FFCP PHASE1:Hg19::chr9:35489666..35489679,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9853 | |EntrezGene=9853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23625 | |HGNC=23625 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |UniProt=Q8N2Y8 | ||
|association_with_transcript=-327bp_to_NM_014806,uc003zww.2,uc010mkq.2_5end | |association_with_transcript=-327bp_to_NM_014806,uc003zww.2,uc010mkq.2_5end | ||
|cluster_id=chr9:35489666..35489679,+ | |||
|description=CAGE_peak_8_at_RUSC2_5end | |description=CAGE_peak_8_at_RUSC2_5end | ||
|id=chr9:35489666..35489679,+ | |id=chr9:35489666..35489679,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.34e-10!180;CL:0000057!4.65e-08!75;CL:0000359!6.90e-08!32;CL:0000136!7.93e-08!15 | |ontology_enrichment_celltype=CL:0000055!8.34e-10!180;CL:0000057!4.65e-08!75;CL:0000359!6.90e-08!32;CL:0000136!7.93e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.42e-10;32!CL:0000136;1.40e-09;13!CL:0002334;1.87e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.80e-11,32;CL:0000136,3.17e-10,15;CL:0000057,3.86e-08,76;CL:0000192,8.55e-08,43;CL:0000514,8.55e-08,43;CL:0002620,5.59e-07,23;CL:0002334,8.36e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.86e-12!659;UBERON:0000475!6.04e-11!365;UBERON:0000467!8.28e-11!625;UBERON:0000480!1.37e-10!626;UBERON:0007023!4.97e-09!115;UBERON:0004573!5.77e-09!33;UBERON:0004571!5.77e-09!33;UBERON:0001049!1.09e-08!57;UBERON:0005068!1.09e-08!57;UBERON:0006241!1.09e-08!57;UBERON:0007135!1.09e-08!57;UBERON:0000062!1.75e-08!511;UBERON:0000025!2.78e-08!194;UBERON:0000477!2.86e-08!286;UBERON:0001637!3.41e-08!42;UBERON:0003509!3.41e-08!42;UBERON:0004572!3.41e-08!42;UBERON:0002616!9.58e-08!59;UBERON:0004111!4.86e-07!241;UBERON:0000955!7.71e-07!69;UBERON:0006238!7.71e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.21e-11;33!UBERON:0004571;7.21e-11;33!UBERON:0001637;1.49e-07;42!UBERON:0003509;1.49e-07;42!UBERON:0004572;1.49e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.24e-12,33;UBERON:0004571,2.24e-12,33;UBERON:0001637,1.85e-10,42;UBERON:0003509,1.85e-10,42;UBERON:0004572,1.85e-10,42;UBERON:0001049,2.47e-09,56;UBERON:0005068,2.47e-09,56;UBERON:0006241,2.47e-09,56;UBERON:0007135,2.47e-09,56;UBERON:0000073,3.52e-08,53;UBERON:0002616,3.52e-08,53;UBERON:0000025,2.79e-07,192;UBERON:0003076,4.77e-07,15;UBERON:0003057,4.77e-07,15;UBERON:0007023,6.45e-07,114 | |||
|phase1_expression=3.27021082687002,1.49870366723688,6.06103937612676,3.00219895059391,0.893922188854576,6.10636966870258,5.06599756336621,2.52687949370732,0.261185628199839,1.96587149201207,2.09340350391728,0.218441372130172,0,0.247532705920093,0.331397375727916,2.6893005858071,1.20538905604795,0,1.46379839637152,0.492484232307152,0.816002764977012,1.25381888591235,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,1.18009283054671,0,0.154816123316076,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,1.01778767145695,3.02300754951048,1.21292030593908,1.85943229524548,2.46700732813095,1.54853185447552,1.1507695692886,1.2808035326455,0.236482229888585,1.37898272294647,3.87290810150296,0,1.12945403725563,0.818718450173537,1.34834090667051,1.22433556948361,2.24650318953266,1.91801137739712,0.659702600373432,0.797854630486527,1.27867425159808,0.870627715885752,2.26954089876456,0.622822248995575,2.26123798731069,0.521482918420201,2.17188844705117,0.605399502633369,0.736555271975129,0.949387162322653,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,2.89151321907653,2.50668955317945,2.462390822334,0,1.94653948121054,0.661743720148475,0.665188192387692,0.702678285545008,1.11332214173056,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.47880366186723,1.2663051166458,2.25095607382472,2.29469296599051,0.709336764396714,1.12135520028461,0,0.98667019366864,0.311211035399766,0.538842688278752,0.326923806226917,1.51357427644931,0.576175924479999,0.937285727335186,0,0.570471821544449,0,0.352303495931295,0,0.421352420106746,0.204154171254893,0.245668634623536,0.619954687054593,1.18800285728205,0.741800787835671,0,2.15585442544872,0.168336113954066,0.250237039743928,0.554128230968366,2.19488810440419,2.14541457059314,0.600952235626387,0.567160915800105,5.02290979928813,2.98980344345994,1.69545520927649,2.40072876867522,1.75189299705346,7.47157566132325,1.8611685633159,6.41350062516812,3.02054715999716,3.78650661366172,1.65689817556139,0.323292113637624,4.61512470271599,1.0075209822764,1.86516651541536,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.310983165046111,0.252320850875628,0,4.69348596989448,1.28648187638577,2.76269842704961,0,0,0.946454400318751,0.505754070234305,0.241011029883482,0.441175890929576,0.871517776369625,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0.122988438543114,0.857839051492628,0.329250856225877,1.1240175325762,0.201057944823262,0,0,0,0,0.463721619900307,0.939269553886573,0.288732895522148,0,0.190254152234598,0,0,0,0.468008530278475,0.445893486866185,0,1.00789276919316,0,0.806026704325635,0.581267877027924,0.383382679165211,0.492663237895943,0.528290604079356,1.86595303986695,0.144119953416961,1.13618190083742,0.126995788584338,1.14596527667483,0,0,0,0,0.285826432630578,0.448524337381443,0,0.5867062865676,1.29271715757778,0,2.535908257668,0.797814349754612,0,0,0,0,0.428933980974443,0,0.823240336780769,0.977208552881205,0.355391948742546,0,1.80863626235752,1.74306691720059,1.89948683245908,0,0,0,1.67737398844108,0,0,1.73737568001095,0.205476322550383,3.9393411912777,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.828831026872071,0.36807447515742,0,0.271265023699736,1.66376689224646,1.42743191037729,2.20783381047509,2.57711112983969,0,4.5481500811197,3.10419213877515,1.32845119707087,1.10621501125022,0.347534457872331,0.587403472388222,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,1.5156378572313,1.66435439510497,0,6.4508030032882,5.98501695823444,2.52594084989766,4.35673107469383,4.09365799253363,4.18220194973379,0,1.23367755042124,1.06537035187876,0.821271560138091,1.03850885836724,1.04589340613963,0.725156697549733,0.40101294060657,0.184161977871793,0.918515585316854,0.364182336013434,0.786746489756545,0.902399225814824,0.616122696835318,0,0,0.527758144464379,0,0.340187410553031,0.431831832204279,0,0.270946437543853,0,1.01950509218015,0,0.895499018888713,0,0,0,0,0.650756789328606,0.618246069886334,0.366277859273374,0.330037999682352,0.574265537996172,0,0,1.06337790121334,0,0,0.551346289938122,0.429680979473094,0.580066775656914,0.0852266274161009,0.890320356467374,0.495854746082934,0.192190067365106,0.638063562472921,0.2023155617111,0.929691098594572,6.61105928344344,2.7881490806424,2.7723022215848,5.32306030317022,3.47973196830029,1.11194531462352,1.00187420719394,0,0.316379424718726,0.953150969619124,0.767693373934002,0.42793898803392,2.22742273548156,1.56989728039846,0.539617372749944,0.274537029736055,0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|phase1_expression=3.27021082687002,1.49870366723688,6.06103937612676,3.00219895059391,0.893922188854576,6.10636966870258,5.06599756336621,2.52687949370732,0.261185628199839,1.96587149201207,2.09340350391728,0.218441372130172,0,0.247532705920093,0.331397375727916,2.6893005858071,1.20538905604795,0,1.46379839637152,0.492484232307152,0.816002764977012,1.25381888591235,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,1.18009283054671,0,0.154816123316076,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,1.01778767145695,3.02300754951048,1.21292030593908,1.85943229524548,2.46700732813095,1.54853185447552,1.1507695692886,1.2808035326455,0.236482229888585,1.37898272294647,3.87290810150296,0,1.12945403725563,0.818718450173537,1.34834090667051,1.22433556948361,2.24650318953266,1.91801137739712,0.659702600373432,0.797854630486527,1.27867425159808,0.870627715885752,2.26954089876456,0.622822248995575,2.26123798731069,0.521482918420201,2.17188844705117,0.605399502633369,0.736555271975129,0.949387162322653,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,2.89151321907653,2.50668955317945,2.462390822334,0,1.94653948121054,0.661743720148475,0.665188192387692,0.702678285545008,1.11332214173056,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,3.47880366186723,1.2663051166458,2.25095607382472,2.29469296599051,0.709336764396714,1.12135520028461,0,0.98667019366864,0.311211035399766,0.538842688278752,0.326923806226917,1.51357427644931,0.576175924479999,0.937285727335186,0,0.570471821544449,0,0.352303495931295,0,0.421352420106746,0.204154171254893,0.245668634623536,0.619954687054593,1.18800285728205,0.741800787835671,0,2.15585442544872,0.168336113954066,0.250237039743928,0.554128230968366,2.19488810440419,2.14541457059314,0.600952235626387,0.567160915800105,5.02290979928813,2.98980344345994,1.69545520927649,2.40072876867522,1.75189299705346,7.47157566132325,1.8611685633159,6.41350062516812,3.02054715999716,3.78650661366172,1.65689817556139,0.323292113637624,4.61512470271599,1.0075209822764,1.86516651541536,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.310983165046111,0.252320850875628,0,4.69348596989448,1.28648187638577,2.76269842704961,0,0,0.946454400318751,0.505754070234305,0.241011029883482,0.441175890929576,0.871517776369625,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0.8231480226628,0,0,0.982827216677626,0,0,0.122988438543114,0.857839051492628,0.329250856225877,1.1240175325762,0.201057944823262,0,0,0,0,0.463721619900307,0.939269553886573,0.288732895522148,0,0.190254152234598,0,0,0,0.468008530278475,0.445893486866185,0,1.00789276919316,0,0.806026704325635,0.581267877027924,0.383382679165211,0.492663237895943,0.528290604079356,1.86595303986695,0.144119953416961,1.13618190083742,0.126995788584338,1.14596527667483,0,0,0,0,0.285826432630578,0.448524337381443,0,0.5867062865676,1.29271715757778,0,2.535908257668,0.797814349754612,0,0,0,0,0.428933980974443,0,0.823240336780769,0.977208552881205,0.355391948742546,0,1.80863626235752,1.74306691720059,1.89948683245908,0,0,0,1.67737398844108,0,0,1.73737568001095,0.205476322550383,3.9393411912777,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.828831026872071,0.36807447515742,0,0.271265023699736,1.66376689224646,1.42743191037729,2.20783381047509,2.57711112983969,0,4.5481500811197,3.10419213877515,1.32845119707087,1.10621501125022,0.347534457872331,0.587403472388222,0.343143423810856,0.206768026122887,0.215714200818617,0.320182673410333,1.5156378572313,1.66435439510497,0,6.4508030032882,5.98501695823444,2.52594084989766,4.35673107469383,4.09365799253363,4.18220194973379,0,1.23367755042124,1.06537035187876,0.821271560138091,1.03850885836724,1.04589340613963,0.725156697549733,0.40101294060657,0.184161977871793,0.918515585316854,0.364182336013434,0.786746489756545,0.902399225814824,0.616122696835318,0,0,0.527758144464379,0,0.340187410553031,0.431831832204279,0,0.270946437543853,0,1.01950509218015,0,0.895499018888713,0,0,0,0,0.650756789328606,0.618246069886334,0.366277859273374,0.330037999682352,0.574265537996172,0,0,1.06337790121334,0,0,0.551346289938122,0.429680979473094,0.580066775656914,0.0852266274161009,0.890320356467374,0.495854746082934,0.192190067365106,0.638063562472921,0.2023155617111,0.929691098594572,6.61105928344344,2.7881490806424,2.7723022215848,5.32306030317022,3.47973196830029,1.11194531462352,1.00187420719394,0,0.316379424718726,0.953150969619124,0.767693373934002,0.42793898803392,2.22742273548156,1.56989728039846,0.539617372749944,0.274537029736055,0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| ||
|short_description=p8@RUSC2 | |short_description=p8@RUSC2 | ||
}} | }} |
Latest revision as of 07:23, 17 September 2015
Short description: | p8@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -327bp_to_NM_014806, uc003zww.2, uc010mkq.2_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.80e-11 | 32 |
fat cell | 3.17e-10 | 15 |
fibroblast | 3.86e-08 | 76 |
smooth muscle cell | 8.55e-08 | 43 |
smooth muscle myoblast | 8.55e-08 | 43 |
skin fibroblast | 5.59e-07 | 23 |
preadipocyte | 8.36e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 2.24e-12 | 33 |
systemic arterial system | 2.24e-12 | 33 |
artery | 1.85e-10 | 42 |
arterial blood vessel | 1.85e-10 | 42 |
arterial system | 1.85e-10 | 42 |
neural tube | 2.47e-09 | 56 |
neural rod | 2.47e-09 | 56 |
future spinal cord | 2.47e-09 | 56 |
neural keel | 2.47e-09 | 56 |
regional part of nervous system | 3.52e-08 | 53 |
regional part of brain | 3.52e-08 | 53 |
tube | 2.79e-07 | 192 |
posterior neural tube | 4.77e-07 | 15 |
chordal neural plate | 4.77e-07 | 15 |
adult organism | 6.45e-07 | 114 |