FFCP PHASE1:Hg19::chr6:25279759..25279783,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55604 | |EntrezGene=55604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21581 | |HGNC=21581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-91bp_to_ENST00000377969_5end | |association_with_transcript=-91bp_to_ENST00000377969_5end | ||
|cluster_id=chr6:25279759..25279783,+ | |||
|description=CAGE_peak_4_at_LRRC16A_5end | |description=CAGE_peak_4_at_LRRC16A_5end | ||
|id=chr6:25279759..25279783,+ | |id=chr6:25279759..25279783,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.81e-07;29 | |||
|ontology_enrichment_disease=DOID:305!3.10e-10!106 | |ontology_enrichment_disease=DOID:305!3.10e-10!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-19!115;UBERON:0001017!3.88e-15!82;UBERON:0005743!1.76e-14!86;UBERON:0001049!2.62e-14!57;UBERON:0005068!2.62e-14!57;UBERON:0006241!2.62e-14!57;UBERON:0007135!2.62e-14!57;UBERON:0000064!8.23e-13!219;UBERON:0003080!1.16e-12!42;UBERON:0002780!1.80e-12!41;UBERON:0001890!1.80e-12!41;UBERON:0006240!1.80e-12!41;UBERON:0001869!2.84e-12!32;UBERON:0001893!6.67e-12!34;UBERON:0002020!7.53e-12!34;UBERON:0003528!7.53e-12!34;UBERON:0002791!2.02e-11!33;UBERON:0002616!2.63e-11!59;UBERON:0000073!2.72e-11!94;UBERON:0001016!2.72e-11!94;UBERON:0000955!7.77e-11!69;UBERON:0006238!7.77e-11!69;UBERON:0003075!1.40e-10!86;UBERON:0007284!1.40e-10!86;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0004121!3.54e-10!169;UBERON:0002346!5.15e-10!90;UBERON:0002619!6.78e-10!22;UBERON:0000924!7.24e-10!173;UBERON:0006601!7.24e-10!173;UBERON:0000062!9.48e-10!511;UBERON:0004921!1.05e-09!129;UBERON:0004185!1.05e-09!129;UBERON:0001007!2.30e-09!155;UBERON:0001555!2.30e-09!155;UBERON:0007026!2.30e-09!155;UBERON:0000481!2.45e-09!347;UBERON:0004119!2.75e-09!169;UBERON:0000925!2.75e-09!169;UBERON:0006595!2.75e-09!169;UBERON:0004111!2.77e-09!241;UBERON:0001950!8.23e-09!20;UBERON:0000477!2.27e-08!286;UBERON:0000033!5.35e-08!123;UBERON:0000153!6.07e-08!129;UBERON:0007811!6.07e-08!129;UBERON:0003056!1.47e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.29e-19!115;UBERON:0001017!3.88e-15!82;UBERON:0005743!1.76e-14!86;UBERON:0001049!2.62e-14!57;UBERON:0005068!2.62e-14!57;UBERON:0006241!2.62e-14!57;UBERON:0007135!2.62e-14!57;UBERON:0000064!8.23e-13!219;UBERON:0003080!1.16e-12!42;UBERON:0002780!1.80e-12!41;UBERON:0001890!1.80e-12!41;UBERON:0006240!1.80e-12!41;UBERON:0001869!2.84e-12!32;UBERON:0001893!6.67e-12!34;UBERON:0002020!7.53e-12!34;UBERON:0003528!7.53e-12!34;UBERON:0002791!2.02e-11!33;UBERON:0002616!2.63e-11!59;UBERON:0000073!2.72e-11!94;UBERON:0001016!2.72e-11!94;UBERON:0000955!7.77e-11!69;UBERON:0006238!7.77e-11!69;UBERON:0003075!1.40e-10!86;UBERON:0007284!1.40e-10!86;UBERON:0000956!2.57e-10!25;UBERON:0000203!2.57e-10!25;UBERON:0004121!3.54e-10!169;UBERON:0002346!5.15e-10!90;UBERON:0002619!6.78e-10!22;UBERON:0000924!7.24e-10!173;UBERON:0006601!7.24e-10!173;UBERON:0000062!9.48e-10!511;UBERON:0004921!1.05e-09!129;UBERON:0004185!1.05e-09!129;UBERON:0001007!2.30e-09!155;UBERON:0001555!2.30e-09!155;UBERON:0007026!2.30e-09!155;UBERON:0000481!2.45e-09!347;UBERON:0004119!2.75e-09!169;UBERON:0000925!2.75e-09!169;UBERON:0006595!2.75e-09!169;UBERON:0004111!2.77e-09!241;UBERON:0001950!8.23e-09!20;UBERON:0000477!2.27e-08!286;UBERON:0000033!5.35e-08!123;UBERON:0000153!6.07e-08!129;UBERON:0007811!6.07e-08!129;UBERON:0003056!1.47e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.75e-07;22!UBERON:0000956;5.07e-07;25!UBERON:0000203;5.07e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.61e-11,81;UBERON:0011216,2.47e-10,223;UBERON:0001016,5.72e-09,89;UBERON:0007023,5.73e-09,114;UBERON:0001049,1.44e-08,56;UBERON:0005068,1.44e-08,56;UBERON:0006241,1.44e-08,56;UBERON:0007135,1.44e-08,56;UBERON:0001869,1.44e-07,32;UBERON:0000073,1.84e-07,53;UBERON:0002616,1.84e-07,53;UBERON:0002619,2.38e-07,22;UBERON:0000955,2.73e-07,68;UBERON:0006238,2.73e-07,68;UBERON:0000956,3.63e-07,25;UBERON:0000203,3.63e-07,25;UBERON:0002780,5.30e-07,41;UBERON:0001890,5.30e-07,41;UBERON:0003080,5.30e-07,41;UBERON:0006240,5.30e-07,41;UBERON:0001893,6.80e-07,34 | |||
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| ||
|short_description=p4@LRRC16A | |short_description=p4@LRRC16A | ||
}} | }} |
Latest revision as of 07:40, 17 September 2015
Short description: | p4@LRRC16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC16A_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_ENST00000377969_5end |
EntrezGene: | LRRC16A |
HGNC: | 21581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.61e-11 | 81 |
organ system subdivision | 2.47e-10 | 223 |
nervous system | 5.72e-09 | 89 |
adult organism | 5.73e-09 | 114 |
neural tube | 1.44e-08 | 56 |
neural rod | 1.44e-08 | 56 |
future spinal cord | 1.44e-08 | 56 |
neural keel | 1.44e-08 | 56 |
cerebral hemisphere | 1.44e-07 | 32 |
regional part of nervous system | 1.84e-07 | 53 |
regional part of brain | 1.84e-07 | 53 |
regional part of cerebral cortex | 2.38e-07 | 22 |
brain | 2.73e-07 | 68 |
future brain | 2.73e-07 | 68 |
cerebral cortex | 3.63e-07 | 25 |
pallium | 3.63e-07 | 25 |
regional part of forebrain | 5.30e-07 | 41 |
forebrain | 5.30e-07 | 41 |
anterior neural tube | 5.30e-07 | 41 |
future forebrain | 5.30e-07 | 41 |
telencephalon | 6.80e-07 | 34 |