FFCP PHASE1:Hg19::chr19:33793430..33793447,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:33793430..33793447,- to FFCP PHASE1:Hg19::chr19:33793430..33793447,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1050 | |EntrezGene=1050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1833 | |HGNC=1833 | ||
|TSSclassifier=strong | |||
|UniProt=P49715 | |UniProt=P49715 | ||
|association_with_transcript=0bp_to_ENST00000425420,NM_004364,uc002nun.2_5end | |||
|cluster_id=chr19:33793430..33793447,- | |||
|description=CAGE_peak_1_at_CEBPA_5end | |||
|id=chr19:33793430..33793447,- | |||
|ontology_enrichment_celltype=CL:0000763!6.07e-29!112;CL:0000049!6.07e-29!112;CL:0002009!6.75e-25!65;CL:0002194!1.66e-24!63;CL:0000576!1.66e-24!63;CL:0000040!1.66e-24!63;CL:0000559!1.66e-24!63;CL:0000766!1.36e-23!76;CL:0000557!3.57e-22!71;CL:0000839!6.79e-21!70;CL:0002057!7.24e-20!42;CL:0000860!5.00e-19!45;CL:0000037!6.44e-17!172;CL:0000566!6.44e-17!172;CL:0002032!3.24e-16!165;CL:0000837!3.24e-16!165;CL:0000988!3.83e-15!182;CL:0000738!2.45e-11!140;CL:0002087!7.21e-11!119;CL:0002031!1.61e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.65e-16;48!CL:0000473;2.30e-15;39!CL:0000234;2.30e-15;39!CL:0000860;5.90e-15;33!CL:0002057;5.90e-15;33!CL:0000766;2.60e-11;69!CL:0000763;1.79e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.34e-31,108;CL:0000049,7.34e-31,108;CL:0002009,1.56e-27,61;CL:0002194,3.78e-27,59;CL:0000576,3.78e-27,59;CL:0000040,3.78e-27,59;CL:0000559,3.78e-27,59;CL:0000766,6.26e-26,72;CL:0000557,1.90e-24,67;CL:0000473,3.06e-24,48;CL:0000234,3.06e-24,48;CL:0000839,4.80e-23,66;CL:0000860,7.44e-21,42;CL:0002057,7.44e-21,42;CL:0000037,4.31e-17,168;CL:0002032,2.97e-16,161;CL:0000837,2.97e-16,161;CL:0000988,9.07e-16,177;CL:0000738,1.55e-11,136;CL:0002087,6.40e-11,115;CL:0002031,1.25e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-15;42!CL:0000049;5.88e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!3.11e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.87e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.65e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-20!102;UBERON:0003061!1.51e-20!102;UBERON:0007023!4.88e-19!115;UBERON:0002371!2.93e-18!80;UBERON:0001474!4.40e-17!86;UBERON:0002193!2.05e-16!112;UBERON:0002405!5.29e-14!115;UBERON:0004765!7.66e-12!101;UBERON:0001434!7.66e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.58e-22,98;UBERON:0003061,4.58e-22,98;UBERON:0007023,4.71e-20,114;UBERON:0002371,7.08e-20,76;UBERON:0001474,3.45e-18,82;UBERON:0002193,7.78e-18,108;UBERON:0002405,1.33e-14,93;UBERON:0004765,6.53e-14,90;UBERON:0001434,1.07e-11,100 | |||
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| ||
|short_description=p1@CEBPA | |||
}} | }} |
Latest revision as of 06:46, 17 September 2015
Short description: | p1@CEBPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEBPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000425420, NM_004364, uc002nun.2_5end |
EntrezGene: | CEBPA |
HGNC: | 1833 |
UniProt: | P49715 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.34e-31 | 108 |
common myeloid progenitor | 7.34e-31 | 108 |
macrophage dendritic cell progenitor | 1.56e-27 | 61 |
monopoietic cell | 3.78e-27 | 59 |
monocyte | 3.78e-27 | 59 |
monoblast | 3.78e-27 | 59 |
promonocyte | 3.78e-27 | 59 |
myeloid leukocyte | 6.26e-26 | 72 |
granulocyte monocyte progenitor cell | 1.90e-24 | 67 |
defensive cell | 3.06e-24 | 48 |
phagocyte | 3.06e-24 | 48 |
myeloid lineage restricted progenitor cell | 4.80e-23 | 66 |
classical monocyte | 7.44e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.44e-21 | 42 |
hematopoietic stem cell | 4.31e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.97e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.97e-16 | 161 |
hematopoietic cell | 9.07e-16 | 177 |
leukocyte | 1.55e-11 | 136 |
nongranular leukocyte | 6.40e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.25e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.58e-22 | 98 |
blood island | 4.58e-22 | 98 |
adult organism | 4.71e-20 | 114 |
bone marrow | 7.08e-20 | 76 |
bone element | 3.45e-18 | 82 |
hemolymphoid system | 7.78e-18 | 108 |
immune system | 1.33e-14 | 93 |
skeletal element | 6.53e-14 | 90 |
skeletal system | 1.07e-11 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.65e-07 | 31 |