FFCP PHASE1:Hg19::chr20:57875548..57875554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1908 | |EntrezGene=1908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |HGNC=3178 | ||
|TSSclassifier=strong | |||
|UniProt=P14138,Q7Z6D2,Q4FAT2 | |UniProt=P14138,Q7Z6D2,Q4FAT2 | ||
|association_with_transcript=49bp_to_ENST00000371028,NM_000114,NM_207032,NM_207033,NM_207034,uc002yao.1,uc002yap.2,uc002yaq.2,uc002yar.2,uc002yas.2_5end | |association_with_transcript=49bp_to_ENST00000371028,NM_000114,NM_207032,NM_207033,NM_207034,uc002yao.1,uc002yap.2,uc002yaq.2,uc002yar.2,uc002yas.2_5end | ||
|cluster_id=chr20:57875548..57875554,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_9_at_EDN3_5end | |description=CAGE_peak_9_at_EDN3_5end | ||
|id=chr20:57875548..57875554,+ | |id=chr20:57875548..57875554,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.40e-13!115;UBERON:0005705!1.08e-10!1;UBERON:0008193!1.08e-10!1;UBERON:0002514!1.08e-10!1;UBERON:0003462!1.08e-10!1;UBERON:0008001!1.08e-10!1;UBERON:0007914!1.08e-10!1;UBERON:0003457!1.08e-10!1;UBERON:0009292!1.08e-10!1;UBERON:0007375!1.08e-10!1;UBERON:0003323!1.08e-10!1;UBERON:0002397!1.08e-10!1;UBERON:0001709!1.08e-10!1;UBERON:0004066!1.08e-10!1;UBERON:0002244!1.08e-10!1;UBERON:0005620!1.08e-10!1;UBERON:0004068!1.08e-10!1;UBERON:0004362!1.08e-10!1;UBERON:0001301!2.08e-10!1;UBERON:0007190!3.29e-10!1;UBERON:0002336!3.61e-10!1;UBERON:0001018!3.61e-10!1;UBERON:0002473!3.61e-10!1;UBERON:0005340!3.61e-10!1;UBERON:0002316!3.61e-10!1;UBERON:0003544!3.61e-10!1;UBERON:0001020!3.61e-10!1;UBERON:0005970!3.61e-10!1;UBERON:0002437!3.61e-10!1;UBERON:0002022!4.75e-10!1;UBERON:0001049!7.25e-09!57;UBERON:0005068!7.25e-09!57;UBERON:0006241!7.25e-09!57;UBERON:0007135!7.25e-09!57;UBERON:0001893!9.45e-09!34;UBERON:0002780!3.23e-07!41;UBERON:0001890!3.23e-07!41;UBERON:0006240!3.23e-07!41;UBERON:0003075!4.10e-07!86;UBERON:0007284!4.10e-07!86;UBERON:0003080!4.87e-07!42;UBERON:0001950!4.93e-07!20;UBERON:0005743!5.10e-07!86;UBERON:0002346!9.55e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.71e-14;5!UBERON:0005388;1.71e-14;5!UBERON:0001802;1.71e-14;5!UBERON:0001871;9.43e-11;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0001871,9.89e-11,6 | |||
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|short_description=p9@EDN3 | |short_description=p9@EDN3 | ||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p9@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EDN3_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 49bp_to_ENST00000371028, NM_000114, NM_207032, NM_207033, NM_207034, uc002yao.1, uc002yap.2, uc002yaq.2, uc002yar.2, uc002yas.2_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | P14138Q7Z6D2Q4FAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
temporal lobe | 9.89e-11 | 6 |