FFCP PHASE1:Hg19::chr15:34610962..34611039,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9990 | |EntrezGene=9990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |HGNC=10914 | ||
|TSSclassifier=strong | |||
|UniProt=A0AV76,Q9UHW9 | |UniProt=A0AV76,Q9UHW9 | ||
|association_with_transcript=0bp_to_ENST00000290209,NM_005135,uc001zhv.2_5end | |association_with_transcript=0bp_to_ENST00000290209,NM_005135,uc001zhv.2_5end | ||
|cluster_id=chr15:34610962..34611039,- | |||
|description=CAGE_peak_1_at_SLC12A6_5end | |description=CAGE_peak_1_at_SLC12A6_5end | ||
|id=chr15:34610962..34611039,- | |id=chr15:34610962..34611039,- | ||
|ontology_enrichment_celltype=CL:0000037!4.80e-16!172;CL:0000566!4.80e-16!172;CL:0002032!8.07e-16!165;CL:0000837!8.07e-16!165;CL:0000738!1.48e-13!140;CL:0000988!1.61e-13!182;CL:0002031!9.50e-12!124;CL:0000763!5.58e-11!112;CL:0000049!5.58e-11!112;CL:0002087!1.53e-10!119;CL:0000766!1.65e-08!76;CL:0000557!2.78e-07!71;CL:0000839!5.13e-07!70 | |ontology_enrichment_celltype=CL:0000037!4.80e-16!172;CL:0000566!4.80e-16!172;CL:0002032!8.07e-16!165;CL:0000837!8.07e-16!165;CL:0000738!1.48e-13!140;CL:0000988!1.61e-13!182;CL:0002031!9.50e-12!124;CL:0000763!5.58e-11!112;CL:0000049!5.58e-11!112;CL:0002087!1.53e-10!119;CL:0000766!1.65e-08!76;CL:0000557!2.78e-07!71;CL:0000839!5.13e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.42e-09;33!CL:0002057;2.42e-09;33!CL:0000473;3.22e-08;39!CL:0000234;3.22e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.71e-16,168;CL:0002032,7.76e-16,161;CL:0000837,7.76e-16,161;CL:0000988,7.62e-14,177;CL:0000738,1.32e-13,136;CL:0002031,8.42e-12,120;CL:0000763,6.42e-11,108;CL:0000049,6.42e-11,108;CL:0002087,1.39e-10,115;CL:0000766,1.69e-08,72;CL:0000557,2.95e-07,67;CL:0000839,5.49e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.98e-08!112;UBERON:0002390!9.07e-08!102;UBERON:0003061!9.07e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.88e-08,108;UBERON:0002390,8.66e-08,98;UBERON:0003061,8.66e-08,98 | |||
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| ||
|short_description=p1@SLC12A6 | |short_description=p1@SLC12A6 | ||
}} | }} |
Latest revision as of 06:31, 17 September 2015
Short description: | p1@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC12A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000290209, NM_005135, uc001zhv.2_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | A0AV76Q9UHW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.71e-16 | 168 |
hematopoietic oligopotent progenitor cell | 7.76e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.76e-16 | 161 |
hematopoietic cell | 7.62e-14 | 177 |
leukocyte | 1.32e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 8.42e-12 | 120 |
myeloid cell | 6.42e-11 | 108 |
common myeloid progenitor | 6.42e-11 | 108 |
nongranular leukocyte | 1.39e-10 | 115 |
myeloid leukocyte | 1.69e-08 | 72 |
granulocyte monocyte progenitor cell | 2.95e-07 | 67 |
myeloid lineage restricted progenitor cell | 5.49e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.88e-08 | 108 |
hematopoietic system | 8.66e-08 | 98 |
blood island | 8.66e-08 | 98 |