FFCP PHASE1:Hg19::chr9:35490000..35490012,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |EntrezGene=9853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23625 | |HGNC=23625 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |UniProt=Q8N2Y8 | ||
|association_with_transcript=0bp_to_NM_014806,uc003zww.2,uc010mkq.2_5end | |association_with_transcript=0bp_to_NM_014806,uc003zww.2,uc010mkq.2_5end | ||
|cluster_id=chr9:35490000..35490012,+ | |||
|description=CAGE_peak_9_at_RUSC2_5end | |description=CAGE_peak_9_at_RUSC2_5end | ||
|id=chr9:35490000..35490012,+ | |id=chr9:35490000..35490012,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.40e-09!42;CL:0000860!1.86e-08!45;CL:0002194!1.79e-07!63;CL:0000576!1.79e-07!63;CL:0000040!1.79e-07!63;CL:0000559!1.79e-07!63;CL:0000839!3.55e-07!70;CL:0000557!8.35e-07!71 | |ontology_enrichment_celltype=CL:0002057!3.40e-09!42;CL:0000860!1.86e-08!45;CL:0002194!1.79e-07!63;CL:0000576!1.79e-07!63;CL:0000040!1.79e-07!63;CL:0000559!1.79e-07!63;CL:0000839!3.55e-07!70;CL:0000557!8.35e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.38e-12!659;UBERON:0000467!1.53e-12!625;UBERON:0000480!2.59e-12!626;UBERON:0002050!6.02e-09!605;UBERON:0005423!6.02e-09!605;UBERON:0001049!6.35e-09!57;UBERON:0005068!6.35e-09!57;UBERON:0006241!6.35e-09!57;UBERON:0007135!6.35e-09!57;UBERON:0000923!9.75e-09!604;UBERON:0005291!9.75e-09!604;UBERON:0006598!9.75e-09!604;UBERON:0002532!9.75e-09!604;UBERON:0000062!1.70e-08!511;UBERON:0002616!2.13e-08!59;UBERON:0000073!3.03e-08!94;UBERON:0001016!3.03e-08!94;UBERON:0000922!3.06e-08!612;UBERON:0002780!4.83e-08!41;UBERON:0001890!4.83e-08!41;UBERON:0006240!4.83e-08!41;UBERON:0001017!5.52e-08!82;UBERON:0005743!6.87e-08!86;UBERON:0002204!9.69e-08!167;UBERON:0000025!1.18e-07!194;UBERON:0004111!1.26e-07!241;UBERON:0007023!1.35e-07!115;UBERON:0003080!1.71e-07!42;UBERON:0001893!1.97e-07!34;UBERON:0000955!2.10e-07!69;UBERON:0006238!2.10e-07!69;UBERON:0002020!2.48e-07!34;UBERON:0003528!2.48e-07!34;UBERON:0000475!2.80e-07!365;UBERON:0003075!4.11e-07!86;UBERON:0007284!4.11e-07!86;UBERON:0002791!5.95e-07!33;UBERON:0001869!6.91e-07!32 | |ontology_enrichment_uberon=UBERON:0000468!1.38e-12!659;UBERON:0000467!1.53e-12!625;UBERON:0000480!2.59e-12!626;UBERON:0002050!6.02e-09!605;UBERON:0005423!6.02e-09!605;UBERON:0001049!6.35e-09!57;UBERON:0005068!6.35e-09!57;UBERON:0006241!6.35e-09!57;UBERON:0007135!6.35e-09!57;UBERON:0000923!9.75e-09!604;UBERON:0005291!9.75e-09!604;UBERON:0006598!9.75e-09!604;UBERON:0002532!9.75e-09!604;UBERON:0000062!1.70e-08!511;UBERON:0002616!2.13e-08!59;UBERON:0000073!3.03e-08!94;UBERON:0001016!3.03e-08!94;UBERON:0000922!3.06e-08!612;UBERON:0002780!4.83e-08!41;UBERON:0001890!4.83e-08!41;UBERON:0006240!4.83e-08!41;UBERON:0001017!5.52e-08!82;UBERON:0005743!6.87e-08!86;UBERON:0002204!9.69e-08!167;UBERON:0000025!1.18e-07!194;UBERON:0004111!1.26e-07!241;UBERON:0007023!1.35e-07!115;UBERON:0003080!1.71e-07!42;UBERON:0001893!1.97e-07!34;UBERON:0000955!2.10e-07!69;UBERON:0006238!2.10e-07!69;UBERON:0002020!2.48e-07!34;UBERON:0003528!2.48e-07!34;UBERON:0000475!2.80e-07!365;UBERON:0003075!4.11e-07!86;UBERON:0007284!4.11e-07!86;UBERON:0002791!5.95e-07!33;UBERON:0001869!6.91e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.00e-08;34!UBERON:0002619;9.02e-08;22!UBERON:0003528;1.38e-07;34!UBERON:0002020;1.38e-07;34!UBERON:0001950;2.44e-07;20!UBERON:0001869;3.05e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.31e-09,56;UBERON:0005068,4.31e-09,56;UBERON:0006241,4.31e-09,56;UBERON:0007135,4.31e-09,56;UBERON:0000073,6.38e-09,53;UBERON:0002616,6.38e-09,53;UBERON:0003075,1.09e-08,82;UBERON:0007284,1.09e-08,82;UBERON:0001893,1.69e-08,34;UBERON:0003528,2.52e-08,34;UBERON:0002020,2.52e-08,34;UBERON:0001869,4.45e-08,32;UBERON:0002619,5.02e-08,22;UBERON:0002346,5.97e-08,86;UBERON:0010314,7.87e-08,132;UBERON:0001950,1.45e-07,20;UBERON:0002780,2.56e-07,41;UBERON:0001890,2.56e-07,41;UBERON:0003080,2.56e-07,41;UBERON:0006240,2.56e-07,41;UBERON:0010371,2.61e-07,104;UBERON:0003056,3.03e-07,61;UBERON:0002791,7.32e-07,32;UBERON:0000956,9.17e-07,25;UBERON:0000203,9.17e-07,25 | |||
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|phase1_expression=0.54503513781167,0.428201047781966,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.783556884599516,1.22866968250754,0,0,0,0.247532705920093,0.331397375727916,2.01697543935533,0.602694528023977,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0.393364276848904,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0,0,1.10799081706375,1.00272223735071,0.434021741431704,0.447830948479849,0.32389366601898,0.515151135268373,1.16318591023652,2.64513160582167,0.485168122375632,0.929716147622738,1.23350366406548,0.929119112685311,0.863077176966451,0.512321413058201,0.236482229888585,0.689491361473237,1.93645405075148,2.70852973188684,1.12945403725563,1.09162460023138,0.449446968890169,0.612167784741805,1.60464513538047,1.91801137739712,0.989553900560148,0.797854630486527,0.426224750532694,0.580418477257168,1.13477044938228,1.24564449799115,1.25624332628372,1.0429658368404,0.868755378820466,1.21079900526674,0.736555271975129,0.316462387440884,0.211255286311942,0.425208599930087,0.628975936525128,0.336985893439485,0.150176892841506,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0,0.486634870302636,0.472674085820339,0.443458794925128,0.175669571386252,1.76821751921912,0,0,0.97364218096405,0.522389211897802,0.132957960518865,0.238490624305342,0,0,0.596287222100115,0,0.347140501607594,1.13061588384802,0,0.825354125820202,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0.760272105718513,0.24406205754817,0,0,0.17859945656816,0.44905874525234,0.225222960966644,0,1.89853131913626,0.549605231791222,0,0,0,0,0.886413581652058,1.19168262731897,1.14734648299525,0.354668382198357,0,0,0.74000264525148,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0.70296429550139,0.624320153660641,0,0.747243402759005,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0.910161361938026,2.15585442544872,0.168336113954066,0.125118519871964,0,0.438977620880838,0.919463387397059,0.45071417671979,0.453728732640084,1.07633781413317,0.85422955527427,0.635795703478686,1.20036438433761,0.206105058476878,0.515281080091258,0.930584281657949,0.675105328965065,0.194874010322397,1.51460264546469,0.552299391853796,0.646584227275248,0.710019185033229,0.201504196455281,0.339121184620975,0.386521706326594,0.545492241181669,0,0,0.132529768321485,0,0.207322110030741,0,0.72995471815166,1.56449532329816,1.92972281457866,1.38134921352481,0,0,0,0.337169380156203,0,0.330881918197182,0,0.474541238222193,0,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,1.96565443335525,1.18157981336281,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.100528972411631,0,0.651616610620649,0,0,0.115930404975077,1.52631302506568,0.866198686566443,0,0.190254152234598,0,0,0.492434012174795,0.936017060556951,0.743155811443641,0,1.00789276919316,0.283550194484773,0.179117045405697,0,0,0,1.40877494421162,0.414656231081544,1.15295962733569,0.6312121671319,0.317489471460845,0,2.34434894420094,0,0.411309970813294,0.300343057843917,0.285826432630578,0.224262168690721,0.87192013766656,0.8800594298514,0.517086863031111,0,0,1.32969058292435,0,0.257207374262142,0,0,0.714889968290738,0,1.64648067356154,0,0.355391948742546,0,0,0.871533458600294,0.599837947092342,0,1.00451418286425,0,0.958499421966331,2.29723871668228,1.42636905040718,0.434343920002738,0.410952645100767,1.07436577943937,0,0,0.215627574859517,0,0.508189248444927,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0,0.36807447515742,0,0,0.415941723061614,1.78428988797162,1.10391690523754,0.819989904948992,0.902838299183157,0,0,0,0.184369168541703,0.434418072340414,0.979005787313703,1.02943027143257,0.620304078368662,0.431428401637234,0,0,0,0,1.48864684691266,1.38115775959256,1.12264037773229,0.384417447767103,1.02341449813341,1.12597744800525,2.96836132889982,0.308419387605311,0.532685175939381,0.492762936082855,1.03850885836724,0.348631135379878,0,0.40101294060657,0.0920809889358963,0.229628896329213,0.364182336013434,0.524497659837696,0.902399225814824,0.231046011313244,2.35304930753057,0,0.316654886678627,0,0.680374821106063,0,1.54227252690289,0.541892875087706,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0.984043937099117,0,0.103041011647722,0.732555718546747,0.330037999682352,0,0,1.6068392984416,0.290012154876366,0.462145851343933,0,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,0.356128142586949,0.330569830721956,0.384380134730212,0.510450849978337,0.30347334256665,0.464845549297286,0.31481234683064,1.3940745403212,0.616067160352178,0.532306030317022,0,0.74129687641568,0.429374660225974,0.372158369359667,0.949138274156178,0.953150969619124,1.02359116524534,0.855877976067841,0.318203247925937,0,0.179872457583315,0.2745370297360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| ||
|short_description=p9@RUSC2 | |short_description=p9@RUSC2 | ||
}} | }} |
Latest revision as of 07:26, 17 September 2015
Short description: | p9@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_014806, uc003zww.2, uc010mkq.2_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.31e-09 | 56 |
neural rod | 4.31e-09 | 56 |
future spinal cord | 4.31e-09 | 56 |
neural keel | 4.31e-09 | 56 |
regional part of nervous system | 6.38e-09 | 53 |
regional part of brain | 6.38e-09 | 53 |
neural plate | 1.09e-08 | 82 |
presumptive neural plate | 1.09e-08 | 82 |
telencephalon | 1.69e-08 | 34 |
brain grey matter | 2.52e-08 | 34 |
gray matter | 2.52e-08 | 34 |
cerebral hemisphere | 4.45e-08 | 32 |
regional part of cerebral cortex | 5.02e-08 | 22 |
neurectoderm | 5.97e-08 | 86 |
structure with developmental contribution from neural crest | 7.87e-08 | 132 |
neocortex | 1.45e-07 | 20 |
regional part of forebrain | 2.56e-07 | 41 |
forebrain | 2.56e-07 | 41 |
anterior neural tube | 2.56e-07 | 41 |
future forebrain | 2.56e-07 | 41 |
ecto-epithelium | 2.61e-07 | 104 |
pre-chordal neural plate | 3.03e-07 | 61 |
regional part of telencephalon | 7.32e-07 | 32 |
cerebral cortex | 9.17e-07 | 25 |
pallium | 9.17e-07 | 25 |