FFCP PHASE1:Hg19::chr13:36920576..36920595,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23111 | |EntrezGene=23111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18514 | |HGNC=18514 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0X7 | |UniProt=Q8N0X7 | ||
|association_with_transcript=50bp_to_ENST00000423217,NM_001142296,NM_015087,uc001uvm.2,uc001uvn.2,uc001uvp.2_5end | |association_with_transcript=50bp_to_ENST00000423217,NM_001142296,NM_015087,uc001uvm.2,uc001uvn.2,uc001uvp.2_5end | ||
|cluster_id=chr13:36920576..36920595,- | |||
|description=CAGE_peak_6_at_SPG20_5end | |description=CAGE_peak_6_at_SPG20_5end | ||
|id=chr13:36920576..36920595,- | |id=chr13:36920576..36920595,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-17!115;UBERON:0001049!5.09e-09!57;UBERON:0005068!5.09e-09!57;UBERON:0006241!5.09e-09!57;UBERON:0007135!5.09e-09!57;UBERON:0002616!1.53e-08!59;UBERON:0000955!2.26e-07!69;UBERON:0006238!2.26e-07!69;UBERON:0000073!5.16e-07!94;UBERON:0001016!5.16e-07!94;UBERON:0001017!8.46e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!1.33e-17!115;UBERON:0001049!5.09e-09!57;UBERON:0005068!5.09e-09!57;UBERON:0006241!5.09e-09!57;UBERON:0007135!5.09e-09!57;UBERON:0002616!1.53e-08!59;UBERON:0000955!2.26e-07!69;UBERON:0006238!2.26e-07!69;UBERON:0000073!5.16e-07!94;UBERON:0001016!5.16e-07!94;UBERON:0001017!8.46e-07!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.87e-18,114;UBERON:0001049,6.41e-09,56;UBERON:0005068,6.41e-09,56;UBERON:0006241,6.41e-09,56;UBERON:0007135,6.41e-09,56;UBERON:0000073,3.48e-08,53;UBERON:0002616,3.48e-08,53 | |||
|phase1_expression=1.45342703416445,1.71280419112787,1.40954404095971,4.00293193412522,2.68176656656373,4.36169262050184,2.53299878168311,0,0.522371256399677,0,0,0,0.791300934685361,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0.975865597581014,0.123121058076788,1.02000345622126,0.313454721478088,0.85870796139317,0.547497700291537,0.627713197974014,0.382067028739756,0.656804715599566,0.472264687882075,0.393364276848904,0,0.619264493264304,0,1.204823675113,0,0,0,0.293600439334847,0,0.401088894940283,1.08505435357926,1.11957737119962,1.29557466407592,0.77272670290256,0.581592955118259,0.377875943688809,0.242584061187816,0.929716147622738,0.822335776043652,1.54853185447552,1.7261543539329,1.5369642391746,0.47296445977717,5.5159308917859,2.5819387343353,2.70852973188684,0.564727018627814,0.818718450173537,0.898893937780338,1.22433556948361,1.60464513538047,1.91801137739712,1.9791078011203,0.797854630486527,0.426224750532694,1.45104619314292,1.13477044938228,1.24564449799115,1.50749199154046,1.0429658368404,1.08594422352558,1.81619850790011,2.20966581592539,1.89877432464531,0.422510572623884,0,0.209658645508376,0.336985893439485,0.300353785683013,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,1.12101712596307,1.31692042387539,0.590129310341499,0.393010762749165,0.411202997999018,0.501559486172034,0,0.473447805734733,0,0,0,0,0,0,0.260118695119756,0.493313713811028,1.10540007114339,0,0,0,0,0.566546713487831,0.383220493601921,0.34362744548263,0,1.27426165729639,0.651083453856419,0.950452044448374,0.602300476311091,0.895906278080929,0,0.236777252044017,0,0,0,0.144824403882799,0,0.670700859703636,0.383587685530591,1.0843174571537,1.00267582127178,1.01392563272577,0.795285947051099,0.486634870302636,0.756278537312543,0,0.790513071238134,1.11332214173056,0,0,1.9472843619281,1.0447784237956,1.06366368415092,1.43094374583205,1.14398982156026,0.371457501329565,0.596287222100115,2.58070378531837,0.694281003215189,0.56530794192401,0.838998872419812,0.275118041940067,1.67195973229448,2.06733407335463,1.42306505074684,2.67776490211736,0.402829317109147,0.760272105718513,1.22031028774085,1.10298924103761,1.62028389576352,0.982297011124877,1.79623498100936,1.80178368773316,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,1.98788780678127,0.759783069987479,1.19168262731897,0.860509862246441,2.4826786753885,0,0,0,4.35695449559673,1.48181739276657,0.980771418680752,0.605429710579726,1.15235184896,0,1.24864030732128,1.1409436430889,1.19558944441441,0.587172493218824,0.161872944368132,0.561803226808994,2.85815839756851,0.368502951935304,2.37649296704261,2.37600571456411,0.247266929278557,0.910161361938026,0.718618141816238,1.0100166837244,0.750711119231785,1.6623846929051,0.438977620880838,0.919463387397059,1.35214253015937,0.453728732640084,0.179389635688862,0.85422955527427,0.423863802319124,0.300091096084402,0.92747276314595,1.03056216018252,0.744467425326359,1.35021065793013,0.584622030967192,0.757301322732344,0.644349290496095,1.13152239773168,1.42003837006646,0.906768884048762,0.339121184620975,0.193260853163297,0.272746120590835,1.14721838155602,0.365921118388786,0.265059536642971,0.348581828608555,1.24393266018445,0.504641701751257,0,3.12899064659632,0.643240938192885,0,0,2.16563844500876,0.591534000199219,1.01150814046861,0.482022059766964,0.882351781859152,0.871517776369625,0.474541238222193,0.808987848960987,0.392442930250692,0.38474715694639,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0.982827216677626,0,0,0,0.343135620597051,0.329250856225877,0,0.603173834469785,0.462942225792648,0.325808305310325,0,0,1.04337364477569,0.821860859650752,0.288732895522148,0.462985512576611,0.190254152234598,0,0.858486162094873,1.47730203652438,1.17002132569619,0.445893486866185,1.87467667973554,0.335964256397719,0.141775097242386,0.806026704325635,0.871901815541886,0.383382679165211,1.47798971368783,1.84901711427775,0.621984346622316,1.44119953416961,1.2624243342638,1.33345578013555,0.381988425558278,0,0,1.02827492703324,0.300343057843917,0.857479297891735,0.336393253036082,0.87192013766656,0.2933531432838,1.93907573636667,0,0.845302752556,1.32969058292435,0,0.514414748524284,1.41849132023278,0.266422179016099,1.42977993658148,2.17048642156577,0,0.977208552881205,0.710783897485092,0,0.301439377059586,0.871533458600294,0.699810938274399,3.64871341923571,0.502257091432126,2.10833939483032,0.718874566474748,3.44585807502342,0,0.868687840005475,1.84928690295345,1.25342674267927,0,0,0,0,1.27047312111232,0,0.773288812777695,0.670065061337395,0.637938751653163,0.749007023947182,0,0.414415513436035,1.71768088406796,0.500170521059677,0.813795071099207,1.24782516918484,0.713715955188647,0.946214490203608,1.99140405487612,0.300946099727719,0,3.10419213877515,0.664225598535437,0.368738337083406,0.781952530212746,0.195801157462741,1.71571711905428,0.413536052245775,0.647142602455851,0.21345511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| ||
|short_description=p6@SPG20 | |short_description=p6@SPG20 | ||
}} | }} |
Latest revision as of 05:48, 17 September 2015
Short description: | p6@SPG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPG20_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000423217, NM_001142296, NM_015087, uc001uvm.2, uc001uvn.2, uc001uvp.2_5end |
EntrezGene: | SPG20 |
HGNC: | 18514 |
UniProt: | Q8N0X7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.87e-18 | 114 |
neural tube | 6.41e-09 | 56 |
neural rod | 6.41e-09 | 56 |
future spinal cord | 6.41e-09 | 56 |
neural keel | 6.41e-09 | 56 |
regional part of nervous system | 3.48e-08 | 53 |
regional part of brain | 3.48e-08 | 53 |