FFCP PHASE1:Hg19::chr3:186714283..186714307,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-102bp_to_ENST00000485105_5end | |association_with_transcript=-102bp_to_ENST00000485105_5end | ||
|cluster_id=chr3:186714283..186714307,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_8_at_ST6GAL1_5end | |description=CAGE_peak_8_at_ST6GAL1_5end | ||
|id=chr3:186714283..186714307,+ | |id=chr3:186714283..186714307,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.17e-29!24;CL:0000826!6.17e-29!24;CL:0000236!7.36e-20!14;CL:0000738!2.37e-12!140;CL:0000542!5.12e-12!53;CL:0000051!5.12e-12!53;CL:0002087!1.02e-11!119;CL:0000840!1.34e-11!5;CL:0001029!1.34e-11!5;CL:0000838!4.29e-11!52;CL:0000451!2.11e-10!10;CL:0002031!2.43e-09!124;CL:0000037!1.35e-08!172;CL:0000566!1.35e-08!172;CL:0000988!1.55e-07!182;CL:0000990!2.16e-07!8;CL:0000784!1.00e-06!3 | |ontology_enrichment_celltype=CL:0000945!6.17e-29!24;CL:0000826!6.17e-29!24;CL:0000236!7.36e-20!14;CL:0000738!2.37e-12!140;CL:0000542!5.12e-12!53;CL:0000051!5.12e-12!53;CL:0002087!1.02e-11!119;CL:0000840!1.34e-11!5;CL:0001029!1.34e-11!5;CL:0000838!4.29e-11!52;CL:0000451!2.11e-10!10;CL:0002031!2.43e-09!124;CL:0000037!1.35e-08!172;CL:0000566!1.35e-08!172;CL:0000988!1.55e-07!182;CL:0000990!2.16e-07!8;CL:0000784!1.00e-06!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;5.33e-39;13!CL:0000945;2.69e-37;24!CL:0000840;3.39e-23;5!CL:0000451;5.96e-22;10!CL:0000990;2.81e-15;8!CL:0000784;7.23e-13;3!CL:0000542;1.16e-11;53!CL:0001014;6.63e-09;2!CL:0001016;6.63e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.14e-42,14;CL:0000945,2.44e-37,24;CL:0000826,2.44e-37,24;CL:0000840,1.87e-23,5;CL:0001029,1.87e-23,5;CL:0000451,3.95e-22,10;CL:0000542,5.78e-17,53;CL:0000051,5.78e-17,53;CL:0000738,1.61e-15,136;CL:0000990,1.91e-15,8;CL:0000838,2.96e-15,52;CL:0002087,2.20e-13,115;CL:0000784,7.70e-13,3;CL:0002031,1.09e-12,120;CL:0000037,2.26e-11,168;CL:0000988,1.76e-10,177;CL:0002032,5.08e-09,161;CL:0000837,5.08e-09,161;CL:0001014,5.53e-09,2;CL:0001016,5.53e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.16e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.58e-38!115;UBERON:0000178!2.23e-13!15;UBERON:0000179!2.23e-13!15;UBERON:0000463!2.23e-13!15;UBERON:0001893!5.91e-09!34;UBERON:0002780!7.75e-09!41;UBERON:0001890!7.75e-09!41;UBERON:0006240!7.75e-09!41;UBERON:0002619!1.25e-08!22;UBERON:0003080!1.59e-08!42;UBERON:0001049!2.25e-08!57;UBERON:0005068!2.25e-08!57;UBERON:0006241!2.25e-08!57;UBERON:0007135!2.25e-08!57;UBERON:0001950!2.96e-08!20;UBERON:0002791!4.08e-08!33;UBERON:0002616!6.48e-08!59;UBERON:0002193!9.88e-08!112;UBERON:0002020!1.22e-07!34;UBERON:0003528!1.22e-07!34;UBERON:0002390!1.26e-07!102;UBERON:0003061!1.26e-07!102;UBERON:0000955!1.93e-07!69;UBERON:0006238!1.93e-07!69;UBERON:0000956!2.63e-07!25;UBERON:0000203!2.63e-07!25;UBERON:0001869!3.25e-07!32;UBERON:0001871!5.30e-07!7;UBERON:0000200!7.68e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!8.58e-38!115;UBERON:0000178!2.23e-13!15;UBERON:0000179!2.23e-13!15;UBERON:0000463!2.23e-13!15;UBERON:0001893!5.91e-09!34;UBERON:0002780!7.75e-09!41;UBERON:0001890!7.75e-09!41;UBERON:0006240!7.75e-09!41;UBERON:0002619!1.25e-08!22;UBERON:0003080!1.59e-08!42;UBERON:0001049!2.25e-08!57;UBERON:0005068!2.25e-08!57;UBERON:0006241!2.25e-08!57;UBERON:0007135!2.25e-08!57;UBERON:0001950!2.96e-08!20;UBERON:0002791!4.08e-08!33;UBERON:0002616!6.48e-08!59;UBERON:0002193!9.88e-08!112;UBERON:0002020!1.22e-07!34;UBERON:0003528!1.22e-07!34;UBERON:0002390!1.26e-07!102;UBERON:0003061!1.26e-07!102;UBERON:0000955!1.93e-07!69;UBERON:0006238!1.93e-07!69;UBERON:0000956!2.63e-07!25;UBERON:0000203!2.63e-07!25;UBERON:0001869!3.25e-07!32;UBERON:0001871!5.30e-07!7;UBERON:0000200!7.68e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.60e-20;15!UBERON:0000179;8.60e-20;15!UBERON:0000463;8.60e-20;15!UBERON:0002390;2.29e-12;32!UBERON:0002193;6.22e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.13e-20,15;UBERON:0000179,8.13e-20,15;UBERON:0000463,8.13e-20,15;UBERON:0002193,4.69e-11,108;UBERON:0002390,6.29e-10,98;UBERON:0003061,6.29e-10,98;UBERON:0007023,4.01e-07,114 | |||
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| ||
|short_description=p8@ST6GAL1 | |short_description=p8@ST6GAL1 | ||
}} | }} |
Latest revision as of 06:01, 17 September 2015
Short description: | p8@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ST6GAL1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -102bp_to_ENST00000485105_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.14e-42 | 14 |
lymphocyte of B lineage | 2.44e-37 | 24 |
pro-B cell | 2.44e-37 | 24 |
immature conventional dendritic cell | 1.87e-23 | 5 |
common dendritic progenitor | 1.87e-23 | 5 |
dendritic cell | 3.95e-22 | 10 |
lymphocyte | 5.78e-17 | 53 |
common lymphoid progenitor | 5.78e-17 | 53 |
leukocyte | 1.61e-15 | 136 |
conventional dendritic cell | 1.91e-15 | 8 |
lymphoid lineage restricted progenitor cell | 2.96e-15 | 52 |
nongranular leukocyte | 2.20e-13 | 115 |
plasmacytoid dendritic cell | 7.70e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 1.09e-12 | 120 |
hematopoietic stem cell | 2.26e-11 | 168 |
hematopoietic cell | 1.76e-10 | 177 |
hematopoietic oligopotent progenitor cell | 5.08e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-09 | 161 |
CD1a-positive Langerhans cell | 5.53e-09 | 2 |
immature CD1a-positive Langerhans cell | 5.53e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.13e-20 | 15 |
haemolymphatic fluid | 8.13e-20 | 15 |
organism substance | 8.13e-20 | 15 |
hemolymphoid system | 4.69e-11 | 108 |
hematopoietic system | 6.29e-10 | 98 |
blood island | 6.29e-10 | 98 |
adult organism | 4.01e-07 | 114 |