FFCP PHASE1:Hg19::chr6:25279289..25279415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55604 | |EntrezGene=55604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21581 | |HGNC=21581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461945_5end | |association_with_transcript=0bp_to_ENST00000461945_5end | ||
|cluster_id=chr6:25279289..25279415,+ | |||
|coexpression_cluster_id=C1379 | |||
|description=CAGE_peak_3_at_LRRC16A_5end | |description=CAGE_peak_3_at_LRRC16A_5end | ||
|id=chr6:25279289..25279415,+ | |id=chr6:25279289..25279415,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.34e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.66e-31!82;UBERON:0001049!5.18e-30!57;UBERON:0005068!5.18e-30!57;UBERON:0006241!5.18e-30!57;UBERON:0007135!5.18e-30!57;UBERON:0005743!6.60e-30!86;UBERON:0000073!2.13e-27!94;UBERON:0001016!2.13e-27!94;UBERON:0003075!1.03e-25!86;UBERON:0007284!1.03e-25!86;UBERON:0002346!1.71e-25!90;UBERON:0003080!5.28e-25!42;UBERON:0000955!8.12e-25!69;UBERON:0006238!8.12e-25!69;UBERON:0002780!1.27e-24!41;UBERON:0001890!1.27e-24!41;UBERON:0006240!1.27e-24!41;UBERON:0007023!3.13e-24!115;UBERON:0002616!3.65e-24!59;UBERON:0002020!1.26e-21!34;UBERON:0003528!1.26e-21!34;UBERON:0001893!1.65e-21!34;UBERON:0002791!6.39e-21!33;UBERON:0001869!1.01e-20!32;UBERON:0003056!5.21e-18!61;UBERON:0000956!9.34e-17!25;UBERON:0000203!9.34e-17!25;UBERON:0000924!1.66e-15!173;UBERON:0006601!1.66e-15!173;UBERON:0004121!2.52e-15!169;UBERON:0002619!3.80e-15!22;UBERON:0000153!7.30e-15!129;UBERON:0007811!7.30e-15!129;UBERON:0000033!4.96e-14!123;UBERON:0001950!5.99e-14!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.08e-23;32!UBERON:0003528;3.37e-23;34!UBERON:0002020;3.37e-23;34!UBERON:0002791;3.93e-23;32!UBERON:0001893;4.90e-23;34!UBERON:0002780;2.17e-22;41!UBERON:0001890;2.17e-22;41!UBERON:0000956;9.58e-21;25!UBERON:0000203;9.58e-21;25!UBERON:0000073;9.66e-20;53!UBERON:0002616;9.66e-20;53!UBERON:0002619;1.17e-18;22!UBERON:0001950;3.90e-17;20!UBERON:0001017;2.36e-15;75!UBERON:0000955;3.02e-15;68!UBERON:0001016;3.46e-13;83!UBERON:0007023;1.49e-09;114!UBERON:0002420;1.29e-07;9!UBERON:0007245;1.29e-07;9!UBERON:0010009;1.29e-07;9!UBERON:0010011;1.29e-07;9!UBERON:0000454;1.29e-07;9!UBERON:0000125;1.36e-07;9!UBERON:0002308;1.36e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.63e-39,81;UBERON:0001049,3.85e-36,56;UBERON:0005068,3.85e-36,56;UBERON:0006241,3.85e-36,56;UBERON:0007135,3.85e-36,56;UBERON:0001016,7.84e-35,89;UBERON:0000073,1.04e-33,53;UBERON:0002616,1.04e-33,53;UBERON:0000955,1.31e-30,68;UBERON:0006238,1.31e-30,68;UBERON:0002780,1.93e-30,41;UBERON:0001890,1.93e-30,41;UBERON:0003080,1.93e-30,41;UBERON:0006240,1.93e-30,41;UBERON:0007023,8.01e-30,114;UBERON:0003075,1.09e-29,82;UBERON:0007284,1.09e-29,82;UBERON:0002346,4.13e-29,86;UBERON:0003528,1.11e-26,34;UBERON:0002020,1.11e-26,34;UBERON:0001893,1.55e-26,34;UBERON:0001869,1.51e-25,32;UBERON:0002791,3.87e-25,32;UBERON:0010314,3.92e-23,132;UBERON:0010371,3.85e-22,104;UBERON:0003056,4.05e-22,61;UBERON:0000956,1.41e-20,25;UBERON:0000203,1.41e-20,25;UBERON:0004121,1.43e-20,171;UBERON:0000924,1.43e-20,171;UBERON:0006601,1.43e-20,171;UBERON:0002619,1.46e-18,22;UBERON:0001950,4.62e-17,20;UBERON:0011216,1.57e-14,223;UBERON:0000025,1.79e-08,192;UBERON:0002420,1.46e-07,9;UBERON:0007245,1.46e-07,9;UBERON:0010009,1.46e-07,9;UBERON:0010011,1.46e-07,9;UBERON:0000454,1.46e-07,9;UBERON:0000125,1.56e-07,9;UBERON:0002308,1.56e-07,9;UBERON:0004111,2.84e-07,240;UBERON:0003076,3.21e-07,15;UBERON:0003057,3.21e-07,15 | |||
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| ||
|short_description=p3@LRRC16A | |short_description=p3@LRRC16A | ||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p3@LRRC16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC16A_5end |
Coexpression cluster: | C1379_pineal_cerebellum_small_occipital_parietal_temporal_hippocampus |
Association with transcript: | 0bp_to_ENST00000461945_5end |
EntrezGene: | LRRC16A |
HGNC: | 21581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data