FFCP PHASE1:Hg19::chr9:35538676..35538695,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |EntrezGene=9853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23625 | |HGNC=23625 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |UniProt=Q8N2Y8 | ||
|association_with_transcript=47bp_to_ENST00000455600,NM_001135999,uc003zwx.3_5end | |association_with_transcript=47bp_to_ENST00000455600,NM_001135999,uc003zwx.3_5end | ||
|cluster_id=chr9:35538676..35538695,+ | |||
|description=CAGE_peak_13_at_RUSC2_5end | |description=CAGE_peak_13_at_RUSC2_5end | ||
|id=chr9:35538676..35538695,+ | |id=chr9:35538676..35538695,+ | ||
|ontology_enrichment_celltype=CL:0000222!6.52e-22!119;CL:0000213!2.85e-19!57;CL:0000215!2.85e-19!57;CL:0002139!8.79e-15!24;CL:0000115!9.03e-13!35;CL:0002078!2.51e-12!44;CL:0000071!9.49e-12!18;CL:0002546!9.49e-12!18;CL:0000220!5.04e-09!246;CL:0000077!5.68e-09!19;CL:0002321!1.01e-08!248;CL:0000076!1.27e-07!62;CL:1000413!5.44e-07!9;CL:0000359!6.87e-07!32 | |ontology_enrichment_celltype=CL:0000222!6.52e-22!119;CL:0000213!2.85e-19!57;CL:0000215!2.85e-19!57;CL:0002139!8.79e-15!24;CL:0000115!9.03e-13!35;CL:0002078!2.51e-12!44;CL:0000071!9.49e-12!18;CL:0002546!9.49e-12!18;CL:0000220!5.04e-09!246;CL:0000077!5.68e-09!19;CL:0002321!1.01e-08!248;CL:0000076!1.27e-07!62;CL:1000413!5.44e-07!9;CL:0000359!6.87e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000071;6.68e-26;18!CL:0002139;1.51e-21;24!CL:0000115;7.22e-17;36!CL:1000413;4.62e-16;9!CL:0002078;2.19e-14;45!CL:0000213;6.32e-14;58!CL:0000215;6.32e-14;58!CL:0002544;8.90e-13;6!CL:0002579;3.06e-10;3!CL:0002144;1.12e-09;3!CL:0000076;8.70e-09;63!CL:0002334;1.34e-08;12!CL:0000077;3.05e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,8.48e-26,18;CL:0002546,8.48e-26,18;CL:0000213,2.37e-25,58;CL:0000215,2.37e-25,58;CL:0002139,2.57e-21,24;CL:0000115,3.29e-20,36;CL:0002078,2.25e-19,45;CL:0000076,8.27e-17,63;CL:1000413,4.93e-16,9;CL:0000222,4.06e-15,121;CL:0002544,1.10e-12,6;CL:0002579,3.44e-10,3;CL:0002144,1.31e-09,3;CL:0002334,1.38e-08,12;CL:0000077,3.21e-08,19;CL:0002321,8.42e-08,250 | |||
|ontology_enrichment_development_v019=CL:0002546;6.68e-26;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.96e-22!69;UBERON:0004872!2.31e-20!84;UBERON:0004111!3.63e-20!241;UBERON:0001981!4.19e-20!60;UBERON:0007500!4.19e-20!60;UBERON:0004537!4.19e-20!60;UBERON:0006965!4.19e-20!60;UBERON:0002049!2.11e-19!79;UBERON:0007798!2.11e-19!79;UBERON:0000025!2.99e-18!194;UBERON:0000477!1.84e-16!286;UBERON:0004535!1.89e-14!110;UBERON:0001009!4.05e-14!113;UBERON:0003914!9.33e-14!118;UBERON:0001637!3.90e-13!42;UBERON:0003509!3.90e-13!42;UBERON:0004572!3.90e-13!42;UBERON:0001869!1.67e-12!32;UBERON:0000119!4.52e-12!312;UBERON:0000483!5.62e-12!309;UBERON:0001893!6.05e-12!34;UBERON:0001986!9.49e-12!18;UBERON:0004638!9.49e-12!18;UBERON:0004852!9.49e-12!18;UBERON:0002619!1.41e-11!22;UBERON:0002791!1.42e-11!33;UBERON:0002020!1.72e-11!34;UBERON:0003528!1.72e-11!34;UBERON:0000487!7.33e-11!22;UBERON:0001950!3.16e-10!20;UBERON:0000956!4.13e-10!25;UBERON:0000203!4.13e-10!25;UBERON:0004573!7.85e-10!33;UBERON:0004571!7.85e-10!33;UBERON:0002780!9.26e-10!41;UBERON:0001890!9.26e-10!41;UBERON:0006240!9.26e-10!41;UBERON:0006914!1.61e-09!25;UBERON:0003080!2.72e-09!42;UBERON:0000475!8.96e-08!365;UBERON:0000467!1.09e-07!625;UBERON:0000468!1.24e-07!659;UBERON:0000480!1.39e-07!626;UBERON:0000947!5.11e-07!21;UBERON:0010191!5.11e-07!21;UBERON:0003915!5.44e-07!9;UBERON:0004700!5.44e-07!9;UBERON:0001917!5.44e-07!9;UBERON:0007023!6.76e-07!115;UBERON:0001049!7.35e-07!57;UBERON:0005068!7.35e-07!57;UBERON:0006241!7.35e-07!57;UBERON:0007135!7.35e-07!57;UBERON:0000490!1.00e-06!138 | |ontology_enrichment_uberon=UBERON:0000055!1.96e-22!69;UBERON:0004872!2.31e-20!84;UBERON:0004111!3.63e-20!241;UBERON:0001981!4.19e-20!60;UBERON:0007500!4.19e-20!60;UBERON:0004537!4.19e-20!60;UBERON:0006965!4.19e-20!60;UBERON:0002049!2.11e-19!79;UBERON:0007798!2.11e-19!79;UBERON:0000025!2.99e-18!194;UBERON:0000477!1.84e-16!286;UBERON:0004535!1.89e-14!110;UBERON:0001009!4.05e-14!113;UBERON:0003914!9.33e-14!118;UBERON:0001637!3.90e-13!42;UBERON:0003509!3.90e-13!42;UBERON:0004572!3.90e-13!42;UBERON:0001869!1.67e-12!32;UBERON:0000119!4.52e-12!312;UBERON:0000483!5.62e-12!309;UBERON:0001893!6.05e-12!34;UBERON:0001986!9.49e-12!18;UBERON:0004638!9.49e-12!18;UBERON:0004852!9.49e-12!18;UBERON:0002619!1.41e-11!22;UBERON:0002791!1.42e-11!33;UBERON:0002020!1.72e-11!34;UBERON:0003528!1.72e-11!34;UBERON:0000487!7.33e-11!22;UBERON:0001950!3.16e-10!20;UBERON:0000956!4.13e-10!25;UBERON:0000203!4.13e-10!25;UBERON:0004573!7.85e-10!33;UBERON:0004571!7.85e-10!33;UBERON:0002780!9.26e-10!41;UBERON:0001890!9.26e-10!41;UBERON:0006240!9.26e-10!41;UBERON:0006914!1.61e-09!25;UBERON:0003080!2.72e-09!42;UBERON:0000475!8.96e-08!365;UBERON:0000467!1.09e-07!625;UBERON:0000468!1.24e-07!659;UBERON:0000480!1.39e-07!626;UBERON:0000947!5.11e-07!21;UBERON:0010191!5.11e-07!21;UBERON:0003915!5.44e-07!9;UBERON:0004700!5.44e-07!9;UBERON:0001917!5.44e-07!9;UBERON:0007023!6.76e-07!115;UBERON:0001049!7.35e-07!57;UBERON:0005068!7.35e-07!57;UBERON:0006241!7.35e-07!57;UBERON:0007135!7.35e-07!57;UBERON:0000490!1.00e-06!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.68e-26;18!UBERON:0001986;6.68e-26;18!UBERON:0004852;6.68e-26;18!UBERON:0000487;7.75e-24;22!UBERON:0006914;1.54e-20;25!UBERON:0000490;1.00e-16;33!UBERON:0003915;4.62e-16;9!UBERON:0004700;4.62e-16;9!UBERON:0001917;4.62e-16;9!UBERON:0007500;2.40e-11;56!UBERON:0001981;2.40e-11;56!UBERON:0004537;2.40e-11;56!UBERON:0010523;1.12e-09;3!UBERON:0001915;1.12e-09;3!UBERON:0001982;1.12e-09;3!UBERON:0003688;2.10e-08;6!UBERON:0002358;2.10e-08;6!UBERON:0003684;2.10e-08;6!UBERON:0001178;2.10e-08;6!UBERON:0000055;3.96e-08;65!UBERON:0004573;4.59e-08;33!UBERON:0004571;4.59e-08;33!UBERON:0001637;6.97e-08;42!UBERON:0003509;6.97e-08;42!UBERON:0004572;6.97e-08;42!UBERON:0003513;5.64e-07;7 | |||
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| ||
|short_description=p13@RUSC2 | |short_description=p13@RUSC2 | ||
}} | }} |
Latest revision as of 07:34, 17 September 2015
Short description: | p13@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENST00000455600, NM_001135999, uc003zwx.3_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 8.48e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.48e-26 | 18 |
lining cell | 2.37e-25 | 58 |
barrier cell | 2.37e-25 | 58 |
endothelial cell of vascular tree | 2.57e-21 | 24 |
endothelial cell | 3.29e-20 | 36 |
meso-epithelial cell | 2.25e-19 | 45 |
squamous epithelial cell | 8.27e-17 | 63 |
endothelial cell of artery | 4.93e-16 | 9 |
mesodermal cell | 4.06e-15 | 121 |
aortic endothelial cell | 1.10e-12 | 6 |
omentum preadipocyte | 3.44e-10 | 3 |
capillary endothelial cell | 1.31e-09 | 3 |
preadipocyte | 1.38e-08 | 12 |
mesothelial cell | 3.21e-08 | 19 |
embryonic cell | 8.42e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 8.48e-26 | 18 |
endothelium | 8.48e-26 | 18 |
cardiovascular system endothelium | 8.48e-26 | 18 |
simple squamous epithelium | 7.16e-24 | 22 |
squamous epithelium | 1.43e-20 | 25 |
epithelial tube open at both ends | 1.03e-16 | 59 |
blood vessel | 1.03e-16 | 59 |
blood vasculature | 1.03e-16 | 59 |
vascular cord | 1.03e-16 | 59 |
endothelial tube | 4.93e-16 | 9 |
arterial system endothelium | 4.93e-16 | 9 |
endothelium of artery | 4.93e-16 | 9 |
vessel | 3.32e-15 | 68 |
splanchnic layer of lateral plate mesoderm | 7.35e-13 | 83 |
vasculature | 1.58e-12 | 78 |
vascular system | 1.58e-12 | 78 |
microcirculatory vessel | 1.31e-09 | 3 |
endothelium of capillary | 1.31e-09 | 3 |
capillary | 1.31e-09 | 3 |
epithelial tube | 2.10e-09 | 117 |
tube | 5.67e-09 | 192 |
artery | 7.27e-09 | 42 |
arterial blood vessel | 7.27e-09 | 42 |
arterial system | 7.27e-09 | 42 |
cardiovascular system | 2.32e-08 | 109 |
systemic artery | 2.35e-08 | 33 |
systemic arterial system | 2.35e-08 | 33 |
omentum | 2.35e-08 | 6 |
peritoneum | 2.35e-08 | 6 |
abdominal cavity | 2.35e-08 | 6 |
visceral peritoneum | 2.35e-08 | 6 |
circulatory system | 5.42e-08 | 112 |
anatomical conduit | 2.36e-07 | 240 |
trunk blood vessel | 6.05e-07 | 7 |