FFCP PHASE1:Hg19::chr20:57464223..57464241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2778 | |EntrezGene=2778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |HGNC=4392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000474497,ENST00000480975_5end | |association_with_transcript=0bp_to_ENST00000474497,ENST00000480975_5end | ||
|cluster_id=chr20:57464223..57464241,+ | |||
|coexpression_cluster_id=C2623 | |||
|description=CAGE_peak_3_at_GNAS_5end | |description=CAGE_peak_3_at_GNAS_5end | ||
|id=chr20:57464223..57464241,+ | |id=chr20:57464223..57464241,+ | ||
|ontology_enrichment_celltype=CL:0000988!6.34e-27!182;CL:0000037!7.47e-27!172;CL:0000566!7.47e-27!172;CL:0000738!4.00e-26!140;CL:0002032!8.91e-25!165;CL:0000837!8.91e-25!165;CL:0002031!2.64e-24!124;CL:0002087!1.56e-23!119;CL:0000763!2.93e-13!112;CL:0000049!2.93e-13!112;CL:0000839!1.64e-12!70;CL:0002009!1.83e-12!65;CL:0000557!2.76e-12!71;CL:0000766!6.26e-12!76;CL:0002194!1.11e-11!63;CL:0000576!1.11e-11!63;CL:0000040!1.11e-11!63;CL:0000559!1.11e-11!63;CL:0000542!1.28e-11!53;CL:0000051!1.28e-11!53;CL:0000860!1.52e-11!45;CL:0000838!3.33e-11!52;CL:0002057!1.28e-10!42 | |ontology_enrichment_celltype=CL:0000988!6.34e-27!182;CL:0000037!7.47e-27!172;CL:0000566!7.47e-27!172;CL:0000738!4.00e-26!140;CL:0002032!8.91e-25!165;CL:0000837!8.91e-25!165;CL:0002031!2.64e-24!124;CL:0002087!1.56e-23!119;CL:0000763!2.93e-13!112;CL:0000049!2.93e-13!112;CL:0000839!1.64e-12!70;CL:0002009!1.83e-12!65;CL:0000557!2.76e-12!71;CL:0000766!6.26e-12!76;CL:0002194!1.11e-11!63;CL:0000576!1.11e-11!63;CL:0000040!1.11e-11!63;CL:0000559!1.11e-11!63;CL:0000542!1.28e-11!53;CL:0000051!1.28e-11!53;CL:0000860!1.52e-11!45;CL:0000838!3.33e-11!52;CL:0002057!1.28e-10!42 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.65e-07;53!CL:0000576;4.21e-07;48!CL:0002087;8.18e-07;104!CL:0000860;9.35e-07;33!CL:0002057;9.35e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.37e-26,177;CL:0000037,3.39e-26,168;CL:0000738,1.58e-25,136;CL:0002032,3.89e-24,161;CL:0000837,3.89e-24,161;CL:0002031,9.75e-24,120;CL:0002087,5.63e-23,115;CL:0000763,1.02e-12,108;CL:0000049,1.02e-12,108;CL:0000839,5.08e-12,66;CL:0002009,5.54e-12,61;CL:0000557,8.59e-12,67;CL:0000542,1.27e-11,53;CL:0000051,1.27e-11,53;CL:0000766,1.98e-11,72;CL:0000838,3.32e-11,52;CL:0002194,3.34e-11,59;CL:0000576,3.34e-11,59;CL:0000040,3.34e-11,59;CL:0000559,3.34e-11,59;CL:0000473,4.26e-11,48;CL:0000234,4.26e-11,48;CL:0000860,1.28e-10,42;CL:0002057,1.28e-10,42 | |||
|ontology_enrichment_development_v019=CL:0002057;9.13e-08;42!CL:0000051;1.65e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.99e-16!102;UBERON:0003061!1.99e-16!102;UBERON:0002193!1.31e-13!112;UBERON:0001474!1.15e-09!86;UBERON:0002371!1.70e-09!80;UBERON:0000178!2.00e-08!15;UBERON:0000179!2.00e-08!15;UBERON:0000463!2.00e-08!15;UBERON:0001737!3.32e-07!9;UBERON:0002405!6.24e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.99e-16!102;UBERON:0003061!1.99e-16!102;UBERON:0002193!1.31e-13!112;UBERON:0001474!1.15e-09!86;UBERON:0002371!1.70e-09!80;UBERON:0000178!2.00e-08!15;UBERON:0000179!2.00e-08!15;UBERON:0000463!2.00e-08!15;UBERON:0001737!3.32e-07!9;UBERON:0002405!6.24e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-08;15!UBERON:0000179;2.01e-08;15!UBERON:0000463;2.01e-08;15!UBERON:0001737;3.31e-07;9!UBERON:0001557;3.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.81e-16,98;UBERON:0003061,6.81e-16,98;UBERON:0002193,4.45e-13,108;UBERON:0001474,3.60e-09,82;UBERON:0002371,5.31e-09,76;UBERON:0000178,2.00e-08,15;UBERON:0000179,2.00e-08,15;UBERON:0000463,2.00e-08,15;UBERON:0002405,5.12e-08,93;UBERON:0004765,3.02e-07,90;UBERON:0001737,3.32e-07,9 | |||
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| ||
|short_description=p3@GNAS | |short_description=p3@GNAS | ||
}} | }} |
Latest revision as of 06:13, 17 September 2015
Short description: | p3@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNAS_5end |
Coexpression cluster: | C2623_pituitary_thyroid_neuroectodermal_leiomyoblastoma_large_small_Whole |
Association with transcript: | 0bp_to_ENST00000474497, ENST00000480975_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.37e-26 | 177 |
hematopoietic stem cell | 3.39e-26 | 168 |
leukocyte | 1.58e-25 | 136 |
hematopoietic oligopotent progenitor cell | 3.89e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.89e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 9.75e-24 | 120 |
nongranular leukocyte | 5.63e-23 | 115 |
myeloid cell | 1.02e-12 | 108 |
common myeloid progenitor | 1.02e-12 | 108 |
myeloid lineage restricted progenitor cell | 5.08e-12 | 66 |
macrophage dendritic cell progenitor | 5.54e-12 | 61 |
granulocyte monocyte progenitor cell | 8.59e-12 | 67 |
lymphocyte | 1.27e-11 | 53 |
common lymphoid progenitor | 1.27e-11 | 53 |
myeloid leukocyte | 1.98e-11 | 72 |
lymphoid lineage restricted progenitor cell | 3.32e-11 | 52 |
monopoietic cell | 3.34e-11 | 59 |
monocyte | 3.34e-11 | 59 |
monoblast | 3.34e-11 | 59 |
promonocyte | 3.34e-11 | 59 |
defensive cell | 4.26e-11 | 48 |
phagocyte | 4.26e-11 | 48 |
classical monocyte | 1.28e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.81e-16 | 98 |
blood island | 6.81e-16 | 98 |
hemolymphoid system | 4.45e-13 | 108 |
bone element | 3.60e-09 | 82 |
bone marrow | 5.31e-09 | 76 |
blood | 2.00e-08 | 15 |
haemolymphatic fluid | 2.00e-08 | 15 |
organism substance | 2.00e-08 | 15 |
immune system | 5.12e-08 | 93 |
skeletal element | 3.02e-07 | 90 |
larynx | 3.32e-07 | 9 |