333259,0.823611089208164,0.353437207037059,0.202182481573316,1.58510321173008,0,0,0.487426979262569,0,0.136499911407986,0.565621727814851,1.13008116620243,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.192444225451024,0.670302275535787,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,1.92495971052672,2.45040215981032,1.11481905075431,0,0.0711418433484141,0,0,0,0,0,0,0,0,2.50634477090067,1.18504244461122,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,4.30423242938906,0.439524537815682,0,0.222886768554957,0,2.62618933211459,1.48482340416319,0.921482106297696,0.994147647766298,0.844016498463076,0.111308705022906,0,0.211125408127993,6.37593562403423,1.93398740871803,1.51159648712566,0.20453736500431,0,0,0.718946809178615,0.895105873378046,0,0.295930216910801,0,0,0.969332746095218,1.29875337426592,1.99613798001194,0.520855522170466,1.13697999995054,0.724999575434793,0.455173793141999,1.01701460117107,1.89110145414349,0.689486746482929,0,0.347249989866585,0.885741385813839,1.20596438625408,1.52581736317083,2.43274371848694,1.47773809476774,1.53569778007781,0.762569244632931,3.34616986268648,1.00035336054936,0,0.23056390438806,0.0897576444097721,0.2172947438440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| ||
|short_description=p4@LRRC16A | |||
}} | }} |
Latest revision as of 07:40, 17 September 2015
Short description: | p4@LRRC16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC16A_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_ENST00000377969_5end |
EntrezGene: | LRRC16A |
HGNC: | 21581 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.61e-11 | 81 |
organ system subdivision | 2.47e-10 | 223 |
nervous system | 5.72e-09 | 89 |
adult organism | 5.73e-09 | 114 |
neural tube | 1.44e-08 | 56 |
neural rod | 1.44e-08 | 56 |
future spinal cord | 1.44e-08 | 56 |
neural keel | 1.44e-08 | 56 |
cerebral hemisphere | 1.44e-07 | 32 |
regional part of nervous system | 1.84e-07 | 53 |
regional part of brain | 1.84e-07 | 53 |
regional part of cerebral cortex | 2.38e-07 | 22 |
brain | 2.73e-07 | 68 |
future brain | 2.73e-07 | 68 |
cerebral cortex | 3.63e-07 | 25 |
pallium | 3.63e-07 | 25 |
regional part of forebrain | 5.30e-07 | 41 |
forebrain | 5.30e-07 | 41 |
anterior neural tube | 5.30e-07 | 41 |
future forebrain | 5.30e-07 | 41 |
telencephalon | 6.80e-07 | 34 |