FFCP PHASE1:Hg19::chr9:35547554..35547568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |EntrezGene=9853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23625 | |HGNC=23625 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |UniProt=Q8N2Y8 | ||
|association_with_transcript=392bp_to_BC064843_5end | |association_with_transcript=392bp_to_BC064843_5end | ||
|cluster_id=chr9:35547554..35547568,+ | |||
|description=CAGE_peak_10_at_RUSC2_5end | |description=CAGE_peak_10_at_RUSC2_5end | ||
|id=chr9:35547554..35547568,+ | |id=chr9:35547554..35547568,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-12!57;UBERON:0005068!2.65e-12!57;UBERON:0006241!2.65e-12!57;UBERON:0007135!2.65e-12!57;UBERON:0002616!4.19e-11!59;UBERON:0003080!6.62e-10!42;UBERON:0000468!1.29e-09!659;UBERON:0002780!1.92e-09!41;UBERON:0001890!1.92e-09!41;UBERON:0006240!1.92e-09!41;UBERON:0001017!7.24e-09!82;UBERON:0002020!8.20e-09!34;UBERON:0003528!8.20e-09!34;UBERON:0005743!1.19e-08!86;UBERON:0001950!1.47e-08!20;UBERON:0000955!1.56e-08!69;UBERON:0006238!1.56e-08!69;UBERON:0001893!2.12e-08!34;UBERON:0002619!2.97e-08!22;UBERON:0002791!3.06e-08!33;UBERON:0000956!4.01e-08!25;UBERON:0000203!4.01e-08!25;UBERON:0003075!4.55e-08!86;UBERON:0007284!4.55e-08!86;UBERON:0001869!6.69e-08!32;UBERON:0000467!9.68e-08!625;UBERON:0002346!1.13e-07!90;UBERON:0000480!1.40e-07!626;UBERON:0000119!2.24e-07!312;UBERON:0000483!2.98e-07!309;UBERON:0000475!7.13e-07!365;UBERON:0000073!8.37e-07!94;UBERON:0001016!8.37e-07!94 | |ontology_enrichment_uberon=UBERON:0001049!2.65e-12!57;UBERON:0005068!2.65e-12!57;UBERON:0006241!2.65e-12!57;UBERON:0007135!2.65e-12!57;UBERON:0002616!4.19e-11!59;UBERON:0003080!6.62e-10!42;UBERON:0000468!1.29e-09!659;UBERON:0002780!1.92e-09!41;UBERON:0001890!1.92e-09!41;UBERON:0006240!1.92e-09!41;UBERON:0001017!7.24e-09!82;UBERON:0002020!8.20e-09!34;UBERON:0003528!8.20e-09!34;UBERON:0005743!1.19e-08!86;UBERON:0001950!1.47e-08!20;UBERON:0000955!1.56e-08!69;UBERON:0006238!1.56e-08!69;UBERON:0001893!2.12e-08!34;UBERON:0002619!2.97e-08!22;UBERON:0002791!3.06e-08!33;UBERON:0000956!4.01e-08!25;UBERON:0000203!4.01e-08!25;UBERON:0003075!4.55e-08!86;UBERON:0007284!4.55e-08!86;UBERON:0001869!6.69e-08!32;UBERON:0000467!9.68e-08!625;UBERON:0002346!1.13e-07!90;UBERON:0000480!1.40e-07!626;UBERON:0000119!2.24e-07!312;UBERON:0000483!2.98e-07!309;UBERON:0000475!7.13e-07!365;UBERON:0000073!8.37e-07!94;UBERON:0001016!8.37e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.39e-12;22!UBERON:0001950;1.27e-11;20!UBERON:0002791;1.39e-10;32!UBERON:0000956;3.59e-10;25!UBERON:0000203;3.59e-10;25!UBERON:0003528;3.22e-09;34!UBERON:0002020;3.22e-09;34!UBERON:0001869;3.47e-09;32!UBERON:0001893;7.26e-09;34!UBERON:0000073;1.03e-07;53!UBERON:0002616;1.03e-07;53!UBERON:0002780;2.54e-07;41!UBERON:0001890;2.54e-07;41!UBERON:0003688;6.09e-07;6!UBERON:0002358;6.09e-07;6!UBERON:0003684;6.09e-07;6!UBERON:0001178;6.09e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.10e-12,22;UBERON:0001049,5.89e-12,56;UBERON:0005068,5.89e-12,56;UBERON:0006241,5.89e-12,56;UBERON:0007135,5.89e-12,56;UBERON:0000073,7.30e-12,53;UBERON:0002616,7.30e-12,53;UBERON:0001950,1.16e-11,20;UBERON:0003528,1.45e-11,34;UBERON:0002020,1.45e-11,34;UBERON:0002791,3.50e-11,32;UBERON:0001893,2.82e-10,34;UBERON:0000956,2.83e-10,25;UBERON:0000203,2.83e-10,25;UBERON:0002780,3.86e-10,41;UBERON:0001890,3.86e-10,41;UBERON:0003080,3.86e-10,41;UBERON:0006240,3.86e-10,41;UBERON:0001869,1.07e-09,32;UBERON:0000955,1.31e-08,68;UBERON:0006238,1.31e-08,68;UBERON:0001017,1.21e-07,81;UBERON:0003075,1.48e-07,82;UBERON:0007284,1.48e-07,82;UBERON:0002346,6.59e-07,86 | |||
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| ||
|short_description=p10@RUSC2 | |short_description=p10@RUSC2 | ||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p10@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 392bp_to_BC064843_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.10e-12 | 22 |
neural tube | 5.89e-12 | 56 |
neural rod | 5.89e-12 | 56 |
future spinal cord | 5.89e-12 | 56 |
neural keel | 5.89e-12 | 56 |
regional part of nervous system | 7.30e-12 | 53 |
regional part of brain | 7.30e-12 | 53 |
neocortex | 1.16e-11 | 20 |
brain grey matter | 1.45e-11 | 34 |
gray matter | 1.45e-11 | 34 |
regional part of telencephalon | 3.50e-11 | 32 |
telencephalon | 2.82e-10 | 34 |
cerebral cortex | 2.83e-10 | 25 |
pallium | 2.83e-10 | 25 |
regional part of forebrain | 3.86e-10 | 41 |
forebrain | 3.86e-10 | 41 |
anterior neural tube | 3.86e-10 | 41 |
future forebrain | 3.86e-10 | 41 |
cerebral hemisphere | 1.07e-09 | 32 |
brain | 1.31e-08 | 68 |
future brain | 1.31e-08 | 68 |
central nervous system | 1.21e-07 | 81 |
neural plate | 1.48e-07 | 82 |
presumptive neural plate | 1.48e-07 | 82 |
neurectoderm | 6.59e-07 | 86 |