FFCP PHASE1:Hg19::chr1:153585634..153585651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140576 | |EntrezGene=140576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20441 | |HGNC=20441 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FQ6 | |UniProt=Q96FQ6 | ||
|association_with_transcript=0bp_to_ENST00000368706_5end | |association_with_transcript=0bp_to_ENST00000368706_5end | ||
|cluster_id=chr1:153585634..153585651,- | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_7_at_S100A16_5end | |description=CAGE_peak_7_at_S100A16_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.94e-42!254;CL:0002321!6.46e-25!248;CL:0000220!9.61e-25!246;CL:0002076!5.33e-19!43;CL:0000223!1.54e-15!59;CL:0000548!8.29e-10!679;CL:0000004!8.29e-10!679;CL:0000255!8.29e-10!679;CL:0000012!3.40e-09!682;CL:0000076!4.71e-09!62;CL:0002368!1.99e-08!13;CL:0002251!9.90e-08!21 | |ontology_enrichment_celltype=CL:0000066!1.94e-42!254;CL:0002321!6.46e-25!248;CL:0000220!9.61e-25!246;CL:0002076!5.33e-19!43;CL:0000223!1.54e-15!59;CL:0000548!8.29e-10!679;CL:0000004!8.29e-10!679;CL:0000255!8.29e-10!679;CL:0000012!3.40e-09!682;CL:0000076!4.71e-09!62;CL:0002368!1.99e-08!13;CL:0002251!9.90e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.96e-16;42!CL:0002368;9.76e-10;13!CL:1000507;3.92e-08;10!CL:1000494;3.92e-08;10!CL:0002251;7.45e-08;20!CL:1000497;1.31e-07;17!CL:0002518;1.31e-07;17!CL:0002202;4.76e-07;9!CL:0002632;4.76e-07;9 | |ontology_enrichment_celltype_v019=CL:0002076;4.96e-16;42!CL:0002368;9.76e-10;13!CL:1000507;3.92e-08;10!CL:1000494;3.92e-08;10!CL:0002251;7.45e-08;20!CL:1000497;1.31e-07;17!CL:0002518;1.31e-07;17!CL:0002202;4.76e-07;9!CL:0002632;4.76e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.83e-47,253;CL:0002321,1.70e-23,250;CL:0002076,5.67e-21,42;CL:0000223,2.59e-16,58;CL:0000076,5.63e-10,63;CL:0002368,1.35e-09,13;CL:1000507,4.20e-08,10;CL:1000494,4.20e-08,10;CL:0002251,6.73e-08,20;CL:1000497,1.22e-07,17;CL:0002518,1.22e-07,17;CL:0002202,6.29e-07,9;CL:0002632,6.29e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;4.86e-09;58 | |ontology_enrichment_development_v019=CL:0000223;4.86e-09;58 | ||
|ontology_enrichment_disease=DOID:305!5.86e-17!106;DOID:0050687!1.62e-11!143;DOID:299!6.75e-07!25;DOID:1749!8.28e-07!14 | |ontology_enrichment_disease=DOID:305!5.86e-17!106;DOID:0050687!1.62e-11!143;DOID:299!6.75e-07!25;DOID:1749!8.28e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;1.03e-07;25!DOID:1749;4.79e-07;14 | |ontology_enrichment_disease_v019=DOID:299;1.03e-07;25!DOID:1749;4.79e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,7.21e-18,106;DOID:0050687,1.10e-11,143;DOID:299,1.22e-07,25;DOID:1749,4.85e-07,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;2.13e-08;30!UBERON:0001008;2.13e-08;30!UBERON:0004211;3.92e-08;10!UBERON:0009773;3.92e-08;10!UBERON:0001231;3.92e-08;10!UBERON:0004810;3.92e-08;10!UBERON:0007196;7.13e-08;15!UBERON:0001558;7.13e-08;15!UBERON:0003100;8.08e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0006554;2.13e-08;30!UBERON:0001008;2.13e-08;30!UBERON:0004211;3.92e-08;10!UBERON:0009773;3.92e-08;10!UBERON:0001231;3.92e-08;10!UBERON:0004810;3.92e-08;10!UBERON:0007196;7.13e-08;15!UBERON:0001558;7.13e-08;15!UBERON:0003100;8.08e-07;41 | ||
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| ||
|short_description=p7@S100A16 | |short_description=p7@S100A16 | ||
}} | }} |
Latest revision as of 06:31, 17 September 2015
Short description: | p7@S100A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_S100A16_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 0bp_to_ENST00000368706_5end |
EntrezGene: | S100A16 |
HGNC: | 20441 |
UniProt: | Q96FQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.83e-47 | 253 |
embryonic cell | 1.70e-23 | 250 |
endo-epithelial cell | 5.67e-21 | 42 |
endodermal cell | 2.59e-16 | 58 |
squamous epithelial cell | 5.63e-10 | 63 |
respiratory epithelial cell | 1.35e-09 | 13 |
kidney tubule cell | 4.20e-08 | 10 |
nephron tubule epithelial cell | 4.20e-08 | 10 |
epithelial cell of alimentary canal | 6.73e-08 | 20 |
kidney cell | 1.22e-07 | 17 |
kidney epithelial cell | 1.22e-07 | 17 |
epithelial cell of tracheobronchial tree | 6.29e-07 | 9 |
epithelial cell of lower respiratory tract | 6.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.01e-13 | 160 |
endoderm | 5.01e-13 | 160 |
presumptive endoderm | 5.01e-13 | 160 |
trunk | 1.50e-11 | 199 |
respiratory system | 7.04e-11 | 74 |
respiratory tract | 1.02e-09 | 54 |
embryo | 3.02e-09 | 592 |
segment of respiratory tract | 4.73e-09 | 47 |
renal system | 9.49e-09 | 48 |
urinary system structure | 1.05e-08 | 47 |
digestive system | 1.56e-08 | 145 |
digestive tract | 1.56e-08 | 145 |
primitive gut | 1.56e-08 | 145 |
head | 1.78e-08 | 56 |
female organism | 2.71e-08 | 41 |
nephron tubule epithelium | 4.20e-08 | 10 |
tracheobronchial tree | 5.97e-08 | 15 |
lower respiratory tract | 5.97e-08 | 15 |
anterior region of body | 6.01e-08 | 62 |
craniocervical region | 6.01e-08 | 62 |
unilaminar epithelium | 8.70e-08 | 148 |
ectodermal placode | 1.07e-07 | 31 |
extraembryonic membrane | 1.26e-07 | 14 |
membranous layer | 1.26e-07 | 14 |
subdivision of head | 1.33e-07 | 49 |
developing anatomical structure | 1.74e-07 | 581 |
trunk region element | 2.13e-07 | 101 |
primordium | 2.25e-07 | 160 |
multilaminar epithelium | 2.45e-07 | 83 |
surface structure | 4.62e-07 | 99 |
epithelium | 7.15e-07 | 306 |
respiratory primordium | 9.45e-07 | 38 |
endoderm of foregut | 9.45e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.21e-18 | 106 |
cell type cancer | 1.10e-11 | 143 |
adenocarcinoma | 1.22e-07 | 25 |
squamous cell carcinoma | 4.85e-07 | 14 |