FFCP PHASE1:Hg19::chr8:1806877..1806888,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9639 | |EntrezGene=9639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14103 | |HGNC=14103 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-32bp_to_ENST00000382795,uc003wpt.2_5end | |association_with_transcript=-32bp_to_ENST00000382795,uc003wpt.2_5end | ||
|cluster_id=chr8:1806877..1806888,+ | |||
|coexpression_cluster_id=C98 | |coexpression_cluster_id=C98 | ||
|description=CAGE_peak_4_at_ARHGEF10_5end | |description=CAGE_peak_4_at_ARHGEF10_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000625!3.58e-33!11;CL:0000791!4.09e-24!18;CL:0000789!4.09e-24!18;CL:0002420!4.09e-24!18;CL:0002419!4.09e-24!18;CL:0000790!4.09e-24!18;CL:0000084!8.58e-17!25;CL:0000827!8.58e-17!25;CL:0000838!2.91e-10!52;CL:0000542!5.07e-10!53;CL:0000051!5.07e-10!53 | |ontology_enrichment_celltype=CL:0000625!3.58e-33!11;CL:0000791!4.09e-24!18;CL:0000789!4.09e-24!18;CL:0002420!4.09e-24!18;CL:0002419!4.09e-24!18;CL:0000790!4.09e-24!18;CL:0000084!8.58e-17!25;CL:0000827!8.58e-17!25;CL:0000838!2.91e-10!52;CL:0000542!5.07e-10!53;CL:0000051!5.07e-10!53 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.20e-81;11!CL:0000791;9.49e-50;18!CL:0000789;9.49e-50;18!CL:0002419;9.49e-50;18!CL:0000084;1.09e-35;25!CL:0000542;6.18e-09;53 | |ontology_enrichment_celltype_v019=CL:0000625;1.20e-81;11!CL:0000791;9.49e-50;18!CL:0000789;9.49e-50;18!CL:0002419;9.49e-50;18!CL:0000084;1.09e-35;25!CL:0000542;6.18e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,8.74e-82,11;CL:0000791,7.84e-50,18;CL:0000789,7.84e-50,18;CL:0002420,7.84e-50,18;CL:0002419,7.84e-50,18;CL:0000790,7.84e-50,18;CL:0000084,9.50e-36,25;CL:0000827,9.50e-36,25;CL:0000838,6.95e-17,52;CL:0000542,1.49e-16,53;CL:0000051,1.49e-16,53;CL:0002087,3.65e-07,115;CL:0002031,7.79e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;9.49e-50;18!CL:0000051;6.18e-09;53 | |ontology_enrichment_development_v019=CL:0000790;9.49e-50;18!CL:0000051;6.18e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.27e-18!15;UBERON:0000179!1.27e-18!15;UBERON:0000463!1.27e-18!15;UBERON:0007023!1.66e-14!115;UBERON:0002619!2.72e-13!22;UBERON:0002791!9.78e-13!33;UBERON:0001893!2.60e-12!34;UBERON:0001950!1.33e-11!20;UBERON:0000956!1.39e-11!25;UBERON:0000203!1.39e-11!25;UBERON:0001869!7.26e-11!32;UBERON:0002020!3.84e-10!34;UBERON:0003528!3.84e-10!34;UBERON:0002780!6.53e-10!41;UBERON:0001890!6.53e-10!41;UBERON:0006240!6.53e-10!41;UBERON:0003080!1.24e-09!42;UBERON:0001049!1.62e-09!57;UBERON:0005068!1.62e-09!57;UBERON:0006241!1.62e-09!57;UBERON:0007135!1.62e-09!57;UBERON:0002616!4.11e-09!59;UBERON:0000955!1.36e-08!69;UBERON:0006238!1.36e-08!69;UBERON:0001017!5.14e-08!82;UBERON:0005743!1.63e-07!86;UBERON:0003056!2.60e-07!61 | |ontology_enrichment_uberon=UBERON:0000178!1.27e-18!15;UBERON:0000179!1.27e-18!15;UBERON:0000463!1.27e-18!15;UBERON:0007023!1.66e-14!115;UBERON:0002619!2.72e-13!22;UBERON:0002791!9.78e-13!33;UBERON:0001893!2.60e-12!34;UBERON:0001950!1.33e-11!20;UBERON:0000956!1.39e-11!25;UBERON:0000203!1.39e-11!25;UBERON:0001869!7.26e-11!32;UBERON:0002020!3.84e-10!34;UBERON:0003528!3.84e-10!34;UBERON:0002780!6.53e-10!41;UBERON:0001890!6.53e-10!41;UBERON:0006240!6.53e-10!41;UBERON:0003080!1.24e-09!42;UBERON:0001049!1.62e-09!57;UBERON:0005068!1.62e-09!57;UBERON:0006241!1.62e-09!57;UBERON:0007135!1.62e-09!57;UBERON:0002616!4.11e-09!59;UBERON:0000955!1.36e-08!69;UBERON:0006238!1.36e-08!69;UBERON:0001017!5.14e-08!82;UBERON:0005743!1.63e-07!86;UBERON:0003056!2.60e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-33;15!UBERON:0000179;1.60e-33;15!UBERON:0000463;1.60e-33;15!UBERON:0002390;1.02e-14;32!UBERON:0002193;4.59e-09;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-33;15!UBERON:0000179;1.60e-33;15!UBERON:0000463;1.60e-33;15!UBERON:0002390;1.02e-14;32!UBERON:0002193;4.59e-09;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.90e-33,15;UBERON:0000179,1.90e-33,15;UBERON:0000463,1.90e-33,15 | |||
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| ||
|short_description=p4@ARHGEF10 | |short_description=p4@ARHGEF10 | ||
}} | }} |
Latest revision as of 06:10, 17 September 2015
Short description: | p4@ARHGEF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGEF10_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -32bp_to_ENST00000382795, uc003wpt.2_5end |
EntrezGene: | ARHGEF10 |
HGNC: | 14103 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 8.74e-82 | 11 |
mature alpha-beta T cell | 7.84e-50 | 18 |
alpha-beta T cell | 7.84e-50 | 18 |
immature T cell | 7.84e-50 | 18 |
mature T cell | 7.84e-50 | 18 |
immature alpha-beta T cell | 7.84e-50 | 18 |
T cell | 9.50e-36 | 25 |
pro-T cell | 9.50e-36 | 25 |
lymphoid lineage restricted progenitor cell | 6.95e-17 | 52 |
lymphocyte | 1.49e-16 | 53 |
common lymphoid progenitor | 1.49e-16 | 53 |
nongranular leukocyte | 3.65e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.79e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.90e-33 | 15 |
haemolymphatic fluid | 1.90e-33 | 15 |
organism substance | 1.90e-33 | 15 |