FFCP PHASE1:Hg19::chr1:26869092..26869108,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6195 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10430 | |||
|TSSclassifier=strong | |||
|UniProt=E9PRI4 | |||
|association_with_transcript=-494bp_to_ENST00000530003_5end | |||
|cluster_id=chr1:26869092..26869108,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_RPS6KA1_5end | |||
|id=chr1:26869092..26869108,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.30e-72!76;CL:0000738!8.09e-67!140;CL:0000988!3.87e-66!182;CL:0000037!5.03e-66!172;CL:0000566!5.03e-66!172;CL:0002057!2.14e-64!42;CL:0000839!5.11e-61!70;CL:0002032!7.25e-61!165;CL:0000837!7.25e-61!165;CL:0000763!1.39e-60!112;CL:0000049!1.39e-60!112;CL:0000860!3.85e-59!45;CL:0000557!1.41e-57!71;CL:0002194!1.29e-56!63;CL:0000576!1.29e-56!63;CL:0000040!1.29e-56!63;CL:0000559!1.29e-56!63;CL:0002031!2.00e-54!124;CL:0002009!2.14e-54!65;CL:0002087!4.16e-54!119;CL:0000134!1.73e-18!358;CL:0002320!1.16e-17!365;CL:0000219!8.87e-15!390;CL:0002393!4.41e-13!9;CL:0002397!4.41e-13!9;CL:0000094!6.58e-12!8;CL:0000048!7.01e-12!430;CL:0000723!2.15e-11!436;CL:0000034!9.07e-11!444;CL:0000081!1.44e-10!11;CL:0000080!8.76e-10!6;CL:0000775!4.15e-07!3;CL:0000875!9.48e-07!3;CL:0002396!9.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-51;33!CL:0002057;1.24e-51;33!CL:0000576;2.73e-43;48!CL:0000473;2.21e-36;39!CL:0000234;2.21e-36;39!CL:0000766;3.21e-36;69!CL:0000094;1.51e-25;8!CL:0000081;2.67e-18;11!CL:0002393;1.21e-16;6!CL:0002397;1.21e-16;6!CL:0000763;9.85e-16;100!CL:0000775;4.31e-14;3!CL:0000875;4.70e-13;3!CL:0002396;4.70e-13;3!CL:0002087;1.14e-12;104!CL:0000738;2.99e-10;136!CL:0000771;4.64e-10;2!CL:0000988;5.82e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-84,42;CL:0002057,1.13e-84,42;CL:0000473,3.70e-73,48;CL:0000234,3.70e-73,48;CL:0000766,3.81e-72,72;CL:0002194,4.88e-57,59;CL:0000576,4.88e-57,59;CL:0000040,4.88e-57,59;CL:0000559,4.88e-57,59;CL:0002009,5.88e-55,61;CL:0000839,2.67e-50,66;CL:0000557,1.89e-49,67;CL:0000763,1.75e-45,108;CL:0000049,1.75e-45,108;CL:0000738,1.84e-43,136;CL:0002087,2.23e-34,115;CL:0000037,1.64e-33,168;CL:0002032,2.65e-33,161;CL:0000837,2.65e-33,161;CL:0000988,2.34e-31,177;CL:0002031,2.05e-30,120;CL:0002393,3.61e-28,9;CL:0002397,3.61e-28,9;CL:0000094,1.64e-25,8;CL:0000081,2.82e-18,11;CL:0000775,4.32e-14,3;CL:0000875,2.76e-13,3;CL:0002396,2.76e-13,3;CL:0000134,3.67e-11,354;CL:0002320,9.07e-11,361;CL:0000771,4.65e-10,2;CL:0000219,2.18e-09,386;CL:0000048,1.05e-07,427;CL:0000723,1.80e-07,433;CL:0000034,3.58e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.32e-63;42!CL:0000049;1.60e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.09e-67!102;UBERON:0003061!4.09e-67!102;UBERON:0002193!2.95e-61!112;UBERON:0002371!2.81e-53!80;UBERON:0001474!2.35e-48!86;UBERON:0004765!3.68e-40!101;UBERON:0001434!3.68e-40!101;UBERON:0002405!2.67e-33!115;UBERON:0003081!1.50e-22!216;UBERON:0000178!2.37e-21!15;UBERON:0000179!2.37e-21!15;UBERON:0000463!2.37e-21!15;UBERON:0002204!1.77e-18!167;UBERON:0002384!1.53e-16!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.74e-17;15!UBERON:0000179;7.74e-17;15!UBERON:0000463;7.74e-17;15!UBERON:0002390;4.81e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.88e-54,98;UBERON:0003061,5.88e-54,98;UBERON:0002193,3.30e-48,108;UBERON:0002371,8.43e-43,76;UBERON:0001474,3.61e-39,82;UBERON:0004765,4.51e-35,90;UBERON:0002405,1.02e-33,93;UBERON:0001434,7.27e-31,100;UBERON:0003081,1.10e-21,203;UBERON:0000178,6.62e-17,15;UBERON:0000179,6.62e-17,15;UBERON:0000463,6.62e-17,15;UBERON:0002204,1.23e-15,167;UBERON:0000926,6.49e-11,315;UBERON:0004120,6.49e-11,315;UBERON:0006603,6.49e-11,315;UBERON:0002384,3.11e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.236132343941038,1.18009283054671,0,1.70297735647684,0,0,0,0,0,0.293600439334847,0,1.60435557976113,1.95309783644267,0,0,0.257575567634187,0.581592955118259,0.377875943688809,0.485168122375632,2.09186133215116,1.23350366406548,0.929119112685311,4.60307827715441,2.81776777182011,4.25668013799453,0.344745680736619,1.29096936716765,2.70852973188684,1.31769637679823,0.272906150057846,1.79778787556068,0.306083892370903,1.28371610830437,1.27867425159808,4.28806690242731,2.59302754908121,2.55734850319616,0.580418477257168,0.56738522469114,0.622822248995575,1.25624332628372,1.0429658368404,1.52032191293582,1.21079900526674,1.10483290796269,1.89877432464531,1.47878700418359,6.59073329891635,2.51590374610051,3.36985893439485,2.55300717830561,1.44653028027372,3.99017841237748,3.58050018958362,1.82664153764634,0,0.546138611262131,0,1.28019066769952,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.301150238155546,0.127986611154418,2.49861453104692,0.473554504088034,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.0299711487859,62.0448422637321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.864719720501769,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,1.41177339907723,0,0,0,0,0,26.9642528620986,17.9496875522415,31.0811635077027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.45142721309787,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,3.04468565539302,3.82318603571188,1.70894156152249,0.714695326373367,2.87953591160336,12.3209929126616,6.48037724685738,3.17250070517708,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.338583555603207,0.642352300414798,0.605399121573143,0,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.370691816839509,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0.320075189082423,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@RPS6KA1 | |||
}} |
Latest revision as of 06:03, 17 September 2015
Short description: | p6@RPS6KA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RPS6KA1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -494bp_to_ENST00000530003_5end |
EntrezGene: | RPS6KA1 |
HGNC: | 10430 |
UniProt: | E9PRI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.88e-54 | 98 |
blood island | 5.88e-54 | 98 |
hemolymphoid system | 3.30e-48 | 108 |
bone marrow | 8.43e-43 | 76 |
bone element | 3.61e-39 | 82 |
skeletal element | 4.51e-35 | 90 |
immune system | 1.02e-33 | 93 |
skeletal system | 7.27e-31 | 100 |
lateral plate mesoderm | 1.10e-21 | 203 |
blood | 6.62e-17 | 15 |
haemolymphatic fluid | 6.62e-17 | 15 |
organism substance | 6.62e-17 | 15 |
musculoskeletal system | 1.23e-15 | 167 |
mesoderm | 6.49e-11 | 315 |
mesoderm-derived structure | 6.49e-11 | 315 |
presumptive mesoderm | 6.49e-11 | 315 |
connective tissue | 3.11e-10 | 371 |