FFCP PHASE1:Hg19::chr8:1949290..1949308,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9920 | |EntrezGene=9920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29104 | |HGNC=29104 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_BC169331_5end | |association_with_transcript=-48bp_to_BC169331_5end | ||
|cluster_id=chr8:1949290..1949308,+ | |||
|description=CAGE_peak_8_at_KBTBD11_5end | |description=CAGE_peak_8_at_KBTBD11_5end | ||
|id=chr8:1949290..1949308,+ | |id=chr8:1949290..1949308,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.56e-13!42;CL:0000860!7.73e-12!45;CL:0002194!1.27e-09!63;CL:0000576!1.27e-09!63;CL:0000040!1.27e-09!63;CL:0000559!1.27e-09!63;CL:0002009!4.79e-09!65;CL:0000557!2.23e-08!71;CL:0000839!9.06e-08!70;CL:0000766!3.97e-07!76 | |ontology_enrichment_celltype=CL:0002057!2.56e-13!42;CL:0000860!7.73e-12!45;CL:0002194!1.27e-09!63;CL:0000576!1.27e-09!63;CL:0000040!1.27e-09!63;CL:0000559!1.27e-09!63;CL:0002009!4.79e-09!65;CL:0000557!2.23e-08!71;CL:0000839!9.06e-08!70;CL:0000766!3.97e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0002586;7.57e-18;3!CL:0000149;1.64e-13;4!CL:0002032;5.41e-07;1!CL:0000557;5.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.67e-18,3;CL:0000149,1.66e-13,4;CL:0000860,1.78e-08,42;CL:0002057,1.78e-08,42;CL:0000473,3.09e-07,48;CL:0000234,3.09e-07,48;CL:0000557,3.32e-07,67;CL:0002194,7.51e-07,59;CL:0000576,7.51e-07,59;CL:0000040,7.51e-07,59;CL:0000559,7.51e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.91e-17!115;UBERON:0005743!9.38e-12!86;UBERON:0001049!1.86e-10!57;UBERON:0005068!1.86e-10!57;UBERON:0006241!1.86e-10!57;UBERON:0007135!1.86e-10!57;UBERON:0000073!2.58e-10!94;UBERON:0001016!2.58e-10!94;UBERON:0002616!1.49e-09!59;UBERON:0001017!1.95e-09!82;UBERON:0003075!2.13e-09!86;UBERON:0007284!2.13e-09!86;UBERON:0002193!1.45e-08!112;UBERON:0002346!1.69e-08!90;UBERON:0000955!2.74e-08!69;UBERON:0006238!2.74e-08!69;UBERON:0001893!1.64e-07!34;UBERON:0002020!2.44e-07!34;UBERON:0003528!2.44e-07!34;UBERON:0000062!3.62e-07!511;UBERON:0002405!4.06e-07!115;UBERON:0002780!4.36e-07!41;UBERON:0001890!4.36e-07!41;UBERON:0006240!4.36e-07!41;UBERON:0002791!4.64e-07!33;UBERON:0000489!5.07e-07!32;UBERON:0002371!5.21e-07!80;UBERON:0002390!6.84e-07!102;UBERON:0003061!6.84e-07!102;UBERON:0003080!8.77e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;7.57e-18;3!UBERON:0001782;7.57e-18;3!UBERON:0005162;1.61e-11;2!UBERON:0000122;1.61e-11;2!UBERON:0000966;6.71e-11;5!UBERON:0005388;6.71e-11;5!UBERON:0001802;6.71e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001781,8.45e-23,4;UBERON:0001782,7.67e-18,3;UBERON:0005424,7.67e-18,3;UBERON:0000966,3.00e-15,6;UBERON:0005388,3.00e-15,6;UBERON:0001802,3.00e-15,6;UBERON:0005162,8.98e-12,2;UBERON:0000122,8.98e-12,2;UBERON:0002336,9.48e-07,1;UBERON:0011215,9.48e-07,1;UBERON:0001018,9.48e-07,1;UBERON:0002473,9.48e-07,1;UBERON:0005340,9.48e-07,1;UBERON:0003544,9.48e-07,1;UBERON:0005970,9.48e-07,1;UBERON:0002316,9.48e-07,1;UBERON:0001020,9.48e-07,1;UBERON:0002437,9.48e-07,1 | |||
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| ||
|short_description=p8@KBTBD11 | |short_description=p8@KBTBD11 | ||
}} | }} |
Latest revision as of 07:27, 17 September 2015
Short description: | p8@KBTBD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KBTBD11_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_BC169331_5end |
EntrezGene: | KBTBD11 |
HGNC: | 29104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.67e-18 | 3 |
visual pigment cell | 1.66e-13 | 4 |
classical monocyte | 1.78e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.78e-08 | 42 |
defensive cell | 3.09e-07 | 48 |
phagocyte | 3.09e-07 | 48 |
granulocyte monocyte progenitor cell | 3.32e-07 | 67 |
monopoietic cell | 7.51e-07 | 59 |
monocyte | 7.51e-07 | 59 |
monoblast | 7.51e-07 | 59 |
promonocyte | 7.51e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
layer of retina | 8.45e-23 | 4 |
pigmented layer of retina | 7.67e-18 | 3 |
presumptive retinal pigmented epithelium | 7.67e-18 | 3 |
retina | 3.00e-15 | 6 |
photoreceptor array | 3.00e-15 | 6 |
posterior segment of eyeball | 3.00e-15 | 6 |
multi cell component structure | 8.98e-12 | 2 |
neuron projection bundle | 8.98e-12 | 2 |
corpus callosum | 9.48e-07 | 1 |
central nervous system cell part cluster | 9.48e-07 | 1 |
axon tract | 9.48e-07 | 1 |
intercerebral commissure | 9.48e-07 | 1 |
dorsal telencephalic commissure | 9.48e-07 | 1 |
brain white matter | 9.48e-07 | 1 |
brain commissure | 9.48e-07 | 1 |
white matter | 9.48e-07 | 1 |
nervous system commissure | 9.48e-07 | 1 |
cerebral hemisphere white matter | 9.48e-07 | 1 |