FFCP PHASE1:Hg19::chr3:187463179..187463201,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:187463179..187463201,-
|short_description=p2@BCL6
|description=CAGE_peak_2_at_BCL6_5end
|association_with_transcript=23bp_to_ENST00000480458_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=604 | |EntrezGene=604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1001 | |HGNC=1001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000480458_5end | |||
|cluster_id=chr3:187463179..187463201,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_BCL6_5end | |||
|id=chr3:187463179..187463201,- | |||
|ontology_enrichment_celltype=CL:0002057!2.86e-18!42;CL:0000860!4.66e-16!45;CL:0000766!6.78e-15!76;CL:0002009!8.51e-13!65;CL:0002194!2.26e-12!63;CL:0000576!2.26e-12!63;CL:0000040!2.26e-12!63;CL:0000559!2.26e-12!63;CL:0000839!6.82e-12!70;CL:0000557!5.48e-11!71;CL:0000738!1.30e-10!140;CL:0002087!3.03e-09!119;CL:0002031!3.80e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-13;33!CL:0002057;1.57e-13;33!CL:0000473;1.66e-11;39!CL:0000234;1.66e-11;39!CL:0000576;2.27e-09;48!CL:0000766;8.13e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-18,42;CL:0002057,1.32e-18,42;CL:0000473,4.68e-18,48;CL:0000234,4.68e-18,48;CL:0000766,7.45e-17,72;CL:0002009,8.89e-15,61;CL:0002194,2.43e-14,59;CL:0000576,2.43e-14,59;CL:0000040,2.43e-14,59;CL:0000559,2.43e-14,59;CL:0000839,1.30e-13,66;CL:0000557,1.03e-12,67;CL:0000738,2.90e-12,136;CL:0002087,6.33e-11,115;CL:0002031,1.06e-10,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-36!115;UBERON:0002390!1.50e-15!102;UBERON:0003061!1.50e-15!102;UBERON:0002193!5.55e-14!112;UBERON:0001049!2.15e-13!57;UBERON:0005068!2.15e-13!57;UBERON:0006241!2.15e-13!57;UBERON:0007135!2.15e-13!57;UBERON:0002616!1.29e-12!59;UBERON:0001017!5.09e-10!82;UBERON:0003080!1.07e-09!42;UBERON:0000955!1.20e-09!69;UBERON:0006238!1.20e-09!69;UBERON:0005743!1.22e-09!86;UBERON:0002371!2.88e-09!80;UBERON:0003075!3.03e-09!86;UBERON:0007284!3.03e-09!86;UBERON:0002780!3.56e-09!41;UBERON:0001890!3.56e-09!41;UBERON:0006240!3.56e-09!41;UBERON:0002405!3.61e-09!115;UBERON:0000178!9.69e-09!15;UBERON:0000179!9.69e-09!15;UBERON:0000463!9.69e-09!15;UBERON:0002346!1.81e-08!90;UBERON:0000073!1.97e-08!94;UBERON:0001016!1.97e-08!94;UBERON:0002020!8.97e-08!34;UBERON:0003528!8.97e-08!34;UBERON:0001474!1.29e-07!86;UBERON:0002791!4.63e-07!33;UBERON:0001893!5.28e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.16e-09;114!UBERON:0000178;7.10e-09;15!UBERON:0000179;7.10e-09;15!UBERON:0000463;7.10e-09;15!UBERON:0000073;1.78e-07;53!UBERON:0002616;1.78e-07;53!UBERON:0003528;3.88e-07;34!UBERON:0002020;3.88e-07;34!UBERON:0002780;7.01e-07;41!UBERON:0001890;7.01e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.85e-36,114;UBERON:0002390,1.05e-17,98;UBERON:0003061,1.05e-17,98;UBERON:0002193,1.43e-15,108;UBERON:0001049,4.63e-13,56;UBERON:0005068,4.63e-13,56;UBERON:0006241,4.63e-13,56;UBERON:0007135,4.63e-13,56;UBERON:0000073,6.11e-12,53;UBERON:0002616,6.11e-12,53;UBERON:0002371,6.84e-11,76;UBERON:0002405,7.43e-10,93;UBERON:0003075,9.97e-10,82;UBERON:0007284,9.97e-10,82;UBERON:0001017,1.13e-09,81;UBERON:0000955,2.26e-09,68;UBERON:0006238,2.26e-09,68;UBERON:0002780,2.60e-09,41;UBERON:0001890,2.60e-09,41;UBERON:0003080,2.60e-09,41;UBERON:0006240,2.60e-09,41;UBERON:0000178,6.95e-09,15;UBERON:0000179,6.95e-09,15;UBERON:0000463,6.95e-09,15;UBERON:0001474,7.15e-09,82;UBERON:0002346,7.20e-09,86;UBERON:0004765,8.36e-09,90;UBERON:0001016,1.30e-08,89;UBERON:0003528,6.99e-08,34;UBERON:0002020,6.99e-08,34;UBERON:0001434,1.54e-07,100;UBERON:0000479,1.55e-07,773;UBERON:0001893,4.25e-07,34;UBERON:0002791,6.45e-07,32 | |||
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| ||
|short_description=p2@BCL6 | |||
}} | }} |
Latest revision as of 07:04, 17 September 2015
Short description: | p2@BCL6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCL6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 23bp_to_ENST00000480458_5end |
EntrezGene: | BCL6 |
HGNC: | 1001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.32e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-18 | 42 |
defensive cell | 4.68e-18 | 48 |
phagocyte | 4.68e-18 | 48 |
myeloid leukocyte | 7.45e-17 | 72 |
macrophage dendritic cell progenitor | 8.89e-15 | 61 |
monopoietic cell | 2.43e-14 | 59 |
monocyte | 2.43e-14 | 59 |
monoblast | 2.43e-14 | 59 |
promonocyte | 2.43e-14 | 59 |
myeloid lineage restricted progenitor cell | 1.30e-13 | 66 |
granulocyte monocyte progenitor cell | 1.03e-12 | 67 |
leukocyte | 2.90e-12 | 136 |
nongranular leukocyte | 6.33e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.06e-10 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.85e-36 | 114 |
hematopoietic system | 1.05e-17 | 98 |
blood island | 1.05e-17 | 98 |
hemolymphoid system | 1.43e-15 | 108 |
neural tube | 4.63e-13 | 56 |
neural rod | 4.63e-13 | 56 |
future spinal cord | 4.63e-13 | 56 |
neural keel | 4.63e-13 | 56 |
regional part of nervous system | 6.11e-12 | 53 |
regional part of brain | 6.11e-12 | 53 |
bone marrow | 6.84e-11 | 76 |
immune system | 7.43e-10 | 93 |
neural plate | 9.97e-10 | 82 |
presumptive neural plate | 9.97e-10 | 82 |
central nervous system | 1.13e-09 | 81 |
brain | 2.26e-09 | 68 |
future brain | 2.26e-09 | 68 |
regional part of forebrain | 2.60e-09 | 41 |
forebrain | 2.60e-09 | 41 |
anterior neural tube | 2.60e-09 | 41 |
future forebrain | 2.60e-09 | 41 |
blood | 6.95e-09 | 15 |
haemolymphatic fluid | 6.95e-09 | 15 |
organism substance | 6.95e-09 | 15 |
bone element | 7.15e-09 | 82 |
neurectoderm | 7.20e-09 | 86 |
skeletal element | 8.36e-09 | 90 |
nervous system | 1.30e-08 | 89 |
brain grey matter | 6.99e-08 | 34 |
gray matter | 6.99e-08 | 34 |
skeletal system | 1.54e-07 | 100 |
tissue | 1.55e-07 | 773 |
telencephalon | 4.25e-07 | 34 |
regional part of telencephalon | 6.45e-07 | 32 |