FFCP PHASE1:Hg19::chr11:20070889..20070900,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40743 | |HGNC=40743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000533767_5end | |association_with_transcript=-40bp_to_ENST00000533767_5end | ||
|cluster_id=chr11:20070889..20070900,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_NAV2-AS2_5end | |description=CAGE_peak_1_at_NAV2-AS2_5end | ||
|id=chr11:20070889..20070900,- | |id=chr11:20070889..20070900,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.56e-19;1!UBERON:0000358;2.71e-19;1!UBERON:0010227;2.71e-19;1!UBERON:0004140;2.71e-19;1!UBERON:0005062;4.29e-19;4!UBERON:0007284;4.29e-19;4!UBERON:0004874;5.13e-19;1!UBERON:0006603;3.23e-07;65 | |||
|ontology_enrichment_disease=DOID:114!3.53e-12!2;DOID:178!7.35e-07!1;DOID:326!7.35e-07!1;DOID:3978!7.35e-07!1;DOID:3394!7.35e-07!1;DOID:5844!7.35e-07!1 | |ontology_enrichment_disease=DOID:114!3.53e-12!2;DOID:178!7.35e-07!1;DOID:326!7.35e-07!1;DOID:3978!7.35e-07!1;DOID:3394!7.35e-07!1;DOID:5844!7.35e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:114;3.59e-37;2!DOID:178;2.71e-19;1!DOID:326;2.71e-19;1!DOID:3978;2.71e-19;1!DOID:3394;2.71e-19;1!DOID:5844;2.71e-19;1!DOID:1287;3.74e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.73e-37,2;DOID:178,2.25e-19,1;DOID:326,2.25e-19,1;DOID:3978,2.25e-19,1;DOID:3394,2.25e-19,1;DOID:5844,2.25e-19,1;DOID:1287,3.26e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.63e-17!115;UBERON:0007100!6.86e-12!27;UBERON:0000341!2.28e-11!2;UBERON:0003978!2.40e-08!3;UBERON:0009751!2.40e-08!3;UBERON:0000946!2.40e-08!3;UBERON:0002523!2.40e-08!3;UBERON:0005983!2.40e-08!3;UBERON:0002165!2.40e-08!3;UBERON:0002062!2.40e-08!3;UBERON:0007280!2.40e-08!3;UBERON:0004151!2.67e-08!3;UBERON:0002146!6.23e-07!1;UBERON:0005623!6.23e-07!1;UBERON:0002084!6.59e-07!1;UBERON:0002082!6.59e-07!1;UBERON:0004706!6.59e-07!1;UBERON:0002135!7.77e-07!1;UBERON:0002079!8.67e-07!1;UBERON:0000989!9.15e-07!1;UBERON:0008811!9.15e-07!1;UBERON:0006258!9.15e-07!1;UBERON:0005876!9.15e-07!1;UBERON:0004874!9.15e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.01e-45;25!UBERON:0003978;4.31e-25;3!UBERON:0000946;4.31e-25;3!UBERON:0004151;4.87e-25;3!UBERON:0000948;1.30e-20;22!UBERON:0002146;1.30e-19;1!UBERON:0005623;1.30e-19;1!UBERON:0002084;1.56e-19;1!UBERON:0002082;1.56e-19;1!UBERON:0002079;2.71e-19;1!UBERON:0002135;2.71e-19;1!UBERON:0000989;5.13e-19;1!UBERON:0008811;5.13e-19;1!UBERON:0002081;2.49e-10;2!UBERON:0002133;2.49e-10;2!UBERON:0001905;3.42e-10;2!UBERON:0002757;3.42e-10;2!UBERON:0010134;3.42e-10;2!UBERON:0005408;3.42e-10;2!UBERON:0001899;3.42e-10;2!UBERON:0003103;3.52e-09;61!UBERON:0010313;3.25e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.40e-42,27;UBERON:0003978,4.31e-25,3;UBERON:0009751,4.31e-25,3;UBERON:0000946,4.31e-25,3;UBERON:0002523,4.31e-25,3;UBERON:0005983,4.31e-25,3;UBERON:0002165,4.31e-25,3;UBERON:0002062,4.31e-25,3;UBERON:0007280,4.31e-25,3;UBERON:0004151,6.22e-25,3;UBERON:0002146,1.30e-19,1;UBERON:0005623,1.30e-19,1;UBERON:0002084,1.56e-19,1;UBERON:0002082,1.56e-19,1;UBERON:0010226,1.56e-19,1;UBERON:0002135,2.71e-19,1;UBERON:0002079,3.91e-19,1;UBERON:0000989,4.69e-19,1;UBERON:0008811,4.69e-19,1;UBERON:0006258,4.69e-19,1;UBERON:0005876,4.69e-19,1;UBERON:0004874,4.69e-19,1;UBERON:0000948,6.54e-19,24;UBERON:0005498,6.54e-19,24;UBERON:0004140,6.54e-19,24;UBERON:0009881,6.54e-19,24;UBERON:0004141,6.54e-19,24;UBERON:0003084,6.54e-19,24;UBERON:0007005,6.54e-19,24;UBERON:0004139,6.54e-19,24;UBERON:0004291,6.54e-19,24;UBERON:0003103,1.27e-16,68;UBERON:0007023,2.92e-12,114;UBERON:0004797,2.42e-11,7;UBERON:0002133,2.49e-10,2;UBERON:0002081,2.99e-10,2;UBERON:0010227,2.99e-10,2;UBERON:0001905,3.58e-10,2;UBERON:0002757,3.58e-10,2;UBERON:0010134,3.58e-10,2;UBERON:0005408,3.58e-10,2;UBERON:0001899,3.58e-10,2;UBERON:0001009,6.58e-10,112;UBERON:0010313,3.25e-08,10;UBERON:0002342,3.25e-08,10;UBERON:0005062,3.25e-08,10 | |||
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|short_description=p1@NAV2-AS2 | |short_description=p1@NAV2-AS2 | ||
}} | }} |
Latest revision as of 05:50, 17 September 2015
Short description: | p1@NAV2-AS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAV2-AS2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -40bp_to_ENST00000533767_5end |
EntrezGene: | NA |
HGNC: | 40743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.73e-37 | 2 |
vascular disease | 2.25e-19 | 1 |
ischemia | 2.25e-19 | 1 |
extrinsic cardiomyopathy | 2.25e-19 | 1 |
myocardial ischemia | 2.25e-19 | 1 |
myocardial infarction | 2.25e-19 | 1 |
cardiovascular system disease | 3.26e-19 | 4 |