FFCP PHASE1:Hg19::chr1:27561175..27561202,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23038 | |EntrezGene=23038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29175 | |HGNC=29175 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000361771_5end | |association_with_transcript=16bp_to_ENST00000361771_5end | ||
|cluster_id=chr1:27561175..27561202,+ | |||
|description=CAGE_peak_2_at_WDTC1_5end | |description=CAGE_peak_2_at_WDTC1_5end | ||
|id=chr1:27561175..27561202,+ | |id=chr1:27561175..27561202,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.16e-09!52;CL:0000542!2.18e-09!53;CL:0000051!2.18e-09!53;CL:0000791!2.08e-08!18;CL:0000789!2.08e-08!18;CL:0002420!2.08e-08!18;CL:0002419!2.08e-08!18;CL:0000790!2.08e-08!18 | |ontology_enrichment_celltype=CL:0000838!1.16e-09!52;CL:0000542!2.18e-09!53;CL:0000051!2.18e-09!53;CL:0000791!2.08e-08!18;CL:0000789!2.08e-08!18;CL:0002420!2.08e-08!18;CL:0002419!2.08e-08!18;CL:0000790!2.08e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.57e-08;18!CL:0000789;1.57e-08;18!CL:0002419;1.57e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.20e-09,52;CL:0000542,2.25e-09,53;CL:0000051,2.25e-09,53;CL:0000791,2.07e-08,18;CL:0000789,2.07e-08,18;CL:0002420,2.07e-08,18;CL:0002419,2.07e-08,18;CL:0000790,2.07e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.57e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.94e-40!115;UBERON:0001049!4.84e-11!57;UBERON:0005068!4.84e-11!57;UBERON:0006241!4.84e-11!57;UBERON:0007135!4.84e-11!57;UBERON:0002616!1.06e-09!59;UBERON:0000955!1.43e-08!69;UBERON:0006238!1.43e-08!69;UBERON:0002780!5.76e-08!41;UBERON:0001890!5.76e-08!41;UBERON:0006240!5.76e-08!41;UBERON:0003080!7.58e-08!42;UBERON:0003075!2.25e-07!86;UBERON:0007284!2.25e-07!86;UBERON:0001017!6.43e-07!82;UBERON:0005743!7.04e-07!86;UBERON:0002346!9.83e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!4.94e-40!115;UBERON:0001049!4.84e-11!57;UBERON:0005068!4.84e-11!57;UBERON:0006241!4.84e-11!57;UBERON:0007135!4.84e-11!57;UBERON:0002616!1.06e-09!59;UBERON:0000955!1.43e-08!69;UBERON:0006238!1.43e-08!69;UBERON:0002780!5.76e-08!41;UBERON:0001890!5.76e-08!41;UBERON:0006240!5.76e-08!41;UBERON:0003080!7.58e-08!42;UBERON:0003075!2.25e-07!86;UBERON:0007284!2.25e-07!86;UBERON:0001017!6.43e-07!82;UBERON:0005743!7.04e-07!86;UBERON:0002346!9.83e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.06e-10;114!UBERON:0000073;5.44e-07;53!UBERON:0002616;5.44e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.85e-39,114;UBERON:0001049,3.50e-11,56;UBERON:0005068,3.50e-11,56;UBERON:0006241,3.50e-11,56;UBERON:0007135,3.50e-11,56;UBERON:0000073,5.26e-11,53;UBERON:0002616,5.26e-11,53;UBERON:0000955,1.14e-08,68;UBERON:0006238,1.14e-08,68;UBERON:0003075,2.28e-08,82;UBERON:0007284,2.28e-08,82;UBERON:0002780,5.64e-08,41;UBERON:0001890,5.64e-08,41;UBERON:0003080,5.64e-08,41;UBERON:0006240,5.64e-08,41;UBERON:0002346,1.23e-07,86;UBERON:0001017,5.35e-07,81 | |||
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| ||
|short_description=p2@WDTC1 | |short_description=p2@WDTC1 | ||
}} | }} |
Latest revision as of 07:24, 17 September 2015
Short description: | p2@WDTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WDTC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000361771_5end |
EntrezGene: | WDTC1 |
HGNC: | 29175 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.20e-09 | 52 |
lymphocyte | 2.25e-09 | 53 |
common lymphoid progenitor | 2.25e-09 | 53 |
mature alpha-beta T cell | 2.07e-08 | 18 |
alpha-beta T cell | 2.07e-08 | 18 |
immature T cell | 2.07e-08 | 18 |
mature T cell | 2.07e-08 | 18 |
immature alpha-beta T cell | 2.07e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.85e-39 | 114 |
neural tube | 3.50e-11 | 56 |
neural rod | 3.50e-11 | 56 |
future spinal cord | 3.50e-11 | 56 |
neural keel | 3.50e-11 | 56 |
regional part of nervous system | 5.26e-11 | 53 |
regional part of brain | 5.26e-11 | 53 |
brain | 1.14e-08 | 68 |
future brain | 1.14e-08 | 68 |
neural plate | 2.28e-08 | 82 |
presumptive neural plate | 2.28e-08 | 82 |
regional part of forebrain | 5.64e-08 | 41 |
forebrain | 5.64e-08 | 41 |
anterior neural tube | 5.64e-08 | 41 |
future forebrain | 5.64e-08 | 41 |
neurectoderm | 1.23e-07 | 86 |
central nervous system | 5.35e-07 | 81 |