FFCP PHASE1:Hg19::chr20:57582326..57582367,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1522 | |EntrezGene=1522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2547 | |HGNC=2547 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBR2 | |UniProt=Q9UBR2 | ||
|association_with_transcript=-17bp_to_NM_001336,uc002yai.2,uc002yaj.3_5end | |association_with_transcript=-17bp_to_NM_001336,uc002yai.2,uc002yaj.3_5end | ||
|cluster_id=chr20:57582326..57582367,- | |||
|description=CAGE_peak_2_at_CTSZ_5end | |description=CAGE_peak_2_at_CTSZ_5end | ||
|id=chr20:57582326..57582367,- | |id=chr20:57582326..57582367,- | ||
|ontology_enrichment_celltype=CL:0002371!2.05e-19!591;CL:0000144!3.65e-17!625;CL:0000548!3.18e-16!679;CL:0000004!3.18e-16!679;CL:0000255!3.18e-16!679;CL:0000012!2.78e-15!682;CL:0000055!4.43e-15!180;CL:0000222!3.24e-13!119;CL:0000057!5.30e-12!75;CL:0000220!5.80e-10!246;CL:0000063!9.30e-10!578;CL:0002321!2.32e-09!248;CL:0000003!5.77e-09!722;CL:0000183!1.09e-07!59;CL:0000192!2.87e-07!42;CL:0000514!2.87e-07!42;CL:0000680!3.01e-07!57;CL:0000056!3.01e-07!57;CL:0000355!3.01e-07!57 | |ontology_enrichment_celltype=CL:0002371!2.05e-19!591;CL:0000144!3.65e-17!625;CL:0000548!3.18e-16!679;CL:0000004!3.18e-16!679;CL:0000255!3.18e-16!679;CL:0000012!2.78e-15!682;CL:0000055!4.43e-15!180;CL:0000222!3.24e-13!119;CL:0000057!5.30e-12!75;CL:0000220!5.80e-10!246;CL:0000063!9.30e-10!578;CL:0002321!2.32e-09!248;CL:0000003!5.77e-09!722;CL:0000183!1.09e-07!59;CL:0000192!2.87e-07!42;CL:0000514!2.87e-07!42;CL:0000680!3.01e-07!57;CL:0000056!3.01e-07!57;CL:0000355!3.01e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.48e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.79e-13,121;CL:0000057,1.98e-12,76;CL:0002321,1.77e-09,250;CL:0000192,2.87e-07,43;CL:0000514,2.87e-07,43;CL:0000680,2.89e-07,58;CL:0000056,2.89e-07,58;CL:0000355,2.89e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.12e-11!118;UBERON:0000926!2.17e-11!448;UBERON:0004120!2.17e-11!448;UBERON:0006603!2.17e-11!448;UBERON:0005256!2.77e-10!143;UBERON:0004872!3.20e-09!84;UBERON:0000055!4.83e-09!69;UBERON:0002049!6.52e-09!79;UBERON:0007798!6.52e-09!79;UBERON:0000486!1.02e-08!82;UBERON:0001009!1.29e-08!113;UBERON:0001981!1.53e-08!60;UBERON:0007500!1.53e-08!60;UBERON:0004537!1.53e-08!60;UBERON:0006965!1.53e-08!60;UBERON:0003102!2.70e-08!95;UBERON:0004535!5.24e-08!110;UBERON:0000467!6.99e-08!625;UBERON:0000480!7.80e-08!626;UBERON:0001637!9.28e-08!42;UBERON:0003509!9.28e-08!42;UBERON:0004572!9.28e-08!42;UBERON:0003081!1.32e-07!216;UBERON:0000914!2.64e-07!83;UBERON:0002329!2.64e-07!83;UBERON:0003077!2.64e-07!83;UBERON:0003059!2.64e-07!83;UBERON:0007282!2.64e-07!83;UBERON:0009618!2.64e-07!83;UBERON:0007285!2.64e-07!83;UBERON:0000490!5.08e-07!138;UBERON:0000468!5.37e-07!659;UBERON:0004290!8.12e-07!70;UBERON:0002100!9.09e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.17e-11,117;UBERON:0000926,9.41e-10,315;UBERON:0004120,9.41e-10,315;UBERON:0006603,9.41e-10,315;UBERON:0004872,8.16e-09,83;UBERON:0000486,9.49e-09,83;UBERON:0003102,1.03e-08,99;UBERON:0000055,1.23e-08,68;UBERON:0002049,1.59e-08,78;UBERON:0007798,1.59e-08,78;UBERON:0007503,2.04e-08,78;UBERON:0001009,2.82e-08,112;UBERON:0007500,3.97e-08,59;UBERON:0001981,3.97e-08,59;UBERON:0004537,3.97e-08,59;UBERON:0006965,3.97e-08,59;UBERON:0003104,4.31e-08,160;UBERON:0009142,4.31e-08,160;UBERON:0005256,7.92e-08,122;UBERON:0000490,8.82e-08,148;UBERON:0001637,9.27e-08,42;UBERON:0003509,9.27e-08,42;UBERON:0004572,9.27e-08,42;UBERON:0004535,1.12e-07,109;UBERON:0002329,7.61e-07,71;UBERON:0003059,7.61e-07,71;UBERON:0007282,7.61e-07,71;UBERON:0004290,7.61e-07,71;UBERON:0009618,7.61e-07,71 | |||
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| ||
|short_description=p2@CTSZ | |short_description=p2@CTSZ | ||
}} | }} |
Latest revision as of 07:17, 17 September 2015
Short description: | p2@CTSZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTSZ_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_NM_001336, uc002yai.2, uc002yaj.3_5end |
EntrezGene: | CTSZ |
HGNC: | 2547 |
UniProt: | Q9UBR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.79e-13 | 121 |
fibroblast | 1.98e-12 | 76 |
embryonic cell | 1.77e-09 | 250 |
smooth muscle cell | 2.87e-07 | 43 |
smooth muscle myoblast | 2.87e-07 | 43 |
muscle precursor cell | 2.89e-07 | 58 |
myoblast | 2.89e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.89e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.17e-11 | 117 |
mesoderm | 9.41e-10 | 315 |
mesoderm-derived structure | 9.41e-10 | 315 |
presumptive mesoderm | 9.41e-10 | 315 |
splanchnic layer of lateral plate mesoderm | 8.16e-09 | 83 |
multilaminar epithelium | 9.49e-09 | 83 |
surface structure | 1.03e-08 | 99 |
vessel | 1.23e-08 | 68 |
vasculature | 1.59e-08 | 78 |
vascular system | 1.59e-08 | 78 |
epithelial vesicle | 2.04e-08 | 78 |
circulatory system | 2.82e-08 | 112 |
epithelial tube open at both ends | 3.97e-08 | 59 |
blood vessel | 3.97e-08 | 59 |
blood vasculature | 3.97e-08 | 59 |
vascular cord | 3.97e-08 | 59 |
mesenchyme | 4.31e-08 | 160 |
entire embryonic mesenchyme | 4.31e-08 | 160 |
trunk mesenchyme | 7.92e-08 | 122 |
unilaminar epithelium | 8.82e-08 | 148 |
artery | 9.27e-08 | 42 |
arterial blood vessel | 9.27e-08 | 42 |
arterial system | 9.27e-08 | 42 |
cardiovascular system | 1.12e-07 | 109 |
somite | 7.61e-07 | 71 |
presomitic mesoderm | 7.61e-07 | 71 |
presumptive segmental plate | 7.61e-07 | 71 |
dermomyotome | 7.61e-07 | 71 |
trunk paraxial mesoderm | 7.61e-07 | 71 |