FFCP PHASE1:Hg19::chr9:35538616..35538650,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |EntrezGene=9853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23625 | |HGNC=23625 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |UniProt=Q8N2Y8 | ||
|association_with_transcript=0bp_to_ENST00000455600,NM_001135999,uc003zwx.3_5end | |association_with_transcript=0bp_to_ENST00000455600,NM_001135999,uc003zwx.3_5end | ||
|cluster_id=chr9:35538616..35538650,+ | |||
|description=CAGE_peak_5_at_RUSC2_5end | |description=CAGE_peak_5_at_RUSC2_5end | ||
|id=chr9:35538616..35538650,+ | |id=chr9:35538616..35538650,+ | ||
|ontology_enrichment_celltype=CL:0000222!3.98e-14!119;CL:0000055!7.65e-13!180;CL:0000213!2.92e-09!57;CL:0000215!2.92e-09!57;CL:0000057!6.40e-09!75;CL:0000220!8.45e-07!246 | |ontology_enrichment_celltype=CL:0000222!3.98e-14!119;CL:0000055!7.65e-13!180;CL:0000213!2.92e-09!57;CL:0000215!2.92e-09!57;CL:0000057!6.40e-09!75;CL:0000220!8.45e-07!246 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.38e-13,121;CL:0000213,1.05e-09,58;CL:0000215,1.05e-09,58;CL:0000057,2.77e-08,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.38e-19!241;UBERON:0000468!6.55e-19!659;UBERON:0000025!7.64e-18!194;UBERON:0000475!2.17e-17!365;UBERON:0000467!3.39e-17!625;UBERON:0000480!6.65e-17!626;UBERON:0001869!7.73e-17!32;UBERON:0000119!1.05e-16!312;UBERON:0000483!3.23e-16!309;UBERON:0001049!4.02e-16!57;UBERON:0005068!4.02e-16!57;UBERON:0006241!4.02e-16!57;UBERON:0007135!4.02e-16!57;UBERON:0000477!5.15e-16!286;UBERON:0002020!5.86e-16!34;UBERON:0003528!5.86e-16!34;UBERON:0001893!7.64e-16!34;UBERON:0003080!1.99e-15!42;UBERON:0002791!2.84e-15!33;UBERON:0002616!2.99e-15!59;UBERON:0002780!3.02e-15!41;UBERON:0001890!3.02e-15!41;UBERON:0006240!3.02e-15!41;UBERON:0003075!6.54e-15!86;UBERON:0007284!6.54e-15!86;UBERON:0001017!7.53e-15!82;UBERON:0002619!1.08e-14!22;UBERON:0005743!3.40e-14!86;UBERON:0001950!8.94e-14!20;UBERON:0004121!9.58e-14!169;UBERON:0000073!1.19e-13!94;UBERON:0001016!1.19e-13!94;UBERON:0001981!1.50e-13!60;UBERON:0007500!1.50e-13!60;UBERON:0004537!1.50e-13!60;UBERON:0006965!1.50e-13!60;UBERON:0000955!2.08e-13!69;UBERON:0006238!2.08e-13!69;UBERON:0002049!2.19e-13!79;UBERON:0007798!2.19e-13!79;UBERON:0000956!2.53e-13!25;UBERON:0000203!2.53e-13!25;UBERON:0002346!3.26e-13!90;UBERON:0000055!3.57e-13!69;UBERON:0000924!1.16e-12!173;UBERON:0006601!1.16e-12!173;UBERON:0004872!2.96e-12!84;UBERON:0000033!3.62e-12!123;UBERON:0003056!5.36e-12!61;UBERON:0000153!1.91e-11!129;UBERON:0007811!1.91e-11!129;UBERON:0002050!3.00e-11!605;UBERON:0005423!3.00e-11!605;UBERON:0007023!3.13e-11!115;UBERON:0000923!5.56e-11!604;UBERON:0005291!5.56e-11!604;UBERON:0006598!5.56e-11!604;UBERON:0002532!5.56e-11!604;UBERON:0000922!6.05e-11!612;UBERON:0001637!4.68e-10!42;UBERON:0003509!4.68e-10!42;UBERON:0004572!4.68e-10!42;UBERON:0003914!1.81e-08!118;UBERON:0004573!2.00e-08!33;UBERON:0004571!2.00e-08!33;UBERON:0000481!3.42e-08!347;UBERON:0000064!1.00e-07!219;UBERON:0004535!1.23e-07!110;UBERON:0001009!1.59e-07!113;UBERON:0000914!6.83e-07!83;UBERON:0002329!6.83e-07!83;UBERON:0003077!6.83e-07!83;UBERON:0003059!6.83e-07!83;UBERON:0007282!6.83e-07!83;UBERON:0009618!6.83e-07!83;UBERON:0007285!6.83e-07!83 | |ontology_enrichment_uberon=UBERON:0004111!4.38e-19!241;UBERON:0000468!6.55e-19!659;UBERON:0000025!7.64e-18!194;UBERON:0000475!2.17e-17!365;UBERON:0000467!3.39e-17!625;UBERON:0000480!6.65e-17!626;UBERON:0001869!7.73e-17!32;UBERON:0000119!1.05e-16!312;UBERON:0000483!3.23e-16!309;UBERON:0001049!4.02e-16!57;UBERON:0005068!4.02e-16!57;UBERON:0006241!4.02e-16!57;UBERON:0007135!4.02e-16!57;UBERON:0000477!5.15e-16!286;UBERON:0002020!5.86e-16!34;UBERON:0003528!5.86e-16!34;UBERON:0001893!7.64e-16!34;UBERON:0003080!1.99e-15!42;UBERON:0002791!2.84e-15!33;UBERON:0002616!2.99e-15!59;UBERON:0002780!3.02e-15!41;UBERON:0001890!3.02e-15!41;UBERON:0006240!3.02e-15!41;UBERON:0003075!6.54e-15!86;UBERON:0007284!6.54e-15!86;UBERON:0001017!7.53e-15!82;UBERON:0002619!1.08e-14!22;UBERON:0005743!3.40e-14!86;UBERON:0001950!8.94e-14!20;UBERON:0004121!9.58e-14!169;UBERON:0000073!1.19e-13!94;UBERON:0001016!1.19e-13!94;UBERON:0001981!1.50e-13!60;UBERON:0007500!1.50e-13!60;UBERON:0004537!1.50e-13!60;UBERON:0006965!1.50e-13!60;UBERON:0000955!2.08e-13!69;UBERON:0006238!2.08e-13!69;UBERON:0002049!2.19e-13!79;UBERON:0007798!2.19e-13!79;UBERON:0000956!2.53e-13!25;UBERON:0000203!2.53e-13!25;UBERON:0002346!3.26e-13!90;UBERON:0000055!3.57e-13!69;UBERON:0000924!1.16e-12!173;UBERON:0006601!1.16e-12!173;UBERON:0004872!2.96e-12!84;UBERON:0000033!3.62e-12!123;UBERON:0003056!5.36e-12!61;UBERON:0000153!1.91e-11!129;UBERON:0007811!1.91e-11!129;UBERON:0002050!3.00e-11!605;UBERON:0005423!3.00e-11!605;UBERON:0007023!3.13e-11!115;UBERON:0000923!5.56e-11!604;UBERON:0005291!5.56e-11!604;UBERON:0006598!5.56e-11!604;UBERON:0002532!5.56e-11!604;UBERON:0000922!6.05e-11!612;UBERON:0001637!4.68e-10!42;UBERON:0003509!4.68e-10!42;UBERON:0004572!4.68e-10!42;UBERON:0003914!1.81e-08!118;UBERON:0004573!2.00e-08!33;UBERON:0004571!2.00e-08!33;UBERON:0000481!3.42e-08!347;UBERON:0000064!1.00e-07!219;UBERON:0004535!1.23e-07!110;UBERON:0001009!1.59e-07!113;UBERON:0000914!6.83e-07!83;UBERON:0002329!6.83e-07!83;UBERON:0003077!6.83e-07!83;UBERON:0003059!6.83e-07!83;UBERON:0007282!6.83e-07!83;UBERON:0009618!6.83e-07!83;UBERON:0007285!6.83e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.42e-16;32!UBERON:0002619;8.88e-16;22!UBERON:0002791;3.33e-15;32!UBERON:0003528;4.25e-15;34!UBERON:0002020;4.25e-15;34!UBERON:0001893;6.92e-15;34!UBERON:0001950;8.78e-15;20!UBERON:0000956;2.11e-14;25!UBERON:0000203;2.11e-14;25!UBERON:0002780;1.39e-11;41!UBERON:0001890;1.39e-11;41!UBERON:0000073;6.48e-09;53!UBERON:0002616;6.48e-09;53!UBERON:0004573;1.66e-08;33!UBERON:0004571;1.66e-08;33!UBERON:0001637;5.28e-08;42!UBERON:0003509;5.28e-08;42!UBERON:0004572;5.28e-08;42!UBERON:0007500;9.30e-08;56!UBERON:0001981;9.30e-08;56!UBERON:0004537;9.30e-08;56!UBERON:0000955;8.25e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.42e-16;32!UBERON:0002619;8.88e-16;22!UBERON:0002791;3.33e-15;32!UBERON:0003528;4.25e-15;34!UBERON:0002020;4.25e-15;34!UBERON:0001893;6.92e-15;34!UBERON:0001950;8.78e-15;20!UBERON:0000956;2.11e-14;25!UBERON:0000203;2.11e-14;25!UBERON:0002780;1.39e-11;41!UBERON:0001890;1.39e-11;41!UBERON:0000073;6.48e-09;53!UBERON:0002616;6.48e-09;53!UBERON:0004573;1.66e-08;33!UBERON:0004571;1.66e-08;33!UBERON:0001637;5.28e-08;42!UBERON:0003509;5.28e-08;42!UBERON:0004572;5.28e-08;42!UBERON:0007500;9.30e-08;56!UBERON:0001981;9.30e-08;56!UBERON:0004537;9.30e-08;56!UBERON:0000955;8.25e-07;68 | ||
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| ||
|short_description=p5@RUSC2 | |short_description=p5@RUSC2 | ||
}} | }} |
Latest revision as of 07:34, 17 September 2015
Short description: | p5@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000455600, NM_001135999, uc003zwx.3_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.38e-13 | 121 |
lining cell | 1.05e-09 | 58 |
barrier cell | 1.05e-09 | 58 |
fibroblast | 2.77e-08 | 76 |