FFCP PHASE1:Hg19::chr11:20791058..20791067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4745 | |EntrezGene=4745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7750 | |HGNC=7750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=287bp_to_ENST00000528046_5end | |association_with_transcript=287bp_to_ENST00000528046_5end | ||
|cluster_id=chr11:20791058..20791067,+ | |||
|coexpression_cluster_id=C177 | |coexpression_cluster_id=C177 | ||
|description=CAGE_peak_10_at_NELL1_5end | |description=CAGE_peak_10_at_NELL1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | ||
|ontology_enrichment_disease=DOID:1909!3.61e-34!2 | |ontology_enrichment_disease=DOID:1909!3.61e-34!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.74e-50;2 | |ontology_enrichment_disease_v019=DOID:1909;2.74e-50;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.74e-50,2 | |||
|ontology_enrichment_uberon=UBERON:0000941!2.39e-66!1;UBERON:0004904!2.39e-66!1;UBERON:0002464!2.39e-66!1;UBERON:0001021!2.39e-66!1;UBERON:0001785!2.39e-66!1;UBERON:0003714!5.04e-34!2;UBERON:0005162!5.04e-34!2;UBERON:0000122!5.04e-34!2;UBERON:0000010!1.12e-08!8 | |ontology_enrichment_uberon=UBERON:0000941!2.39e-66!1;UBERON:0004904!2.39e-66!1;UBERON:0002464!2.39e-66!1;UBERON:0001021!2.39e-66!1;UBERON:0001785!2.39e-66!1;UBERON:0003714!5.04e-34!2;UBERON:0005162!5.04e-34!2;UBERON:0000122!5.04e-34!2;UBERON:0000010!1.12e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000010;2.45e-12;8!UBERON:0004732;5.70e-09;13!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0000010;2.45e-12;8!UBERON:0004732;5.70e-09;13!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000010,2.45e-12,8;UBERON:0004732,5.70e-09,13;UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p10@NELL1 | |short_description=p10@NELL1 | ||
}} | }} |
Latest revision as of 07:21, 17 September 2015
Short description: | p10@NELL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NELL1_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | 287bp_to_ENST00000528046_5end |
EntrezGene: | NELL1 |
HGNC: | 7750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
peripheral nervous system | 2.45e-12 | 8 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.74e-50 | 2 |