FFCP PHASE1:Hg19::chr5:176937747..176937759,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79930 | |EntrezGene=79930 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24583 | |HGNC=24583 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L591,E9PAT0 | |UniProt=Q7L591,E9PAT0 | ||
|association_with_transcript=-320bp_to_NM_001144875,NM_001144876,uc003mhi.3,uc003mhj.3_5end | |association_with_transcript=-320bp_to_NM_001144875,NM_001144876,uc003mhi.3,uc003mhj.3_5end | ||
|cluster_id=chr5:176937747..176937759,- | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_6_at_DOK3_5end | |description=CAGE_peak_6_at_DOK3_5end | ||
|id=chr5:176937747..176937759,- | |id=chr5:176937747..176937759,- | ||
|ontology_enrichment_celltype=CL:0002057!9.43e-83!42;CL:0000766!2.02e-77!76;CL:0000860!1.81e-76!45;CL:0002194!2.26e-68!63;CL:0000576!2.26e-68!63;CL:0000040!2.26e-68!63;CL:0000559!2.26e-68!63;CL:0002009!6.50e-66!65;CL:0000839!2.25e-60!70;CL:0000557!2.33e-59!71;CL:0000763!2.39e-59!112;CL:0000049!2.39e-59!112;CL:0000738!2.38e-56!140;CL:0000037!9.47e-52!172;CL:0000566!9.47e-52!172;CL:0002087!3.66e-51!119;CL:0002032!6.80e-49!165;CL:0000837!6.80e-49!165;CL:0000988!5.14e-48!182;CL:0002031!1.65e-42!124;CL:0002393!3.51e-22!9;CL:0002397!3.51e-22!9;CL:0000134!3.26e-17!358;CL:0000094!1.13e-16!8;CL:0002320!1.44e-16!365;CL:0000219!2.65e-14!390;CL:0000081!9.00e-12!11;CL:0000048!1.31e-11!430;CL:0000034!2.05e-11!444;CL:0000723!3.16e-11!436;CL:0000775!1.61e-09!3;CL:0000767!6.99e-09!3;CL:0000842!5.61e-08!3;CL:0000875!6.83e-08!3;CL:0002396!6.83e-08!3 | |ontology_enrichment_celltype=CL:0002057!9.43e-83!42;CL:0000766!2.02e-77!76;CL:0000860!1.81e-76!45;CL:0002194!2.26e-68!63;CL:0000576!2.26e-68!63;CL:0000040!2.26e-68!63;CL:0000559!2.26e-68!63;CL:0002009!6.50e-66!65;CL:0000839!2.25e-60!70;CL:0000557!2.33e-59!71;CL:0000763!2.39e-59!112;CL:0000049!2.39e-59!112;CL:0000738!2.38e-56!140;CL:0000037!9.47e-52!172;CL:0000566!9.47e-52!172;CL:0002087!3.66e-51!119;CL:0002032!6.80e-49!165;CL:0000837!6.80e-49!165;CL:0000988!5.14e-48!182;CL:0002031!1.65e-42!124;CL:0002393!3.51e-22!9;CL:0002397!3.51e-22!9;CL:0000134!3.26e-17!358;CL:0000094!1.13e-16!8;CL:0002320!1.44e-16!365;CL:0000219!2.65e-14!390;CL:0000081!9.00e-12!11;CL:0000048!1.31e-11!430;CL:0000034!2.05e-11!444;CL:0000723!3.16e-11!436;CL:0000775!1.61e-09!3;CL:0000767!6.99e-09!3;CL:0000842!5.61e-08!3;CL:0000875!6.83e-08!3;CL:0002396!6.83e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.13e-71;33!CL:0002057;3.13e-71;33!CL:0000473;3.29e-52;39!CL:0000234;3.29e-52;39!CL:0000576;2.28e-48;48!CL:0000766;1.95e-41;69!CL:0000094;3.56e-31;8!CL:0000081;1.98e-22;11!CL:0002393;6.26e-21;6!CL:0002397;6.26e-21;6!CL:0000763;6.11e-19;100!CL:0000775;7.35e-17;3!CL:0000767;8.53e-16;3!CL:0002087;2.82e-13;104!CL:0000738;5.95e-12;136!CL:0000988;5.32e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.27e-88,42;CL:0002057,1.27e-88,42;CL:0000766,1.68e-83,72;CL:0000473,2.08e-82,48;CL:0000234,2.08e-82,48;CL:0002194,1.07e-64,59;CL:0000576,1.07e-64,59;CL:0000040,1.07e-64,59;CL:0000559,1.07e-64,59;CL:0002009,2.07e-62,61;CL:0000839,2.73e-57,66;CL:0000557,2.34e-56,67;CL:0000763,1.17e-53,108;CL:0000049,1.17e-53,108;CL:0000738,1.40e-46,136;CL:0000037,2.00e-36,168;CL:0002032,5.35e-36,161;CL:0000837,5.35e-36,161;CL:0002087,2.39e-35,115;CL:0000988,3.18e-34,177;CL:0002031,3.35e-31,120;CL:0000094,3.65e-31,8;CL:0000081,2.02e-22,11;CL:0000775,6.46e-17,3;CL:0000767,1.10e-15,3;CL:0002393,5.86e-14,9;CL:0002397,5.86e-14,9;CL:0000134,1.53e-13,354;CL:0002320,3.88e-13,361;CL:0000219,1.04e-11,386;CL:0000034,2.97e-10,441;CL:0000048,5.83e-10,427;CL:0000723,1.02e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.29e-64;42!CL:0000049;2.01e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-57!102;UBERON:0003061!1.51e-57!102;UBERON:0002371!2.36e-51!80;UBERON:0002193!3.56e-51!112;UBERON:0001474!6.11e-47!86;UBERON:0004765!3.42e-38!101;UBERON:0001434!3.42e-38!101;UBERON:0002405!9.81e-34!115;UBERON:0003081!5.55e-23!216;UBERON:0002204!2.04e-18!167;UBERON:0002384!1.08e-15!375;UBERON:0000178!3.41e-09!15;UBERON:0000179!3.41e-09!15;UBERON:0000463!3.41e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!1.51e-57!102;UBERON:0003061!1.51e-57!102;UBERON:0002371!2.36e-51!80;UBERON:0002193!3.56e-51!112;UBERON:0001474!6.11e-47!86;UBERON:0004765!3.42e-38!101;UBERON:0001434!3.42e-38!101;UBERON:0002405!9.81e-34!115;UBERON:0003081!5.55e-23!216;UBERON:0002204!2.04e-18!167;UBERON:0002384!1.08e-15!375;UBERON:0000178!3.41e-09!15;UBERON:0000179!3.41e-09!15;UBERON:0000463!3.41e-09!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.81e-49,76;UBERON:0001474,4.76e-45,82;UBERON:0002390,1.65e-42,98;UBERON:0003061,1.65e-42,98;UBERON:0004765,1.53e-40,90;UBERON:0002405,4.77e-39,93;UBERON:0002193,5.18e-38,108;UBERON:0001434,6.56e-36,100;UBERON:0002204,4.33e-19,167;UBERON:0003081,2.91e-17,203;UBERON:0002384,1.38e-12,371;UBERON:0000926,8.02e-09,315;UBERON:0004120,8.02e-09,315;UBERON:0006603,8.02e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.15148819429164,2.32224184974114,0,0,0,0,0,0,1.66198622559563,5.81578897663411,5.4252717678963,0,0.32389366601898,0.257575567634187,2.03557534291391,0,0.970336244751265,2.78914844286822,3.28934310417461,4.33588919253145,0,1.5369642391746,1.18241114944293,2.06847408441971,0,6.77132432971709,2.82363509313907,2.45615535052061,0.674170453335254,2.44867113896722,1.28371610830437,5.11469700639233,0.329851300186716,0.598390972864896,0.852449501065388,5.22376629531451,3.40431134814684,3.73693349397345,1.50749199154046,0,2.17188844705117,2.42159801053347,1.47311054395026,1.58231193720442,1.05627643155971,0.850417199860174,1.46761051855863,2.2465726229299,0.750884464207532,1.12507910687956,0.570025487482497,0.59675003159727,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,5.24304916763028,5.9832291840805,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.15714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.15148819429164,2.32224184974114,0,0,0,0,0,0,1.66198622559563,5.81578897663411,5.4252717678963,0,0.32389366601898,0.257575567634187,2.03557534291391,0,0.970336244751265,2.78914844286822,3.28934310417461,4.33588919253145,0,1.5369642391746,1.18241114944293,2.06847408441971,0,6.77132432971709,2.82363509313907,2.45615535052061,0.674170453335254,2.44867113896722,1.28371610830437,5.11469700639233,0.329851300186716,0.598390972864896,0.852449501065388,5.22376629531451,3.40431134814684,3.73693349397345,1.50749199154046,0,2.17188844705117,2.42159801053347,1.47311054395026,1.58231193720442,1.05627643155971,0.850417199860174,1.46761051855863,2.2465726229299,0.750884464207532,1.12507910687956,0.570025487482497,0.59675003159727,0.730656615058536,0,0,0,0,0,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,5.24304916763028,5.9832291840805,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.15714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@DOK3 | |short_description=p6@DOK3 | ||
}} | }} |
Latest revision as of 07:09, 17 September 2015
Short description: | p6@DOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DOK3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -320bp_to_NM_001144875, NM_001144876, uc003mhi.3, uc003mhj.3_5end |
EntrezGene: | DOK3 |
HGNC: | 24583 |
UniProt: | Q7L591E9PAT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.81e-49 | 76 |
bone element | 4.76e-45 | 82 |
hematopoietic system | 1.65e-42 | 98 |
blood island | 1.65e-42 | 98 |
skeletal element | 1.53e-40 | 90 |
immune system | 4.77e-39 | 93 |
hemolymphoid system | 5.18e-38 | 108 |
skeletal system | 6.56e-36 | 100 |
musculoskeletal system | 4.33e-19 | 167 |
lateral plate mesoderm | 2.91e-17 | 203 |
connective tissue | 1.38e-12 | 371 |
mesoderm | 8.02e-09 | 315 |
mesoderm-derived structure | 8.02e-09 | 315 |
presumptive mesoderm | 8.02e-09 | 315 |