FFCP PHASE2:Hg19::chr3:187086155..187086211,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64108 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:23992 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=23992 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96DX8 | ||
|association_with_transcript=0bp_to_NM_022147,uc003frm.2_5end | |association_with_transcript=0bp_to_NM_022147,uc003frm.2_5end | ||
|cluster_id=chr3:187086155..187086211,+ | |cluster_id=chr3:187086155..187086211,+ | ||
Latest revision as of 06:34, 17 September 2015
| Short description: | p1@RTP4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RTP4_5end |
| Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
| Association with transcript: | 0bp_to_NM_022147, uc003frm.2_5end |
| EntrezGene: | RTP4 |
| HGNC: | 23992 |
| UniProt: | Q96DX8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@RTP4 |
|---|
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125
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nongranular leukocyte | 1.25e-37 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.68e-35 | 120 |
| leukocyte | 3.35e-31 | 136 |
| hematopoietic oligopotent progenitor cell | 1.32e-24 | 161 |
| hematopoietic multipotent progenitor cell | 1.32e-24 | 161 |
| hematopoietic stem cell | 3.99e-24 | 168 |
| monopoietic cell | 2.36e-22 | 59 |
| monocyte | 2.36e-22 | 59 |
| monoblast | 2.36e-22 | 59 |
| promonocyte | 2.36e-22 | 59 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.13e-27 | 98 |
| blood island | 4.13e-27 | 98 |
| hemolymphoid system | 3.20e-26 | 108 |
| immune system | 4.12e-21 | 93 |
| bone marrow | 9.15e-19 | 76 |
| bone element | 2.63e-15 | 82 |
| skeletal element | 6.29e-13 | 90 |
| skeletal system | 1.68e-12 | 100 |
| adult organism | 2.84e-07 | 114 |
Showing 1 to 9 of 9 entries
