FFCP PHASE1:Hg19::chr17:7155775..7155788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23399 | |EntrezGene=23399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19085 | |HGNC=19085 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-375bp_to_uc002gff.2_5end | |association_with_transcript=-375bp_to_uc002gff.2_5end | ||
|cluster_id=chr17:7155775..7155788,- | |||
|description=CAGE_peak_11_at_CTDNEP1_5end | |description=CAGE_peak_11_at_CTDNEP1_5end | ||
|id=chr17:7155775..7155788,- | |id=chr17:7155775..7155788,- | ||
|ontology_enrichment_celltype=CL:0002087!2.67e-15!119;CL:0000738!4.64e-15!140;CL:0002031!7.07e-14!124;CL:0000860!6.84e-11!45;CL:0000037!1.84e-10!172;CL:0000566!1.84e-10!172;CL:0000988!2.03e-10!182;CL:0000945!3.84e-10!24;CL:0000826!3.84e-10!24;CL:0002057!5.03e-10!42;CL:0000838!6.71e-10!52;CL:0000542!1.78e-09!53;CL:0000051!1.78e-09!53;CL:0002032!3.80e-09!165;CL:0000837!3.80e-09!165;CL:0000236!6.38e-08!14 | |ontology_enrichment_celltype=CL:0002087!2.67e-15!119;CL:0000738!4.64e-15!140;CL:0002031!7.07e-14!124;CL:0000860!6.84e-11!45;CL:0000037!1.84e-10!172;CL:0000566!1.84e-10!172;CL:0000988!2.03e-10!182;CL:0000945!3.84e-10!24;CL:0000826!3.84e-10!24;CL:0002057!5.03e-10!42;CL:0000838!6.71e-10!52;CL:0000542!1.78e-09!53;CL:0000051!1.78e-09!53;CL:0002032!3.80e-09!165;CL:0000837!3.80e-09!165;CL:0000236!6.38e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.64e-13;13!CL:0002188;1.96e-12;5!CL:0000623;5.60e-10;3!CL:1000746;5.00e-09;7!CL:1000612;5.00e-09;7!CL:0000037;2.70e-08;1!CL:0001024;2.70e-08;1!CL:0000222;6.40e-08;1!CL:0000542;2.66e-07;53!CL:0000945;7.45e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.08e-12,5;CL:0000236,3.61e-12,14;CL:0000838,2.61e-11,52;CL:0000542,4.60e-11,53;CL:0000051,4.60e-11,53;CL:0000623,6.57e-10,3;CL:0000825,6.57e-10,3;CL:1000746,5.23e-09,7;CL:1000612,5.23e-09,7;CL:0001024,3.11e-08,1;CL:0000738,4.45e-08,136;CL:0002087,2.74e-07,115;CL:0000037,5.07e-07,168;CL:0000945,5.36e-07,24;CL:0000826,5.36e-07,24;CL:0002031,6.88e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.66e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;5.00e-09;7!UBERON:0001229;5.00e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,5.23e-09,7;UBERON:0000074,5.23e-09,7;UBERON:0001229,5.23e-09,7;UBERON:0001230,5.23e-09,7;UBERON:0003220,5.23e-09,7;UBERON:0005749,5.23e-09,7;UBERON:0004199,5.23e-09,7;UBERON:0004209,5.23e-09,7;UBERON:0004198,5.23e-09,7;UBERON:0005103,6.11e-08,8;UBERON:0000083,6.11e-08,8;UBERON:0009201,6.11e-08,8;UBERON:0006553,6.11e-08,8;UBERON:0003074,6.11e-08,8;UBERON:0003060,6.11e-08,8;UBERON:0000080,4.16e-07,9;UBERON:0002120,4.16e-07,9;UBERON:0004875,4.16e-07,9;UBERON:0005721,4.16e-07,9;UBERON:0005754,4.16e-07,9;UBERON:0007297,4.16e-07,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0,0,0.0764134057479513,0.328402357799783,0.314843125254717,1.57345710739562,0,0.77408061658038,0.919421224478927,0.30120591877825,0,0.387336002901508,0.142169232487422,2.05520307534393,0,0.601633342410425,1.30206522429511,0,0,0,0.145398238779565,0.755751887377619,0,0,0,1.54853185447552,0.575384784644301,0,0.709446689665756,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0.622822248995575,1.00499466102697,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,0,0.422510572623884,0.212604299965044,0.419317291016752,0.336985893439485,0.600707571366025,0.32145117339416,0.855038231223746,0.39783335439818,0.730656615058536,1.75996244461323,0.546138611262131,0.889509253863555,0,0.800791974072025,0.574752439954483,0,1.90810750907073,2.84606484554724,1.76171156811282,4.20500550937752,1.32171328579026,1.68152568894461,0.263384084775077,0,1.17903228824749,2.87842098599313,0.334372990781356,0,0,3.89653456815823,0,0.294605907474837,0.664601683750863,0.270803863765016,0.25618263945135,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0.506039384039006,0,0,0,0,0,0,0,0,0.604820229674197,1.33720097891754,0.868946423296794,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0,0,0,0.175669571386252,0.130979075497713,0,1.11235332835329,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0.694281003215189,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0,3.06633274931766,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0.326923806226917,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0,0.515281080091258,0,0,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0,0,5.13217338068116,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,1.08524321078289,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.448340575974109,0.394061520403854,1.2937654491571,2.56686072559497,0.508189248444927,0,0.773288812777695,0,0,0,2.99161459204025,0.414415513436035,0.24538298343828,0,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0.686286847621712,0,0.431428401637234,0.533637789017222,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,1.56989728039846,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0.28853842595289,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0.556812347790485,0,0,0,0,0.37428108081644,0,0,0.222886768554957,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0,0.113942055847001,0,0.269272933229316,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0,0,0.889563386041866,0,0,0,0.802577647298789,0,0.364909578431332,0,0,0,0,0,0.063186579628488,3.90840890477681,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.292357268344742,0.328461828212837,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0.343609788497747,0,0.14405479798815,0.124252535565433,0.235694034616795,0.135904206073614,0.313808538937,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0.223171457441873,0,0,0,0.315132729228895,0.24724757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| ||
|short_description=p11@CTDNEP1 | |short_description=p11@CTDNEP1 | ||
}} | }} |
Latest revision as of 06:17, 17 September 2015
Short description: | p11@CTDNEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CTDNEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -375bp_to_uc002gff.2_5end |
EntrezGene: | CTDNEP1 |
HGNC: | 19085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.08e-12 | 5 |
B cell | 3.61e-12 | 14 |
lymphoid lineage restricted progenitor cell | 2.61e-11 | 52 |
lymphocyte | 4.60e-11 | 53 |
common lymphoid progenitor | 4.60e-11 | 53 |
natural killer cell | 6.57e-10 | 3 |
pro-NK cell | 6.57e-10 | 3 |
glomerular cell | 5.23e-09 | 7 |
kidney corpuscule cell | 5.23e-09 | 7 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.11e-08 | 1 |
leukocyte | 4.45e-08 | 136 |
nongranular leukocyte | 2.74e-07 | 115 |
hematopoietic stem cell | 5.07e-07 | 168 |
lymphocyte of B lineage | 5.36e-07 | 24 |
pro-B cell | 5.36e-07 | 24 |
hematopoietic lineage restricted progenitor cell | 6.88e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 5.23e-09 | 7 |
renal glomerulus | 5.23e-09 | 7 |
renal corpuscle | 5.23e-09 | 7 |
glomerular capsule | 5.23e-09 | 7 |
metanephric mesenchyme | 5.23e-09 | 7 |
glomerular tuft | 5.23e-09 | 7 |
S-shaped body | 5.23e-09 | 7 |
renal vesicle | 5.23e-09 | 7 |
comma-shaped body | 5.23e-09 | 7 |
mesonephric epithelium | 6.11e-08 | 8 |
mesonephric tubule | 6.11e-08 | 8 |
nephric duct | 6.11e-08 | 8 |
renal duct | 6.11e-08 | 8 |
mesonephric duct | 6.11e-08 | 8 |
pronephric duct | 6.11e-08 | 8 |
mesonephros | 4.16e-07 | 9 |
pronephros | 4.16e-07 | 9 |
nephrogenic cord | 4.16e-07 | 9 |
pronephric mesoderm | 4.16e-07 | 9 |
rostral part of nephrogenic cord | 4.16e-07 | 9 |
presumptive pronephric mesoderm | 4.16e-07 | 9 |