FFCP PHASE1:Hg19::chr8:18711866..18711911,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:18711866..18711911,-
|short_description=p9@PSD3
|description=CAGE_peak_9_at_PSD3_5end
|association_with_transcript=0bp_to_ENST00000519851_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23362 | |EntrezGene=23362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19093 | |HGNC=19093 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJE4 | |UniProt=E5RJE4 | ||
|association_with_transcript=0bp_to_ENST00000519851_5end | |||
|cluster_id=chr8:18711866..18711911,- | |||
|description=CAGE_peak_9_at_PSD3_5end | |||
|id=chr8:18711866..18711911,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.13e-31!115;UBERON:0001049!5.55e-18!57;UBERON:0005068!5.55e-18!57;UBERON:0006241!5.55e-18!57;UBERON:0007135!5.55e-18!57;UBERON:0002616!1.04e-17!59;UBERON:0003075!1.87e-17!86;UBERON:0007284!1.87e-17!86;UBERON:0002346!4.78e-17!90;UBERON:0001017!7.63e-17!82;UBERON:0005743!1.40e-16!86;UBERON:0002780!1.85e-16!41;UBERON:0001890!1.85e-16!41;UBERON:0006240!1.85e-16!41;UBERON:0000955!2.68e-16!69;UBERON:0006238!2.68e-16!69;UBERON:0003080!1.07e-15!42;UBERON:0000073!3.27e-14!94;UBERON:0001016!3.27e-14!94;UBERON:0003056!4.86e-14!61;UBERON:0001893!4.72e-13!34;UBERON:0002020!1.06e-12!34;UBERON:0003528!1.06e-12!34;UBERON:0002791!1.64e-12!33;UBERON:0001869!1.14e-11!32;UBERON:0000153!2.96e-11!129;UBERON:0007811!2.96e-11!129;UBERON:0000033!1.15e-10!123;UBERON:0000956!5.69e-10!25;UBERON:0000203!5.69e-10!25;UBERON:0002619!5.60e-09!22;UBERON:0000062!2.00e-08!511;UBERON:0004121!2.02e-08!169;UBERON:0000924!2.08e-08!173;UBERON:0006601!2.08e-08!173;UBERON:0001950!2.87e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.34e-11;41!UBERON:0001890;5.34e-11;41!UBERON:0001893;1.90e-09;34!UBERON:0003528;9.72e-09;34!UBERON:0002020;9.72e-09;34!UBERON:0007023;1.12e-08;114!UBERON:0000073;1.70e-08;53!UBERON:0002616;1.70e-08;53!UBERON:0001869;2.70e-08;32!UBERON:0002791;2.83e-08;32!UBERON:0002619;8.14e-08;22!UBERON:0000956;1.39e-07;25!UBERON:0000203;1.39e-07;25!UBERON:0001950;1.94e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.40e-29,114;UBERON:0003075,1.36e-20,82;UBERON:0007284,1.36e-20,82;UBERON:0002346,3.49e-20,86;UBERON:0001049,5.23e-18,56;UBERON:0005068,5.23e-18,56;UBERON:0006241,5.23e-18,56;UBERON:0007135,5.23e-18,56;UBERON:0010314,8.86e-16,132;UBERON:0003056,1.06e-15,61;UBERON:0000073,2.25e-15,53;UBERON:0002616,2.25e-15,53;UBERON:0010371,2.62e-15,104;UBERON:0002780,9.24e-15,41;UBERON:0001890,9.24e-15,41;UBERON:0003080,9.24e-15,41;UBERON:0006240,9.24e-15,41;UBERON:0001017,1.88e-14,81;UBERON:0001016,7.23e-13,89;UBERON:0000955,1.22e-12,68;UBERON:0006238,1.22e-12,68;UBERON:0001893,2.11e-11,34;UBERON:0003528,5.76e-11,34;UBERON:0002020,5.76e-11,34;UBERON:0004121,9.63e-10,171;UBERON:0000924,9.63e-10,171;UBERON:0006601,9.63e-10,171;UBERON:0002791,1.21e-09,32;UBERON:0001869,1.77e-09,32;UBERON:0002619,5.50e-08,22;UBERON:0000956,9.81e-08,25;UBERON:0000203,9.81e-08,25;UBERON:0001950,1.24e-07,20 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.845726424575827,1.0007329835313,1.34088328328186,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.85870796139317,0.547497700291537,1.38096903554283,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0,0.223915474239924,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,1.13477044938228,1.24564449799115,0,0,0,0.605399502633369,0.736555271975129,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0.50133791063589,0,0.795285947051099,0,4.15953195521899,2.88248216701333,1.66886092816939,2.35762335895883,0,0,0.649094787309367,1.21890816109487,2.12732736830184,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0.397227542439656,3.72887606973458,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0.538842688278752,0.326923806226917,0.605429710579726,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.368502951935304,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0.340296549480063,0.358779271377724,0.213557388818567,0,0,0,0.515281080091258,0.558350568994769,0.675105328965065,0.68205903612839,0.504867548488229,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,1.39116485970092,1.29149563659404,0,0,0,0,0,0.738651018262192,11.2322047266834,4.7561971932393,0,0,0,0,0,0,0,0,0,0,0.12624243342638,1.90493682876507,1.90994212779139,1.17217447210047,0,0.719792448923265,0,0.285826432630578,0.560655421726804,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0,1.04007436911366,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.904318131178758,0,1.89948683245908,1.2162378064119,0,4.21667878966063,0.718874566474748,0,0,0.579125226670317,0,0.358121926479791,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0,0,0.535286966391485,0.157702415033935,0.35142424497814,0.601892199455438,4.5481500811197,0,0.664225598535437,0.368738337083406,0,1.17480694477644,0.343143423810856,0,0,0.213455115606889,0,0,0.907170879989041,0.248107807818777,1.53461973288062,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,1.03333003348146,0.546273504020151,1.18011973463482,0,0,0,0,0.105551628892876,1.13733384070897,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.515205058238611,2.93022287418699,3.30037999682352,0,0,0,1.45006077438183,0.154048617114644,0.614014698904518,0.275673144969061,0.214840489736547,0,0.340906509664404,2.75999310504886,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0.869932992075073,0,0.715624433709956,1.48863347743867,1.58189712359363,0.190630193923825,0,0.855877976067841,0.318203247925937,0,0.899362287916574,1.37268514868027,0.235624804691373,0,0,0.421258456238981,0,0.243713489631284,0,0.409499734223957,0.565621727814851,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98092366383228,0,3.37964840739304,2.46043718681657,1.50164227540718,0,0.278406173895242,0,3.78637949866376,0,0,0,1.17206543417515,0,0,0,0,0.890894042497916,0.921482106297696,0.994147647766298,0.984685914873589,0,0,0,4.5827037297746,1.65770349318689,0,0,0.246169610922139,0,0,0,0,1.57829449019094,0,0,0.969332746095218,3.33965153382665,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0,0.886642856860642,1.09692698576986,0.544692317594951,0,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,2.98578579323551,0.884575645033392,1.22206028986725,7.11650708833493,4.69542967996711,2.61054873763638,5.45949177143484,4.01288823649394,2.57690890297873,0,0,0,1.18375320854817,1.20990716048664,0.30607276163049,2.14834370736859,2.40517471063188,0.103688191397247,0,0,0,0,0,3.46686682532847,0,0,0,1.04836000945218,0,0,0,0,0.969890164884194,0.0882561266915003,2.71176888936639,0,1.19228767021794,3.22885059374981,0,0,1.06726497369676,0,0,0,0.171594997861965,0,0.248505071130865,0,0,0.523014231561666,0,0.866851769704557,1.80126086612937,2.60120219894787,0,0.429765441419957,1.05154941711726,9.21631924198439,9.16641696046735,1.43574604915363,3.19486400798386,9.87219910714113,1.56220020209311,28.7545262243188,1.80149941771202,0,0,0,0,0,9.99145318376257,2.38568906942791,0.408610218334727,0,0,0,13.948381276193,0,1.33649024647654,0,0.630445658393585,1.73100140845494,0,0,0,1.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| ||
|short_description=p9@PSD3 | |||
}} | }} |
Latest revision as of 06:41, 17 September 2015
Short description: | p9@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PSD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000519851_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RJE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.40e-29 | 114 |
neural plate | 1.36e-20 | 82 |
presumptive neural plate | 1.36e-20 | 82 |
neurectoderm | 3.49e-20 | 86 |
neural tube | 5.23e-18 | 56 |
neural rod | 5.23e-18 | 56 |
future spinal cord | 5.23e-18 | 56 |
neural keel | 5.23e-18 | 56 |
structure with developmental contribution from neural crest | 8.86e-16 | 132 |
pre-chordal neural plate | 1.06e-15 | 61 |
regional part of nervous system | 2.25e-15 | 53 |
regional part of brain | 2.25e-15 | 53 |
ecto-epithelium | 2.62e-15 | 104 |
regional part of forebrain | 9.24e-15 | 41 |
forebrain | 9.24e-15 | 41 |
anterior neural tube | 9.24e-15 | 41 |
future forebrain | 9.24e-15 | 41 |
central nervous system | 1.88e-14 | 81 |
nervous system | 7.23e-13 | 89 |
brain | 1.22e-12 | 68 |
future brain | 1.22e-12 | 68 |
telencephalon | 2.11e-11 | 34 |
brain grey matter | 5.76e-11 | 34 |
gray matter | 5.76e-11 | 34 |
ectoderm-derived structure | 9.63e-10 | 171 |
ectoderm | 9.63e-10 | 171 |
presumptive ectoderm | 9.63e-10 | 171 |
regional part of telencephalon | 1.21e-09 | 32 |
cerebral hemisphere | 1.77e-09 | 32 |
regional part of cerebral cortex | 5.50e-08 | 22 |
cerebral cortex | 9.81e-08 | 25 |
pallium | 9.81e-08 | 25 |
neocortex | 1.24e-07 | 20 |