FFCP PHASE1:Hg19::chr19:3366429..3366439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4782 | |EntrezGene=4782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7786 | |HGNC=7786 | ||
|TSSclassifier=strong | |||
|UniProt=P08651 | |UniProt=P08651 | ||
|association_with_transcript=-125bp_to_NM_001245002,NM_001245004,NM_005597_5end | |association_with_transcript=-125bp_to_NM_001245002,NM_001245004,NM_005597_5end | ||
|cluster_id=chr19:3366429..3366439,+ | |||
|description=CAGE_peak_16_at_NFIC_5end | |description=CAGE_peak_16_at_NFIC_5end | ||
|id=chr19:3366429..3366439,+ | |id=chr19:3366429..3366439,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.56e-21;13!CL:0002567;5.37e-16;3!CL:0002591;2.07e-12;1!CL:0002549;7.82e-07;2 | |ontology_enrichment_celltype_v019=CL:0000136;2.56e-21;13!CL:0002567;5.37e-16;3!CL:0002591;2.07e-12;1!CL:0002549;7.82e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.35e-18,15;CL:0002567,4.30e-16,3;CL:0002591,3.45e-12,1;CL:0002549,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;7.82e-07;2 | |ontology_enrichment_disease_v019=DOID:3307;7.82e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,5.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-14!115;UBERON:0001017!1.01e-10!82;UBERON:0005743!2.09e-10!86;UBERON:0000073!3.46e-10!94;UBERON:0001016!3.46e-10!94;UBERON:0001049!5.72e-10!57;UBERON:0005068!5.72e-10!57;UBERON:0006241!5.72e-10!57;UBERON:0007135!5.72e-10!57;UBERON:0000955!1.08e-09!69;UBERON:0006238!1.08e-09!69;UBERON:0002346!2.74e-09!90;UBERON:0002616!1.19e-08!59;UBERON:0003075!2.68e-08!86;UBERON:0007284!2.68e-08!86;UBERON:0000477!6.26e-08!286;UBERON:0000924!8.19e-08!173;UBERON:0006601!8.19e-08!173;UBERON:0000153!1.96e-07!129;UBERON:0007811!1.96e-07!129;UBERON:0004111!1.97e-07!241;UBERON:0004121!4.83e-07!169;UBERON:0000033!4.85e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!2.45e-14!115;UBERON:0001017!1.01e-10!82;UBERON:0005743!2.09e-10!86;UBERON:0000073!3.46e-10!94;UBERON:0001016!3.46e-10!94;UBERON:0001049!5.72e-10!57;UBERON:0005068!5.72e-10!57;UBERON:0006241!5.72e-10!57;UBERON:0007135!5.72e-10!57;UBERON:0000955!1.08e-09!69;UBERON:0006238!1.08e-09!69;UBERON:0002346!2.74e-09!90;UBERON:0002616!1.19e-08!59;UBERON:0003075!2.68e-08!86;UBERON:0007284!2.68e-08!86;UBERON:0000477!6.26e-08!286;UBERON:0000924!8.19e-08!173;UBERON:0006601!8.19e-08!173;UBERON:0000153!1.96e-07!129;UBERON:0007811!1.96e-07!129;UBERON:0004111!1.97e-07!241;UBERON:0004121!4.83e-07!169;UBERON:0000033!4.85e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;7.82e-07;2!UBERON:0000078;7.82e-07;2!UBERON:0005358;7.82e-07;2!UBERON:0001886;7.82e-07;2!UBERON:0002012;7.82e-07;2!UBERON:0004086;7.82e-07;2!UBERON:0008886;7.82e-07;2!UBERON:0005282;7.82e-07;2!UBERON:0005281;7.82e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005629;7.82e-07;2!UBERON:0000078;7.82e-07;2!UBERON:0005358;7.82e-07;2!UBERON:0001886;7.82e-07;2!UBERON:0002012;7.82e-07;2!UBERON:0004086;7.82e-07;2!UBERON:0008886;7.82e-07;2!UBERON:0005282;7.82e-07;2!UBERON:0005281;7.82e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,9.54e-07,2;UBERON:0005358,9.54e-07,2;UBERON:0001886,9.54e-07,2;UBERON:0004086,9.54e-07,2;UBERON:0005282,9.54e-07,2;UBERON:0005281,9.54e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,1.30592814099919,0,0,0,0,0.123766352960047,0,0,1.80808358407193,0,0,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0.454072282934794,1.15235184896,0.468642863667593,0,0,0,0,0,0,0,0.245668634623536,0.413303124703062,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.484938170456436,0,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34434894420094,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.855877976067841,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.92947049429925,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0.398495976502139,0,0,0.20453736500431,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.241192877250816,0,0.774054819518572,0.591095237907095,0,0.10893846351899,0,1.00035336054936,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,1.33902874465124,0.470284307407084,0,0,0,0,0,0.196854963029498,0,0,0.272406812223151,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0.439656701034247,0,0.129282956361551,0,0,0,0.427149650270779,0.157204305099666,0.414239055347196,0,0,0,0,2.72008901684737,1.5041393641362,1.83807346058077,1.63936315354902,0,0.886068179966986,0.244052529803926,0.250381861413,0,0.110929051536852,0.310482014706917,0.415045904808692,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.553033744606923,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0.109209638192014,0.169732529954025,0.212574920101683,0.371807292777007,0,0.636008701306837,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.345786262321089,0,0,0,0.11796972334774,0,0,0,0,0,1.72983755203292,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0.222462803784138,0.156986185701028,0,0,0,0,0,0.285906176706625,0.316027223465453,0.813689977576877,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,1.1598144313382,0,0.233939463462106,0.397901550322736,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,1.6906229103336,0.169927114687817,0.0939839179798536,0.322289439867886,0,0,0,0.0802413666891683,0,0,0.143339583151451,0.473314686579554,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.2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| ||
|short_description=p16@NFIC | |short_description=p16@NFIC | ||
}} | }} |
Latest revision as of 06:32, 17 September 2015
Short description: | p16@NFIC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NFIC_5end |
Coexpression cluster: | NA |
Association with transcript: | -125bp_to_NM_001245002, NM_001245004, NM_005597_5end |
EntrezGene: | NFIC |
HGNC: | 7786 |
UniProt: | P08651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.35e-18 | 15 |
light melanocyte | 4.30e-16 | 3 |
smooth muscle cell of the pulmonary artery | 3.45e-12 | 1 |
fibroblast of choroid plexus | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 9.54e-07 | 2 |
ventricle of nervous system | 9.54e-07 | 2 |
choroid plexus | 9.54e-07 | 2 |
brain ventricle | 9.54e-07 | 2 |
ventricular system of brain | 9.54e-07 | 2 |
ventricular system of central nervous system | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.11e-07 | 2 |