FFCP PHASE1:Hg19::chr5:176943630..176943646,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51428 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18674 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-305bp_to_ENST00000504781_5end | |||
|cluster_id=chr5:176943630..176943646,- | |||
|coexpression_cluster_id=C2471 | |||
|description=CAGE_peak_7_at_DDX41_5end | |||
|id=chr5:176943630..176943646,- | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-13!180;CL:0000359!3.04e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.39e-20;32!CL:0000192;2.59e-12;43!CL:0002539;6.27e-11;10!CL:0000187;3.75e-08;55!CL:0002596;3.26e-07;2!CL:0002589;4.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.72e-21,32;CL:0000192,1.09e-14,43;CL:0000514,1.09e-14,43;CL:0000680,5.58e-13,58;CL:0000056,5.58e-13,58;CL:0000355,5.58e-13,58;CL:0000187,3.00e-12,55;CL:0002539,4.72e-11,10;CL:0000393,1.25e-10,61;CL:0000211,1.25e-10,61;CL:0002596,2.18e-07,2;CL:0002589,4.06e-07,2;CL:0000222,6.80e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.59e-12;43!CL:0000355;4.34e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.86e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.42e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.93e-09!42;UBERON:0003509!1.93e-09!42;UBERON:0004572!1.93e-09!42;UBERON:0004573!8.53e-09!33;UBERON:0004571!8.53e-09!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.42e-14;33!UBERON:0004571;1.42e-14;33!UBERON:0004237;6.27e-11;10!UBERON:0004695;6.27e-11;10!UBERON:0002111;6.27e-11;10!UBERON:0004178;6.27e-11;10!UBERON:0001637;2.26e-10;42!UBERON:0003509;2.26e-10;42!UBERON:0004572;2.26e-10;42!UBERON:0007500;2.45e-07;56!UBERON:0001981;2.45e-07;56!UBERON:0004537;2.45e-07;56!UBERON:0005396;3.26e-07;2!UBERON:0001529;4.85e-07;2!UBERON:0007204;4.85e-07;2!UBERON:0001135;4.96e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,1.08e-17,33;UBERON:0004571,1.08e-17,33;UBERON:0001637,3.37e-17,42;UBERON:0003509,3.37e-17,42;UBERON:0004572,3.37e-17,42;UBERON:0004872,1.32e-12,83;UBERON:0007500,1.38e-12,59;UBERON:0001981,1.38e-12,59;UBERON:0004537,1.38e-12,59;UBERON:0006965,1.38e-12,59;UBERON:0001134,7.53e-12,62;UBERON:0002036,7.53e-12,62;UBERON:0003082,7.53e-12,62;UBERON:0000055,1.19e-11,68;UBERON:0002385,2.44e-11,64;UBERON:0001015,2.44e-11,64;UBERON:0000383,2.44e-11,64;UBERON:0004237,4.72e-11,10;UBERON:0004695,4.72e-11,10;UBERON:0002111,4.72e-11,10;UBERON:0004178,4.72e-11,10;UBERON:0002049,7.81e-11,78;UBERON:0007798,7.81e-11,78;UBERON:0003914,5.31e-10,117;UBERON:0002329,8.73e-10,71;UBERON:0003059,8.73e-10,71;UBERON:0007282,8.73e-10,71;UBERON:0004290,8.73e-10,71;UBERON:0009618,8.73e-10,71;UBERON:0003077,1.37e-09,72;UBERON:0007285,1.37e-09,72;UBERON:0007503,1.38e-09,78;UBERON:0007524,2.13e-09,73;UBERON:0004535,3.22e-09,109;UBERON:0001009,7.99e-09,112;UBERON:0000486,9.25e-09,83;UBERON:0005256,1.90e-08,122;UBERON:0005396,2.18e-07,2;UBERON:0001529,4.06e-07,2;UBERON:0007204,4.06e-07,2;UBERON:0001135,4.15e-07,15;UBERON:0000490,8.86e-07,148 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0,3.19454117451962,0.697801167972428,0,0,0.495065411840187,0,0,0,0,0,0.123121058076788,0,0.940364164434263,0,0.136874425072884,0,0.916960868975415,0.410502947249729,0.865818594450472,0,0,0,0,0,0,0,2.13253848731132,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,3.45228916977532,0,0.50133791063589,0.144846518960824,0,2.43317435151318,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,1.42306505074684,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0.25326102332916,1.45650098894541,0.286836620748814,0.354668382198357,1.68203280042692,3.20246987189115,0.98667019366864,0,0,0,0.302714855289863,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0.453728732640084,0.717558542755448,0.427114777637135,2.11931901159562,0,0.206105058476878,0,0.558350568994769,0.506328996723799,1.36411807225678,0.757301322732344,0.736399189138395,0.161646056818812,0.710019185033229,0.302256294682921,1.69560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0,3.25343040034651,2.07322110030741,2.77552935963191,0,0,0,0,0,0.721879481669586,0,0.337169380156203,0,0.330881918197182,0.435758888184812,0,0.134831308160164,0,0,0,2.80483547606892,0,0,0,0,0,0,0,2.74508496477641,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.463721619900307,0.352226082707465,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0.492663237895943,0,0,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0,0,0,0.22001485746285,0.129271715757778,0,0.845302752556,0,0,0,0,0,1.00084595560703,0.542621605391443,0,0,1.42156779497018,0,0.602878754119172,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.434343920002738,0.410952645100767,2.14873155887875,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.813795071099207,1.24782516918484,0.356857977594324,0.315404830067869,0.234282829985426,0.300946099727719,0,0,1.99267679560631,1.84369168541703,0.260650843404249,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0.920771839728375,0.280660094433074,0.768834895534206,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.410635780069046,0,0,0,2.20557117333613,0,0.114814448164607,0,0,0,0.924184045252977,0,0,0.633309773357254,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.27470839445503,0.247528499761764,0.574265537996172,0,4.82051789532479,0,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,1.14851441245126,0.10115778085555,3.253918845081,3.1481234683064,2.0911118104818,1.84820148105653,1.59691809095107,5.21959795245044,2.40921484835096,1.43124886741991,0,0,0,0,0,1.59101623962968,3.92474320099615,0.359744915166629,0.274537029736055,0,1.41527737101321,1.58510321173008,0,0,0.243713489631284,2.11300293513511,0,0.141405431953713,0,3.30819206127675,0.66343897524122,0.876901770507525,0,0,1.62328301570163,0.6196469961995,2.25356482025793,0,0,0.7133421029625,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.0962221127255121,0.670302275535787,2.17781969722645,0,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.355709216742071,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.540911356951966,0,0,0,0,0.36408156524854,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.329607748453519,0,0,0,0.503865495708552,0,0.615424027305347,7.46495010388338,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0.291604613383254,0.520874984799877,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,1.4124158349861,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0.182454789215666,0,0.728341138602278,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0.264768380074501,0.225980740780532,0.411125773940253,0,0.379864775735272,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0.203996435272644,0.288950589901519,0,0,1.27746588066972,0.859530882839914,1.31443677139657,0,0,0,0.199679000498991,0,0,0,0.720599767084807,0,0.0787831823072236,0.247247575143499,0.471824806979294,0.0984274815147488,0,0,0,0,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0,0.157363764404994,0.528001682597033,0.179287339332845,0,0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| |||
|short_description=p7@DDX41 | |||
}} |
Latest revision as of 07:13, 17 September 2015
Short description: | p7@DDX41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DDX41_5end |
Coexpression cluster: | C2471_basal_Smooth_mucinous_Chondrocyte_H9_Cardiac_Sertoli |
Association with transcript: | -305bp_to_ENST00000504781_5end |
EntrezGene: | DDX41 |
HGNC: | 18674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.72e-21 | 32 |
smooth muscle cell | 1.09e-14 | 43 |
smooth muscle myoblast | 1.09e-14 | 43 |
muscle precursor cell | 5.58e-13 | 58 |
myoblast | 5.58e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.58e-13 | 58 |
muscle cell | 3.00e-12 | 55 |
aortic smooth muscle cell | 4.72e-11 | 10 |
electrically responsive cell | 1.25e-10 | 61 |
electrically active cell | 1.25e-10 | 61 |
smooth muscle cell of the carotid artery | 2.18e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 4.06e-07 | 2 |
mesodermal cell | 6.80e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.42e-09 | 14 |