FFCP PHASE1:Hg19::chr9:35547554..35547568,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23625 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |||
|association_with_transcript=392bp_to_BC064843_5end | |||
|cluster_id=chr9:35547554..35547568,+ | |||
|description=CAGE_peak_10_at_RUSC2_5end | |||
|id=chr9:35547554..35547568,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-12!57;UBERON:0005068!2.65e-12!57;UBERON:0006241!2.65e-12!57;UBERON:0007135!2.65e-12!57;UBERON:0002616!4.19e-11!59;UBERON:0003080!6.62e-10!42;UBERON:0000468!1.29e-09!659;UBERON:0002780!1.92e-09!41;UBERON:0001890!1.92e-09!41;UBERON:0006240!1.92e-09!41;UBERON:0001017!7.24e-09!82;UBERON:0002020!8.20e-09!34;UBERON:0003528!8.20e-09!34;UBERON:0005743!1.19e-08!86;UBERON:0001950!1.47e-08!20;UBERON:0000955!1.56e-08!69;UBERON:0006238!1.56e-08!69;UBERON:0001893!2.12e-08!34;UBERON:0002619!2.97e-08!22;UBERON:0002791!3.06e-08!33;UBERON:0000956!4.01e-08!25;UBERON:0000203!4.01e-08!25;UBERON:0003075!4.55e-08!86;UBERON:0007284!4.55e-08!86;UBERON:0001869!6.69e-08!32;UBERON:0000467!9.68e-08!625;UBERON:0002346!1.13e-07!90;UBERON:0000480!1.40e-07!626;UBERON:0000119!2.24e-07!312;UBERON:0000483!2.98e-07!309;UBERON:0000475!7.13e-07!365;UBERON:0000073!8.37e-07!94;UBERON:0001016!8.37e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.39e-12;22!UBERON:0001950;1.27e-11;20!UBERON:0002791;1.39e-10;32!UBERON:0000956;3.59e-10;25!UBERON:0000203;3.59e-10;25!UBERON:0003528;3.22e-09;34!UBERON:0002020;3.22e-09;34!UBERON:0001869;3.47e-09;32!UBERON:0001893;7.26e-09;34!UBERON:0000073;1.03e-07;53!UBERON:0002616;1.03e-07;53!UBERON:0002780;2.54e-07;41!UBERON:0001890;2.54e-07;41!UBERON:0003688;6.09e-07;6!UBERON:0002358;6.09e-07;6!UBERON:0003684;6.09e-07;6!UBERON:0001178;6.09e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.10e-12,22;UBERON:0001049,5.89e-12,56;UBERON:0005068,5.89e-12,56;UBERON:0006241,5.89e-12,56;UBERON:0007135,5.89e-12,56;UBERON:0000073,7.30e-12,53;UBERON:0002616,7.30e-12,53;UBERON:0001950,1.16e-11,20;UBERON:0003528,1.45e-11,34;UBERON:0002020,1.45e-11,34;UBERON:0002791,3.50e-11,32;UBERON:0001893,2.82e-10,34;UBERON:0000956,2.83e-10,25;UBERON:0000203,2.83e-10,25;UBERON:0002780,3.86e-10,41;UBERON:0001890,3.86e-10,41;UBERON:0003080,3.86e-10,41;UBERON:0006240,3.86e-10,41;UBERON:0001869,1.07e-09,32;UBERON:0000955,1.31e-08,68;UBERON:0006238,1.31e-08,68;UBERON:0001017,1.21e-07,81;UBERON:0003075,1.48e-07,82;UBERON:0007284,1.48e-07,82;UBERON:0002346,6.59e-07,86 | |||
|phase1_expression=0.363356758541113,1.71280419112787,1.9733616573436,1.0007329835313,1.34088328328186,1.74467704820074,0,0,0.261185628199839,0.982935746006035,2.79120467188971,0.218441372130172,0,0.37129905888014,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0.286235987131057,0.821246550437305,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0,0,1.00272223735071,0,0,0,0.257575567634187,0.726991193897824,0.377875943688809,0.727752183563449,0.697287110717054,1.6446715520873,0.619412741790207,0.28769239232215,0.768482119587302,0,0.344745680736619,0,0,1.12945403725563,1.91034305040492,0.224723484445085,0.306083892370903,0,1.27867425159808,0.659702600373432,0.398927315243264,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,1.0429658368404,0,0.605399502633369,0.368277635987565,0.632924774881769,0,0.425208599930087,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0.361439152384566,1.50401373190767,0.579386075843295,0,0.486634870302636,0.283604451492204,0.886917589850256,0.43917392846563,0.72038491523742,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0.56530794192401,0,1.6507082516404,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.732806975721629,0,0,0.436094052142534,0.993943903390637,0.759783069987479,0.397227542439656,1.43418310374407,0.709336764396714,0.560677600142307,0,0.74000264525148,0.311211035399766,0.134710672069688,0.980771418680752,0.302714855289863,0,0,0,0,0.896692083310806,0.352303495931295,0.485618833104395,0.140450806702248,0,0.368502951935304,0.413303124703062,0,0.989067717114227,0,0,0.168336113954066,0.750711119231785,0,1.31693286264251,0.612975591598039,0.751190294532984,0.113432183160021,1.07633781413317,0,0.847727604638247,0.300091096084402,0.515262646192195,1.03056216018252,1.11670113798954,0.506328996723799,0.389748020644795,0.504867548488229,0.368199594569197,0,1.77504796258307,0.604512589365842,0,0,0,0.286804595389004,0.121973706129595,0.265059536642971,0,0.310983165046111,0,0.36497735907583,3.12899064659632,1.92972281457866,0,0.928735856063958,0,0.354920400119532,0.842923450390509,1.44606617930089,0.330881918197182,1.30727666455444,0.237270619111097,0.404493924480493,0.588664395376038,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0.277765335475589,0,0,1.44331342025273,0,0.117408694235822,0.288732895522148,0,0.380508304469197,0,0,0,0.468008530278475,0.743155811443641,0,0,0,0.268675568108545,0,0.383382679165211,0.492663237895943,0.616339038092582,0.829312462163088,0.576479813667846,0.50496973370552,0.063497894292169,0.763976851116555,0,0,0.205654985406647,0,0,0,1.30788020649984,0.36669142910475,0.129271715757778,0,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.799783929456456,0,0,2.10833939483032,0,2.29723871668228,0,0.579125226670317,1.64381058040307,0.537182889719687,0,0,0,0,0.76228387266739,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.831883446123229,5.17444067511769,1.73472656537328,0.702848489956279,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.434418072340414,0,0.343143423810856,0,0,0.106727557803444,0,1.66435439510497,0.30239029332968,1.48864684691266,0.767309866440312,3.08726103876381,0.896974044789907,1.02341449813341,3.21707842287215,4.45254199334973,0.616838775210622,0.532685175939381,0.0821271560138091,1.55776328755086,0.581051892299796,0.120859449591622,1.60405176242628,0.368323955743585,0.68888668898764,1.27463817604702,1.04899531967539,0,0.616122696835318,0,0,0.211103257785751,0,0.850468526382578,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0.457847324091717,0,1.14853107599234,0.650060246036521,1.6068392984416,0.290012154876366,0,0.15350367472613,0.964856007391714,0.214840489736547,0.580066775656914,0.426133137080504,0.267096106940212,0,0.768760269460425,0.255225424989168,0.10115778085555,3.71876439437829,0.94443704049192,2.0911118104818,0.308033580176089,0,0,1.29726953372744,0.286249773483982,0,0.949138274156178,0.762520775695299,0,0.855877976067841,0,2.35484592059769,0.539617372749944,1.92175920815238,0.353437207037059,0,1.58510321173008,0,0.975267478179181,0.731140468893853,3.16950440270266,0.682499557039929,1.27264888758341,1.13008116620243,1.10273068709225,0.66343897524122,0.438450885253763,1.15755106853338,0.655894752046633,0.202910376962704,0.30982349809975,1.40847801266121,0.286822704408103,0.294747123039363,0,0,0.422215270595328,0.987884678879706,0,0.349934720244983,0.192444225451024,1.34060455107157,0,0.3765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| |||
|short_description=p10@RUSC2 | |||
}} |
Latest revision as of 07:36, 17 September 2015
Short description: | p10@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 392bp_to_BC064843_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.10e-12 | 22 |
neural tube | 5.89e-12 | 56 |
neural rod | 5.89e-12 | 56 |
future spinal cord | 5.89e-12 | 56 |
neural keel | 5.89e-12 | 56 |
regional part of nervous system | 7.30e-12 | 53 |
regional part of brain | 7.30e-12 | 53 |
neocortex | 1.16e-11 | 20 |
brain grey matter | 1.45e-11 | 34 |
gray matter | 1.45e-11 | 34 |
regional part of telencephalon | 3.50e-11 | 32 |
telencephalon | 2.82e-10 | 34 |
cerebral cortex | 2.83e-10 | 25 |
pallium | 2.83e-10 | 25 |
regional part of forebrain | 3.86e-10 | 41 |
forebrain | 3.86e-10 | 41 |
anterior neural tube | 3.86e-10 | 41 |
future forebrain | 3.86e-10 | 41 |
cerebral hemisphere | 1.07e-09 | 32 |
brain | 1.31e-08 | 68 |
future brain | 1.31e-08 | 68 |
central nervous system | 1.21e-07 | 81 |
neural plate | 1.48e-07 | 82 |
presumptive neural plate | 1.48e-07 | 82 |
neurectoderm | 6.59e-07 | 86 |